RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 SP110Q9HB58 689 aa14.38□□□□□ -0.11
PDZRN3-210ENST00000492909 BRWD1Q9NSI6 2320 aa14.38□□□□□ -0.11
PDZRN3-210ENST00000492909 DOCK8Q8NF50 2099 aa14.38□□□□□ -0.11
PDZRN3-210ENST00000492909 A0A0D9SEW6 157 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 SLC9A3R1O14745 358 aaPredicted RBP14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 JCHAINP01591 159 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 KCNA5P22460 613 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 ACVRL1P37023 503 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 FDFT1P37268 417 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 CDH18Q13634 790 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 ITPRIPL1Q6GPH6 555 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 CXorf57Q6NSI4 855 aaKnown RBP14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 ZNF783Q6ZMS7 281 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 CCDC117Q8IWD4 279 aaPredicted RBP14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 KIAA1958Q8N8K9 716 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 OR52K2Q8NGK3 314 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 PRCCQ92733 491 aaPredicted RBP14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 SMARCD2Q92925 531 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 BHMTQ93088 406 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 ASB16Q96NS5 453 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 FOXP3Q9BZS1 431 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 S1PR5Q9H228 398 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 UBE2ZQ9H832 354 aaPredicted RBP14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 ETNK1Q9HBU6 452 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 E7EVH7 732 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 J3KR12 359 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 MYO1CO00159 1063 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 CHADO15335 359 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 NEBLO76041 1014 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 METTL18O95568 372 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 HOXD9P28356 352 aaPredicted RBP14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 IL10RBQ08334 325 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 KCNJ11Q14654 390 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 PARP6Q2NL67 630 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 FAM78AQ5JUQ0 283 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 FAXCQ5TGI0 409 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 IL31Q6EBC2 164 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 LRIG3Q6UXM1 1119 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 MFN1Q8IWA4 741 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 NAT8LQ8N9F0 302 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 OR7D4Q8NG98 312 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 NSMCE1Q8WV22 266 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 MAML1Q92585 1016 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 HLA-CQ95604 372 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 TEKT5Q96M29 485 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 AGAP3Q96P47 875 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 IL12RB2Q99665 862 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 MUC3BQ9H195 1237 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 IGSF9Q9P2J2 1179 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 RSPH14Q9UHP6 348 aa14.37□□□□□ -0.11
PDZRN3-210ENST00000492909 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.36□□□□□ -0.11
PDZRN3-210ENST00000492909 EIF3HO15372 352 aaKnown RBP eCLIP14.36□□□□□ -0.11
PDZRN3-210ENST00000492909 ZBTB24O43167 697 aaPredicted RBP14.36□□□□□ -0.11
PDZRN3-210ENST00000492909 PRAMEF11O60813 436 aa14.36□□□□□ -0.11
PDZRN3-210ENST00000492909 APRTP07741 180 aa14.36□□□□□ -0.11
PDZRN3-210ENST00000492909 MAGEA6P43360 314 aa14.36□□□□□ -0.11
PDZRN3-210ENST00000492909 RENBPP51606 427 aa14.36□□□□□ -0.11
PDZRN3-210ENST00000492909 GNGT1P63211 74 aa14.36□□□□□ -0.11
PDZRN3-210ENST00000492909 DHX9Q08211 1270 aaKnown RBP14.36□□□□□ -0.11
PDZRN3-210ENST00000492909 SEMA5AQ13591 1074 aa14.36□□□□□ -0.11
PDZRN3-210ENST00000492909 HNRNPDQ14103 355 aaKnown RBP14.36□□□□□ -0.11
PDZRN3-210ENST00000492909 EMC10Q5UCC4 262 aa14.36□□□□□ -0.11
PDZRN3-210ENST00000492909 ANKRD22Q5VYY1 191 aa14.36□□□□□ -0.11
PDZRN3-210ENST00000492909 RNF219Q5W0B1 726 aaPredicted RBP14.36□□□□□ -0.11
PDZRN3-210ENST00000492909 RNF43Q68DV7 783 aa14.36□□□□□ -0.11
PDZRN3-210ENST00000492909 TMC3Q7Z5M5 1100 aa14.36□□□□□ -0.11
PDZRN3-210ENST00000492909 CCDC25Q86WR0 208 aa14.36□□□□□ -0.11
PDZRN3-210ENST00000492909 ZCCHC9Q8N567 271 aaKnown RBP14.36□□□□□ -0.11
PDZRN3-210ENST00000492909 USP33Q8TEY7 942 aa14.36□□□□□ -0.11
PDZRN3-210ENST00000492909 RIPOR3Q96MK2 946 aa14.36□□□□□ -0.11
PDZRN3-210ENST00000492909 SPON2Q9BUD6 331 aa14.36□□□□□ -0.11
PDZRN3-210ENST00000492909 GBA3Q9H227 469 aa14.36□□□□□ -0.11
PDZRN3-210ENST00000492909 LINC00597Q9H2U6 94 aa14.36□□□□□ -0.11
PDZRN3-210ENST00000492909 ATP13A1Q9HD20 1204 aa14.36□□□□□ -0.11
PDZRN3-210ENST00000492909 PLK2Q9NYY3 685 aa14.36□□□□□ -0.11
PDZRN3-210ENST00000492909 CDH7Q9ULB5 785 aa14.36□□□□□ -0.11
PDZRN3-210ENST00000492909 WNT6Q9Y6F9 365 aa14.36□□□□□ -0.11
PDZRN3-210ENST00000492909 C5orf42Q9H799 3197 aa14.36□□□□□ -0.11
PDZRN3-210ENST00000492909 PEX11BO96011 259 aa14.35□□□□□ -0.11
PDZRN3-210ENST00000492909 PSMB4P28070 264 aa14.35□□□□□ -0.11
PDZRN3-210ENST00000492909 VIPR2P41587 438 aa14.35□□□□□ -0.11
PDZRN3-210ENST00000492909 OXCT1P55809 520 aa14.35□□□□□ -0.11
PDZRN3-210ENST00000492909 SLMAPQ14BN4 828 aa14.35□□□□□ -0.11
PDZRN3-210ENST00000492909 FSCBQ5H9T9 825 aa14.35□□□□□ -0.11
PDZRN3-210ENST00000492909 MARC1Q5VT66 337 aa14.35□□□□□ -0.11
PDZRN3-210ENST00000492909 FYB2Q5VWT5 728 aa14.35□□□□□ -0.11
PDZRN3-210ENST00000492909 KDM7AQ6ZMT4 941 aa14.35□□□□□ -0.11
PDZRN3-210ENST00000492909 CEP128Q6ZU80 1094 aa14.35□□□□□ -0.11
PDZRN3-210ENST00000492909 CNTD1Q8N815 330 aa14.35□□□□□ -0.11
PDZRN3-210ENST00000492909 IRF7Q92985 503 aa14.35□□□□□ -0.11
PDZRN3-210ENST00000492909 TRPV4Q9HBA0 871 aa14.35□□□□□ -0.11
PDZRN3-210ENST00000492909 SPHK2Q9NRA0 654 aa14.35□□□□□ -0.11
PDZRN3-210ENST00000492909 RBM22Q9NW64 420 aaKnown RBP eCLIP14.35□□□□□ -0.11
PDZRN3-210ENST00000492909 DENND4AQ7Z401 1863 aa14.35□□□□□ -0.11
PDZRN3-210ENST00000492909 TCRBV7S3A2A0A539 114 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 GOLGA8MH3BSY2 632 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 KDELR3O43731 214 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 PPFIA2O75334 1257 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 TMEM63AO94886 807 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 CD68P34810 354 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms