RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 FAM131CQ96AQ9 280 aa23.14■■□□□ 1.29
SNIP1-203ENST00000493916 CCDC114Q96M63 670 aa23.14■■□□□ 1.29
SNIP1-203ENST00000493916 OMDQ99983 421 aa23.14■■□□□ 1.29
SNIP1-203ENST00000493916 CEP44Q9C0F1 390 aa23.14■■□□□ 1.29
SNIP1-203ENST00000493916 MAGEH1Q9H213 219 aa23.14■■□□□ 1.29
SNIP1-203ENST00000493916 ARHGAP20Q9P2F6 1191 aa23.14■■□□□ 1.29
SNIP1-203ENST00000493916 DNAI1Q9UI46 699 aa23.14■■□□□ 1.29
SNIP1-203ENST00000493916 PPM1HQ9ULR3 514 aa23.14■■□□□ 1.29
SNIP1-203ENST00000493916 PCDH15Q96QU1 1955 aa23.14■■□□□ 1.29
SNIP1-203ENST00000493916 A0A087X0T9 212 aa23.13■■□□□ 1.29
SNIP1-203ENST00000493916 A0A1B0GTW7 788 aa23.13■■□□□ 1.29
SNIP1-203ENST00000493916 WASH4PA8MWX3 477 aa23.13■■□□□ 1.29
SNIP1-203ENST00000493916 EIF3CLB5ME19 914 aaKnown RBP23.13■■□□□ 1.29
SNIP1-203ENST00000493916 K7ERQ8 282 aa23.13■■□□□ 1.29
SNIP1-203ENST00000493916 TM4SF5O14894 197 aa23.13■■□□□ 1.29
SNIP1-203ENST00000493916 SMAD6O43541 496 aaKnown RBP23.13■■□□□ 1.29
SNIP1-203ENST00000493916 RAMP2O60895 175 aa23.13■■□□□ 1.29
SNIP1-203ENST00000493916 RNF8O76064 485 aa23.13■■□□□ 1.29
SNIP1-203ENST00000493916 FAM228BP0C875 321 aa23.13■■□□□ 1.29
SNIP1-203ENST00000493916 EPHB2P29323 1055 aa23.13■■□□□ 1.29
SNIP1-203ENST00000493916 ACVRL1P37023 503 aa23.13■■□□□ 1.29
SNIP1-203ENST00000493916 ARF5P84085 180 aa23.13■■□□□ 1.29
SNIP1-203ENST00000493916 FOXK2Q01167 660 aa23.13■■□□□ 1.29
SNIP1-203ENST00000493916 FAM46CQ5VWP2 391 aa23.13■■□□□ 1.29
SNIP1-203ENST00000493916 C22orf39Q6P5X5 142 aa23.13■■□□□ 1.29
SNIP1-203ENST00000493916 VSTM4Q8IW00 320 aa23.13■■□□□ 1.29
SNIP1-203ENST00000493916 OR2A12Q8NGT7 310 aa23.13■■□□□ 1.29
SNIP1-203ENST00000493916 C1orf216Q8TAB5 229 aa23.13■■□□□ 1.29
SNIP1-203ENST00000493916 ARHGEF2Q92974 986 aaKnown RBP23.13■■□□□ 1.29
SNIP1-203ENST00000493916 EIF3CQ99613 913 aaKnown RBP23.13■■□□□ 1.29
SNIP1-203ENST00000493916 DNAJC7Q99615 494 aa23.13■■□□□ 1.29
SNIP1-203ENST00000493916 NCAPGQ9BPX3 1015 aa23.13■■□□□ 1.29
SNIP1-203ENST00000493916 NEUROG2Q9H2A3 272 aa23.13■■□□□ 1.29
SNIP1-203ENST00000493916 MYO1AQ9UBC5 1043 aa23.13■■□□□ 1.29
SNIP1-203ENST00000493916 AP4E1Q9UPM8 1137 aa23.13■■□□□ 1.29
SNIP1-203ENST00000493916 DCDC2BA2VCK2 349 aa23.12■■□□□ 1.29
SNIP1-203ENST00000493916 C4orf47A7E2U8 309 aa23.12■■□□□ 1.29
SNIP1-203ENST00000493916 C10orf142B7Z368 130 aa23.12■■□□□ 1.29
SNIP1-203ENST00000493916 C1QTNF3-AMACRE9PGA6 284 aa23.12■■□□□ 1.29
SNIP1-203ENST00000493916 FGF10O15520 208 aaPredicted RBP23.12■■□□□ 1.29
SNIP1-203ENST00000493916 DRD3P35462 400 aa23.12■■□□□ 1.29
SNIP1-203ENST00000493916 ACAP1Q15027 740 aa23.12■■□□□ 1.29
SNIP1-203ENST00000493916 HDDC3Q8N4P3 179 aa23.12■■□□□ 1.29
SNIP1-203ENST00000493916 ZCCHC9Q8N567 271 aaKnown RBP23.12■■□□□ 1.29
SNIP1-203ENST00000493916 THAP2Q9H0W7 228 aa23.12■■□□□ 1.29
SNIP1-203ENST00000493916 CATSPERBQ9H7T0 1116 aa23.12■■□□□ 1.29
SNIP1-203ENST00000493916 SARDHQ9UL12 918 aa23.12■■□□□ 1.29
SNIP1-203ENST00000493916 NENFQ9UMX5 172 aa23.12■■□□□ 1.29
SNIP1-203ENST00000493916 FARP1Q9Y4F1 1045 aaPredicted RBP23.12■■□□□ 1.29
SNIP1-203ENST00000493916 CHD5Q8TDI0 1954 aa23.12■■□□□ 1.29
SNIP1-203ENST00000493916 LRRC72A6NJI9 287 aa23.11■■□□□ 1.29
SNIP1-203ENST00000493916 SLC7A4O43246 635 aa23.11■■□□□ 1.29
SNIP1-203ENST00000493916 CREB3O43889 395 aa23.11■■□□□ 1.29
SNIP1-203ENST00000493916 GALCP54803 685 aa23.11■■□□□ 1.29
SNIP1-203ENST00000493916 ADPRHP54922 357 aa23.11■■□□□ 1.29
SNIP1-203ENST00000493916 GEMIN4P57678 1058 aaKnown RBP23.11■■□□□ 1.29
SNIP1-203ENST00000493916 POLD3Q15054 466 aaPredicted RBP23.11■■□□□ 1.29
SNIP1-203ENST00000493916 ERMARDQ5T6L9 678 aa23.11■■□□□ 1.29
SNIP1-203ENST00000493916 KIAA0895LQ68EN5 471 aa23.11■■□□□ 1.29
SNIP1-203ENST00000493916 ALKBH5Q6P6C2 394 aaKnown RBP23.11■■□□□ 1.29
SNIP1-203ENST00000493916 PSTKQ8IV42 348 aaKnown RBP23.11■■□□□ 1.29
SNIP1-203ENST00000493916 PCDH20Q8N6Y1 951 aaKnown RBP23.11■■□□□ 1.29
SNIP1-203ENST00000493916 OR2T34Q8NGX1 318 aa23.11■■□□□ 1.29
SNIP1-203ENST00000493916 PIP4K2CQ8TBX8 421 aa23.11■■□□□ 1.29
SNIP1-203ENST00000493916 SNX19Q92543 992 aa23.11■■□□□ 1.29
SNIP1-203ENST00000493916 BIRC7Q96CA5 298 aa23.11■■□□□ 1.29
SNIP1-203ENST00000493916 PEBP4Q96S96 227 aa23.11■■□□□ 1.29
SNIP1-203ENST00000493916 MIR1-1HGQ9H1L0 117 aa23.11■■□□□ 1.29
SNIP1-203ENST00000493916 OSGEPQ9NPF4 335 aa23.11■■□□□ 1.29
SNIP1-203ENST00000493916 FSCN3Q9NQT6 498 aa23.11■■□□□ 1.29
SNIP1-203ENST00000493916 EIF2B4Q9UI10 523 aaKnown RBP23.11■■□□□ 1.29
SNIP1-203ENST00000493916 ARHGAP33O14559 1287 aa23.1■■□□□ 1.29
SNIP1-203ENST00000493916 BCAT2O15382 392 aaPredicted RBP23.1■■□□□ 1.29
SNIP1-203ENST00000493916 PRPSAP2O60256 369 aa23.1■■□□□ 1.29
SNIP1-203ENST00000493916 LRCH4O75427 683 aa23.1■■□□□ 1.29
SNIP1-203ENST00000493916 ZNF821O75541 412 aaPredicted RBP23.1■■□□□ 1.29
SNIP1-203ENST00000493916 CD160O95971 181 aa23.1■■□□□ 1.29
SNIP1-203ENST00000493916 CYP1A2P05177 515 aa23.1■■□□□ 1.29
SNIP1-203ENST00000493916 IGHV4-34P06331 123 aa23.1■■□□□ 1.29
SNIP1-203ENST00000493916 SYPP08247 313 aa23.1■■□□□ 1.29
SNIP1-203ENST00000493916 MIPP30301 263 aa23.1■■□□□ 1.29
SNIP1-203ENST00000493916 PCK1P35558 622 aa23.1■■□□□ 1.29
SNIP1-203ENST00000493916 METAP1P53582 386 aa23.1■■□□□ 1.29
SNIP1-203ENST00000493916 DAB2IPQ5VWQ8 1189 aa23.1■■□□□ 1.29
SNIP1-203ENST00000493916 NCEH1Q6PIU2 408 aa23.1■■□□□ 1.29
SNIP1-203ENST00000493916 CYP4V2Q6ZWL3 525 aaPredicted RBP23.1■■□□□ 1.29
SNIP1-203ENST00000493916 TMIEQ8NEW7 156 aa23.1■■□□□ 1.29
SNIP1-203ENST00000493916 OR8K1Q8NGG5 319 aa23.1■■□□□ 1.29
SNIP1-203ENST00000493916 SNRNP25Q9BV90 132 aaKnown RBP23.1■■□□□ 1.29
SNIP1-203ENST00000493916 NOL6Q9H6R4 1146 aaKnown RBP23.1■■□□□ 1.29
SNIP1-203ENST00000493916 GPATCH2LQ9NWQ4 482 aa23.1■■□□□ 1.29
SNIP1-203ENST00000493916 PCSK1NQ9UHG2 260 aa23.1■■□□□ 1.29
SNIP1-203ENST00000493916 HPCAL4Q9UM19 191 aa23.1■■□□□ 1.29
SNIP1-203ENST00000493916 BNIP3LO60238 219 aa23.09■■□□□ 1.29
SNIP1-203ENST00000493916 FSBPO95073 299 aa23.09■■□□□ 1.29
SNIP1-203ENST00000493916 CTSLP07711 333 aa23.09■■□□□ 1.29
SNIP1-203ENST00000493916 TPM1P09493 284 aa23.09■■□□□ 1.29
SNIP1-203ENST00000493916 CD27P26842 260 aa23.09■■□□□ 1.29
SNIP1-203ENST00000493916 CHRNA3P32297 505 aa23.09■■□□□ 1.29
SNIP1-203ENST00000493916 MAPK8P45983 427 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms