RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 SPRP35270 261 aaPredicted RBP15.63■□□□□ 0.09
SDF4-207ENST00000494748 GLUD2P49448 558 aa15.63■□□□□ 0.09
SDF4-207ENST00000494748 HK2P52789 917 aa15.63■□□□□ 0.09
SDF4-207ENST00000494748 LIPMQ5VYY2 423 aa15.63■□□□□ 0.09
SDF4-207ENST00000494748 OR52K1Q8NGK4 314 aa15.63■□□□□ 0.09
SDF4-207ENST00000494748 EME1Q96AY2 570 aa15.63■□□□□ 0.09
SDF4-207ENST00000494748 ACE2Q9BYF1 805 aaPredicted RBP15.63■□□□□ 0.09
SDF4-207ENST00000494748 EBF1Q9UH73 591 aa15.63■□□□□ 0.09
SDF4-207ENST00000494748 BCAP29Q9UHQ4 241 aa15.63■□□□□ 0.09
SDF4-207ENST00000494748 SNX9Q9Y5X1 595 aa15.63■□□□□ 0.09
SDF4-207ENST00000494748 ARHGEF37A1IGU5 675 aa15.62■□□□□ 0.09
SDF4-207ENST00000494748 TMEM221A6NGB7 291 aa15.62■□□□□ 0.09
SDF4-207ENST00000494748 TMX2-CTNND1H3BSU7 103 aa15.62■□□□□ 0.09
SDF4-207ENST00000494748 CSPG5O95196 566 aa15.62■□□□□ 0.09
SDF4-207ENST00000494748 BMP10O95393 424 aa15.62■□□□□ 0.09
SDF4-207ENST00000494748 FGFR3P22607 806 aa15.62■□□□□ 0.09
SDF4-207ENST00000494748 CDH15P55291 814 aa15.62■□□□□ 0.09
SDF4-207ENST00000494748 TUBA4AP68366 448 aa15.62■□□□□ 0.09
SDF4-207ENST00000494748 PFKPQ01813 784 aa15.62■□□□□ 0.09
SDF4-207ENST00000494748 SLC10A6Q3KNW5 377 aa15.62■□□□□ 0.09
SDF4-207ENST00000494748 MTX3Q5HYI7 312 aa15.62■□□□□ 0.09
SDF4-207ENST00000494748 NHSL2Q5HYW2 709 aa15.62■□□□□ 0.09
SDF4-207ENST00000494748 TRIM50Q86XT4 487 aa15.62■□□□□ 0.09
SDF4-207ENST00000494748 MYO1HQ8N1T3 1032 aa15.62■□□□□ 0.09
SDF4-207ENST00000494748 FAM110BQ8TC76 370 aa15.62■□□□□ 0.09
SDF4-207ENST00000494748 ANKRD60Q9BZ19 345 aa15.62■□□□□ 0.09
SDF4-207ENST00000494748 C2orf40Q9H1Z8 148 aa15.62■□□□□ 0.09
SDF4-207ENST00000494748 EFCAB1Q9HAE3 211 aa15.62■□□□□ 0.09
SDF4-207ENST00000494748 ARHGEF38Q9NXL2 777 aa15.62■□□□□ 0.09
SDF4-207ENST00000494748 PPP1R1BQ9UD71 204 aaPredicted RBP15.62■□□□□ 0.09
SDF4-207ENST00000494748 SARDHQ9UL12 918 aa15.62■□□□□ 0.09
SDF4-207ENST00000494748 DLGAP1O14490 977 aa15.62■□□□□ 0.09
SDF4-207ENST00000494748 EGFRP00533 1210 aa15.62■□□□□ 0.09
SDF4-207ENST00000494748 CD97P48960 835 aa15.62■□□□□ 0.09
SDF4-207ENST00000494748 COG7P83436 770 aa15.62■□□□□ 0.09
SDF4-207ENST00000494748 RALGAPA2Q2PPJ7 1873 aa15.62■□□□□ 0.09
SDF4-207ENST00000494748 ANKDD1AQ495B1 522 aa15.62■□□□□ 0.09
SDF4-207ENST00000494748 TSTD2Q5T7W7 516 aa15.62■□□□□ 0.09
SDF4-207ENST00000494748 CPNE9Q8IYJ1 553 aa15.62■□□□□ 0.09
SDF4-207ENST00000494748 GFM2Q969S9 779 aaKnown RBP15.62■□□□□ 0.09
SDF4-207ENST00000494748 LPIN3Q9BQK8 851 aa15.62■□□□□ 0.09
SDF4-207ENST00000494748 FAM49BQ9NUQ9 324 aa15.62■□□□□ 0.09
SDF4-207ENST00000494748 TCRBV3S1A0A5B6 114 aa15.61■□□□□ 0.09
SDF4-207ENST00000494748 TRIM64A6NGJ6 449 aa15.61■□□□□ 0.09
SDF4-207ENST00000494748 XPO1O14980 1071 aaKnown RBP15.61■□□□□ 0.09
SDF4-207ENST00000494748 HNRNPCP07910 306 aaKnown RBP eCLIP15.61■□□□□ 0.09
SDF4-207ENST00000494748 PDGFRBP09619 1106 aa15.61■□□□□ 0.09
SDF4-207ENST00000494748 ARSAP15289 507 aa15.61■□□□□ 0.09
SDF4-207ENST00000494748 C6orf10Q5SRN2 563 aa15.61■□□□□ 0.09
SDF4-207ENST00000494748 KDM1BQ8NB78 822 aa15.61■□□□□ 0.09
SDF4-207ENST00000494748 TMA16Q96EY4 203 aaKnown RBP15.61■□□□□ 0.09
SDF4-207ENST00000494748 NT5C1AQ9BXI3 368 aa15.61■□□□□ 0.09
SDF4-207ENST00000494748 TEX13BQ9BXU2 312 aa15.61■□□□□ 0.09
SDF4-207ENST00000494748 IGSF9Q9P2J2 1179 aa15.61■□□□□ 0.09
SDF4-207ENST00000494748 TXNDC16Q9P2K2 825 aa15.61■□□□□ 0.09
SDF4-207ENST00000494748 AP4S1Q9Y587 144 aa15.61■□□□□ 0.09
SDF4-207ENST00000494748 TMEM233B4DJY2 109 aa15.61■□□□□ 0.09
SDF4-207ENST00000494748 E7ENX8 843 aa15.61■□□□□ 0.09
SDF4-207ENST00000494748 HTRA2O43464 458 aaPredicted RBP15.61■□□□□ 0.09
SDF4-207ENST00000494748 RHDQ02161 417 aa15.61■□□□□ 0.09
SDF4-207ENST00000494748 TRIM25Q14258 630 aaKnown RBP15.61■□□□□ 0.09
SDF4-207ENST00000494748 GK5Q6ZS86 529 aa15.61■□□□□ 0.09
SDF4-207ENST00000494748 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.61■□□□□ 0.095e-7■■■■□ 26.7
SDF4-207ENST00000494748 ZNF669Q96BR6 464 aaPredicted RBP15.61■□□□□ 0.09
SDF4-207ENST00000494748 OSBPL6Q9BZF3 934 aa15.61■□□□□ 0.09
SDF4-207ENST00000494748 TMPRSS4Q9NRS4 437 aa15.61■□□□□ 0.09
SDF4-207ENST00000494748 PNPLA3Q9NST1 481 aa15.61■□□□□ 0.09
SDF4-207ENST00000494748 KIAA1257Q9ULG3 409 aa15.61■□□□□ 0.09
SDF4-207ENST00000494748 FZD1Q9UP38 647 aa15.61■□□□□ 0.09
SDF4-207ENST00000494748 MYRFQ9Y2G1 1151 aa15.61■□□□□ 0.09
SDF4-207ENST00000494748 KCNU1A8MYU2 1149 aa15.61■□□□□ 0.09
SDF4-207ENST00000494748 BOLA2-SMG1P6H3BVE0 249 aa15.61■□□□□ 0.09
SDF4-207ENST00000494748 FBP2O00757 339 aa15.61■□□□□ 0.09
SDF4-207ENST00000494748 LRP8Q14114 963 aa15.61■□□□□ 0.09
SDF4-207ENST00000494748 AMHR2Q16671 573 aa15.61■□□□□ 0.09
SDF4-207ENST00000494748 TRAPPC12Q8WVT3 735 aa15.61■□□□□ 0.09
SDF4-207ENST00000494748 WRNIP1Q96S55 665 aa15.61■□□□□ 0.09
SDF4-207ENST00000494748 RRN3Q9NYV6 651 aa15.61■□□□□ 0.09
SDF4-207ENST00000494748 CDYLQ9Y232 598 aa15.61■□□□□ 0.09
SDF4-207ENST00000494748 USP12O75317 370 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 PTK2BQ14289 1009 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 OTUD1Q5VV17 481 aaPredicted RBP15.6■□□□□ 0.09
SDF4-207ENST00000494748 GPR180Q86V85 440 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 TRIML2Q8N7C3 387 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 ZBTB8BQ8NAP8 495 aaPredicted RBP15.6■□□□□ 0.09
SDF4-207ENST00000494748 HM13Q8TCT9 377 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 ISOC1Q96CN7 298 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 MFSD3Q96ES6 412 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 MRPL45Q9BRJ2 306 aaKnown RBP15.6■□□□□ 0.09
SDF4-207ENST00000494748 TMEM79Q9BSE2 394 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 UTP6Q9NYH9 597 aaKnown RBP15.6■□□□□ 0.09
SDF4-207ENST00000494748 CD300AQ9UGN4 299 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 CDH7Q9ULB5 785 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 INO80B-WBP1J3KQ70 363 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 SDHDO14521 159 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 STAU1O95793 577 aaKnown RBP15.6■□□□□ 0.09
SDF4-207ENST00000494748 PRKAA1Q13131 559 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 ART3Q13508 389 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 C8orf82Q6P1X6 216 aaPredicted RBP15.6■□□□□ 0.09
SDF4-207ENST00000494748 RDH11Q8TC12 318 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms