RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 MARK4Q96L34 752 aa19.67■□□□□ 0.74
SNAPC3-206ENST00000490969 DCUN1D5Q9BTE7 237 aa19.67■□□□□ 0.74
SNAPC3-206ENST00000490969 C20orf96Q9NUD7 363 aaPredicted RBP19.67■□□□□ 0.74
SNAPC3-206ENST00000490969 TBC1D23Q9NUY8 699 aa19.67■□□□□ 0.74
SNAPC3-206ENST00000490969 A0A096LPK6 155 aa19.67■□□□□ 0.74
SNAPC3-206ENST00000490969 CCL15-CCL14A0A0B4J2E2 113 aa19.67■□□□□ 0.74
SNAPC3-206ENST00000490969 PLOD2O00469 737 aa19.67■□□□□ 0.74
SNAPC3-206ENST00000490969 MDM4O15151 490 aa19.67■□□□□ 0.74
SNAPC3-206ENST00000490969 GRID2O43424 1007 aa19.67■□□□□ 0.74
SNAPC3-206ENST00000490969 CILPO75339 1184 aa19.67■□□□□ 0.74
SNAPC3-206ENST00000490969 FUT4P22083 530 aa19.67■□□□□ 0.74
SNAPC3-206ENST00000490969 CCR3P51677 355 aa19.67■□□□□ 0.74
SNAPC3-206ENST00000490969 CCL15Q16663 113 aa19.67■□□□□ 0.74
SNAPC3-206ENST00000490969 NXNQ6DKJ4 435 aa19.67■□□□□ 0.74
SNAPC3-206ENST00000490969 CNTD1Q8N815 330 aa19.67■□□□□ 0.74
SNAPC3-206ENST00000490969 C12orf43Q96C57 262 aaKnown RBP19.67■□□□□ 0.74
SNAPC3-206ENST00000490969 COX4I2Q96KJ9 171 aa19.67■□□□□ 0.74
SNAPC3-206ENST00000490969 RBBP8Q99708 897 aa19.67■□□□□ 0.74
SNAPC3-206ENST00000490969 NAT9Q9BTE0 207 aa19.67■□□□□ 0.74
SNAPC3-206ENST00000490969 ANKRD60Q9BZ19 345 aa19.67■□□□□ 0.74
SNAPC3-206ENST00000490969 ADA2Q9NZK5 511 aa19.67■□□□□ 0.74
SNAPC3-206ENST00000490969 MAFBQ9Y5Q3 323 aaPredicted RBP19.67■□□□□ 0.74
SNAPC3-206ENST00000490969 DNAJC25-GNG10A0A024R161 153 aa19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 TCAF2A6NFQ2 919 aa19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 C9IYK1 514 aa19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 ZNF189O75820 626 aaPredicted RBP19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 TOMM70O94826 608 aa19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 CCR10P46092 362 aa19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 SLC5A3P53794 718 aa19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 ESRRGP62508 458 aa19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 CTBSQ01459 385 aa19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 MTX3Q5HYI7 312 aa19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 MAMDC4Q6UXC1 1216 aa19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 CLEC14AQ86T13 490 aa19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 SLC35B4Q969S0 331 aa19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 HEXIM2Q96MH2 286 aaKnown RBP19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 DHX35Q9H5Z1 703 aaKnown RBP19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 NMRAL1Q9HBL8 299 aa19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 ANLNQ9NQW6 1124 aa19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 OXSMQ9NWU1 459 aa19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 CDYLQ9Y232 598 aa19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 A0A0A0MRY4 1105 aa19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 LRRC37A2A6NM11 1700 aa19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 DPYSL4O14531 572 aa19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 SPRP35270 261 aaPredicted RBP19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 OSTNP61366 133 aa19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 RELAQ04206 551 aa19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 DLG2Q15700 870 aa19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 ZBED5Q49AG3 693 aa19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 PDCD4Q53EL6 469 aaKnown RBP19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 TMEM130Q8N3G9 435 aa19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 HTR3CQ8WXA8 447 aa19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 SPATA13Q96N96 652 aa19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 AGAP3Q96P47 875 aa19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 PCYT2Q99447 389 aa19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 SIX4Q9UIU6 781 aa19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 SNX13Q9Y5W8 968 aa19.66■□□□□ 0.74
SNAPC3-206ENST00000490969 ZNF701M0R085 212 aaPredicted RBP19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 HTRA2O43464 458 aaPredicted RBP19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 PIGNO95427 931 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 POLBP06746 335 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 TFEBP19484 476 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 HMOX2P30519 316 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 SDC4P31431 198 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 ICAM3P32942 547 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 NR2C2P49116 596 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 LIMK2P53671 638 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 RAB15P59190 212 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 GSTM4Q03013 218 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 MTA1Q13330 715 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 TRIM25Q14258 630 aaKnown RBP19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 GRAMD4Q6IC98 578 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 FSTL4Q6MZW2 842 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 RWDD4Q6NW29 188 aaKnown RBP19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 ANKRD23Q86SG2 305 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 FBXO16Q8IX29 292 aaPredicted RBP19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 COLGALT1Q8NBJ5 622 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 CDHR1Q96JP9 859 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 CIB1Q99828 191 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 DRC3Q9H069 523 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 CAB39LQ9H9S4 337 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 SUCOQ9UBS9 1254 aaKnown RBP19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 IPO11Q9UI26 975 aaKnown RBP19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 FAM155AB1AL88 458 aaPredicted RBP19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 ZNF487B1APH4 448 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 B4GALT4O60513 344 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 SERPINB7O75635 380 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 F7P08709 466 aaPredicted RBP19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 VDRP11473 427 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 PSMD7P51665 324 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 HK2P52789 917 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 RHDQ02161 417 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 NSUN2Q08J23 767 aaKnown RBP eCLIP19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 SPIDRQ14159 915 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 ARL13AQ5H913 290 aaPredicted RBP19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 STRA8Q7Z7C7 330 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 FAM47BQ8NA70 645 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 PCDHAC1Q9H158 963 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 HIPK3Q9H422 1215 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 PDGFCQ9NRA1 345 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms