RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 ST7Q9NRC1 585 aa13.58□□□□□ -0.24
USF1-206ENST00000491629 NLGN3Q9NZ94 848 aa13.58□□□□□ -0.24
USF1-206ENST00000491629 SATB2Q9UPW6 733 aa13.58□□□□□ -0.24
USF1-206ENST00000491629 POM121BA6NF01 834 aa13.57□□□□□ -0.24
USF1-206ENST00000491629 E5RJQ4 531 aa13.57□□□□□ -0.24
USF1-206ENST00000491629 K7ERQ8 282 aa13.57□□□□□ -0.24
USF1-206ENST00000491629 SCAMP1O15126 338 aa13.57□□□□□ -0.24
USF1-206ENST00000491629 ALOX15BO15296 676 aa13.57□□□□□ -0.24
USF1-206ENST00000491629 PMM2O15305 246 aa13.57□□□□□ -0.24
USF1-206ENST00000491629 SMAD6O43541 496 aaKnown RBP13.57□□□□□ -0.24
USF1-206ENST00000491629 ZNF202O95125 648 aa13.57□□□□□ -0.24
USF1-206ENST00000491629 FZD2Q14332 565 aa13.57□□□□□ -0.24
USF1-206ENST00000491629 TMEM259Q4ZIN3 620 aa13.57□□□□□ -0.24
USF1-206ENST00000491629 COBLL1Q53SF7 1204 aa13.57□□□□□ -0.24
USF1-206ENST00000491629 ARTNQ5T4W7 220 aa13.57□□□□□ -0.24
USF1-206ENST00000491629 SEL1L3Q68CR1 1132 aa13.57□□□□□ -0.24
USF1-206ENST00000491629 OR6B2Q6IFH4 312 aa13.57□□□□□ -0.24
USF1-206ENST00000491629 DSG4Q86SJ6 1040 aa13.57□□□□□ -0.24
USF1-206ENST00000491629 TMEM110Q86TL2 294 aa13.57□□□□□ -0.24
USF1-206ENST00000491629 HORMAD1Q86X24 394 aa13.57□□□□□ -0.24
USF1-206ENST00000491629 LSMEM2Q8N112 164 aa13.57□□□□□ -0.24
USF1-206ENST00000491629 CHST14Q8NCH0 376 aa13.57□□□□□ -0.24
USF1-206ENST00000491629 OR2A12Q8NGT7 310 aa13.57□□□□□ -0.24
USF1-206ENST00000491629 IFI44Q8TCB0 444 aa13.57□□□□□ -0.24
USF1-206ENST00000491629 UBE2Q2Q8WVN8 375 aa13.57□□□□□ -0.24
USF1-206ENST00000491629 ATXN7L3BQ96GX2 97 aa13.57□□□□□ -0.24
USF1-206ENST00000491629 SLC46A1Q96NT5 459 aa13.57□□□□□ -0.24
USF1-206ENST00000491629 NT5C1BQ96P26 610 aa13.57□□□□□ -0.24
USF1-206ENST00000491629 DPH1Q9BZG8 443 aa13.57□□□□□ -0.24
USF1-206ENST00000491629 CLMPQ9H6B4 373 aa13.57□□□□□ -0.24
USF1-206ENST00000491629 ACP6Q9NPH0 428 aa13.57□□□□□ -0.24
USF1-206ENST00000491629 ARMCX3Q9UH62 379 aaPredicted RBP13.57□□□□□ -0.24
USF1-206ENST00000491629 CNTN6Q9UQ52 1028 aa13.57□□□□□ -0.24
USF1-206ENST00000491629 ENTPD2Q9Y5L3 495 aa13.57□□□□□ -0.24
USF1-206ENST00000491629 NBPF19A0A087WUL8 3843 aa13.56□□□□□ -0.24
USF1-206ENST00000491629 CDRT15L2A8MXV6 281 aa13.56□□□□□ -0.24
USF1-206ENST00000491629 C1QTNF3-AMACRE9PGA6 284 aa13.56□□□□□ -0.24
USF1-206ENST00000491629 I6L893 689 aaPredicted RBP13.56□□□□□ -0.24
USF1-206ENST00000491629 K7ENP7 123 aa13.56□□□□□ -0.24
USF1-206ENST00000491629 RAD51BO15315 384 aa13.56□□□□□ -0.24
USF1-206ENST00000491629 EFSO43281 561 aa13.56□□□□□ -0.24
USF1-206ENST00000491629 BNIP3LO60238 219 aa13.56□□□□□ -0.24
USF1-206ENST00000491629 SNAP91O60641 907 aa13.56□□□□□ -0.24
USF1-206ENST00000491629 CNTN5O94779 1100 aa13.56□□□□□ -0.24
USF1-206ENST00000491629 HNRNPA2B1P22626 353 aaKnown RBP13.56□□□□□ -0.24
USF1-206ENST00000491629 PDX1P52945 283 aa13.56□□□□□ -0.24
USF1-206ENST00000491629 YWHAZP63104 245 aaKnown RBP13.56□□□□□ -0.24
USF1-206ENST00000491629 NUCB2P80303 420 aa13.56□□□□□ -0.24
USF1-206ENST00000491629 FKBP3Q00688 224 aaKnown RBP13.56□□□□□ -0.24
USF1-206ENST00000491629 AUHQ13825 339 aaKnown RBP13.56□□□□□ -0.24
USF1-206ENST00000491629 DRAP1Q14919 205 aaPredicted RBP13.56□□□□□ -0.24
USF1-206ENST00000491629 C3orf38Q5JPI3 329 aa13.56□□□□□ -0.24
USF1-206ENST00000491629 GUSBP11Q6P575 273 aa13.56□□□□□ -0.24
USF1-206ENST00000491629 INO80CQ6PI98 192 aaPredicted RBP13.56□□□□□ -0.24
USF1-206ENST00000491629 ATP6V0D2Q8N8Y2 350 aa13.56□□□□□ -0.24
USF1-206ENST00000491629 EXD3Q8N9H8 876 aa13.56□□□□□ -0.24
USF1-206ENST00000491629 MED8Q96G25 268 aa13.56□□□□□ -0.24
USF1-206ENST00000491629 POPDC2Q9HBU9 364 aa13.56□□□□□ -0.24
USF1-206ENST00000491629 METTL14Q9HCE5 456 aaKnown RBP13.56□□□□□ -0.24
USF1-206ENST00000491629 ANLNQ9NQW6 1124 aa13.56□□□□□ -0.24
USF1-206ENST00000491629 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.56□□□□□ -0.24
USF1-206ENST00000491629 SLC25A13Q9UJS0 675 aa13.56□□□□□ -0.24
USF1-206ENST00000491629 HS3ST2Q9Y278 367 aa13.56□□□□□ -0.24
USF1-206ENST00000491629 SYNJ2BP-COX16A0A087WUM0 186 aa13.55□□□□□ -0.24
USF1-206ENST00000491629 A0A1W2PQ27 194 aa13.55□□□□□ -0.24
USF1-206ENST00000491629 A0A1W2PQ64 194 aa13.55□□□□□ -0.24
USF1-206ENST00000491629 KPNA3O00505 521 aaPredicted RBP13.55□□□□□ -0.24
USF1-206ENST00000491629 ARHGAP6O43182 974 aa13.55□□□□□ -0.24
USF1-206ENST00000491629 SPINT1O43278 529 aa13.55□□□□□ -0.24
USF1-206ENST00000491629 SART1O43290 800 aaKnown RBP13.55□□□□□ -0.24
USF1-206ENST00000491629 ZNF821O75541 412 aaPredicted RBP13.55□□□□□ -0.24
USF1-206ENST00000491629 ZNF18P17022 549 aa13.55□□□□□ -0.24
USF1-206ENST00000491629 RRM1P23921 792 aa13.55□□□□□ -0.24
USF1-206ENST00000491629 CHRNA3P32297 505 aa13.55□□□□□ -0.24
USF1-206ENST00000491629 CDKN3Q16667 212 aa13.55□□□□□ -0.24
USF1-206ENST00000491629 C5orf22Q49AR2 442 aa13.55□□□□□ -0.24
USF1-206ENST00000491629 PERM1Q5SV97 790 aa13.55□□□□□ -0.24
USF1-206ENST00000491629 TTC39BQ5VTQ0 682 aaPredicted RBP13.55□□□□□ -0.24
USF1-206ENST00000491629 OTUD1Q5VV17 481 aaPredicted RBP13.55□□□□□ -0.24
USF1-206ENST00000491629 NEK5Q6P3R8 708 aa13.55□□□□□ -0.24
USF1-206ENST00000491629 CRTC1Q6UUV9 634 aa13.55□□□□□ -0.24
USF1-206ENST00000491629 Q6ZSR6 202 aa13.55□□□□□ -0.24
USF1-206ENST00000491629 ZNF548Q8NEK5 533 aaPredicted RBP13.55□□□□□ -0.24
USF1-206ENST00000491629 TMIEQ8NEW7 156 aa13.55□□□□□ -0.24
USF1-206ENST00000491629 MAPK15Q8TD08 544 aa13.55□□□□□ -0.24
USF1-206ENST00000491629 STK32AQ8WU08 396 aa13.55□□□□□ -0.24
USF1-206ENST00000491629 IFT43Q96FT9 208 aa13.55□□□□□ -0.24
USF1-206ENST00000491629 RPRD1AQ96P16 312 aaPredicted RBP13.55□□□□□ -0.24
USF1-206ENST00000491629 SLC2A13Q96QE2 648 aa13.55□□□□□ -0.24
USF1-206ENST00000491629 THSD1Q9NS62 852 aa13.55□□□□□ -0.24
USF1-206ENST00000491629 DNAJC28Q9NX36 388 aa13.55□□□□□ -0.24
USF1-206ENST00000491629 COX16Q9P0S2 106 aa13.55□□□□□ -0.24
USF1-206ENST00000491629 VANGL2Q9ULK5 521 aa13.55□□□□□ -0.24
USF1-206ENST00000491629 PNMA8BQ9ULN7 279 aaPredicted RBP13.55□□□□□ -0.24
USF1-206ENST00000491629 TBC1D30Q9Y2I9 924 aa13.55□□□□□ -0.24
USF1-206ENST00000491629 HS3ST4Q9Y661 456 aa13.55□□□□□ -0.24
USF1-206ENST00000491629 SLC28A2O43868 658 aa13.54□□□□□ -0.24
USF1-206ENST00000491629 WISP1O95388 367 aa13.54□□□□□ -0.24
USF1-206ENST00000491629 CD44P16070 742 aaKnown RBP13.54□□□□□ -0.24
USF1-206ENST00000491629 AKT2P31751 481 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms