RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 RAB6CQ9H0N0 254 aa7.81□□□□□ -1.16
CLDN1-202ENST00000490800 FBXO44Q9H4M3 255 aa7.81□□□□□ -1.16
CLDN1-202ENST00000490800 ZDHHC4Q9NPG8 344 aa7.81□□□□□ -1.16
CLDN1-202ENST00000490800 ARHGEF4Q9NR80 690 aa7.81□□□□□ -1.16
CLDN1-202ENST00000490800 CUEDC1Q9NWM3 386 aaPredicted RBP7.81□□□□□ -1.16
CLDN1-202ENST00000490800 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.81□□□□□ -1.16
CLDN1-202ENST00000490800 SH3BP1Q9Y3L3 701 aa7.81□□□□□ -1.16
CLDN1-202ENST00000490800 ATG2BQ96BY7 2078 aa7.81□□□□□ -1.16
CLDN1-202ENST00000490800 CACNA1AO00555 2505 aa7.81□□□□□ -1.16
CLDN1-202ENST00000490800 GREB1Q4ZG55 1949 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 ANAPC1Q9H1A4 1944 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 UQCRHLA0A096LP55 91 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 TBC1D3BA6NDS4 549 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 EFCAB8A8MWE9 144 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 SGK1O00141 431 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 PGRMC1O00264 195 aaKnown RBP7.8□□□□□ -1.16
CLDN1-202ENST00000490800 KHNYNO15037 678 aaKnown RBP7.8□□□□□ -1.16
CLDN1-202ENST00000490800 TRIM24O15164 1050 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 ATXN7O15265 892 aaPredicted RBP7.8□□□□□ -1.16
CLDN1-202ENST00000490800 SART1O43290 800 aaKnown RBP7.8□□□□□ -1.16
CLDN1-202ENST00000490800 FOXD2O60548 495 aaPredicted RBP7.8□□□□□ -1.16
CLDN1-202ENST00000490800 TLR5O60602 858 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 TULP3O75386 442 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 RNF8O76064 485 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 RHOBTB1O94844 696 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 KLF8O95600 359 aaPredicted RBP7.8□□□□□ -1.16
CLDN1-202ENST00000490800 TRUB2O95900 331 aaKnown RBP7.8□□□□□ -1.16
CLDN1-202ENST00000490800 FGGP02679 453 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 LTFP02788 710 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 APODP05090 189 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 FYNP06241 537 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 UQCRHP07919 91 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 THBS1P07996 1170 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 HNRNPLP14866 589 aaKnown RBP eCLIP7.8□□□□□ -1.16
CLDN1-202ENST00000490800 GBP1P32455 592 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 ATP5C1P36542 298 aaKnown RBP7.8□□□□□ -1.16
CLDN1-202ENST00000490800 EIF2DP41214 584 aaKnown RBP7.8□□□□□ -1.16
CLDN1-202ENST00000490800 GRIA2P42262 883 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 MATKP42679 507 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 TNFRSF4P43489 277 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 TUBP50607 506 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 HDAC4P56524 1084 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 YWHAZP63104 245 aaKnown RBP7.8□□□□□ -1.16
CLDN1-202ENST00000490800 MRPS21P82921 87 aaKnown RBP7.8□□□□□ -1.16
CLDN1-202ENST00000490800 ATP11AP98196 1134 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 CREB5Q02930 508 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 KDSRQ06136 332 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 C2orf54Q08AI8 447 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 TRIP4Q15650 581 aaPredicted RBP7.8□□□□□ -1.16
CLDN1-202ENST00000490800 CDO1Q16878 200 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 ANO4Q32M45 955 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 AASDHQ4L235 1098 aaPredicted RBP7.8□□□□□ -1.16
CLDN1-202ENST00000490800 USP39Q53GS9 565 aaKnown RBP7.8□□□□□ -1.16
CLDN1-202ENST00000490800 SEL1L2Q5TEA6 688 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 SAMD5Q5TGI4 173 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 OTUD1Q5VV17 481 aaPredicted RBP7.8□□□□□ -1.16
CLDN1-202ENST00000490800 ANO7Q6IWH7 933 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 FIGNL1Q6PIW4 674 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 CYP4V2Q6ZWL3 525 aaPredicted RBP7.8□□□□□ -1.16
CLDN1-202ENST00000490800 HTR3DQ70Z44 454 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 BNIPLQ7Z465 357 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 POLNQ7Z5Q5 900 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 ANKS1BQ7Z6G8 1248 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 RASSF3Q86WH2 238 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 DEFB106AQ8N104 65 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 C12orf50Q8NA57 414 aaPredicted RBP7.8□□□□□ -1.16
CLDN1-202ENST00000490800 IL17RCQ8NAC3 791 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 TXNDC5Q8NBS9 432 aaKnown RBP7.8□□□□□ -1.16
CLDN1-202ENST00000490800 SPATA4Q8NEY3 305 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 EXD1Q8NHP7 514 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 FAM172AQ8WUF8 416 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 IRGQQ8WZA9 623 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 GOLGA1Q92805 767 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 NT5C3BQ969T7 300 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 FAM149B1Q96BN6 582 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 OTUB2Q96DC9 234 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 PEBP4Q96S96 227 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 TBCBQ99426 244 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 NMUR1Q9HB89 426 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 TLR8Q9NR97 1041 aaKnown RBP7.8□□□□□ -1.16
CLDN1-202ENST00000490800 SPHK2Q9NRA0 654 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 KLHL11Q9NVR0 708 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 OSER1Q9NX31 292 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.8□□□□□ -1.16
CLDN1-202ENST00000490800 PCSK1NQ9UHG2 260 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 NUDT5Q9UKK9 219 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 MMP17Q9ULZ9 603 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.8□□□□□ -1.16
CLDN1-202ENST00000490800 PCDHGA5Q9Y5G8 931 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 V9GYY5 206 aaPredicted RBP7.8□□□□□ -1.16
CLDN1-202ENST00000490800 SDK1Q7Z5N4 2213 aa7.8□□□□□ -1.16
CLDN1-202ENST00000490800 A0A1W2PQH9 124 aa7.79□□□□□ -1.16
CLDN1-202ENST00000490800 TCRBV7S2A1N4TA0A589 114 aa7.79□□□□□ -1.16
CLDN1-202ENST00000490800 C3orf70A6NLC5 250 aaPredicted RBP7.79□□□□□ -1.16
CLDN1-202ENST00000490800 LCE2BO14633 110 aa7.79□□□□□ -1.16
CLDN1-202ENST00000490800 TM4SF5O14894 197 aa7.79□□□□□ -1.16
CLDN1-202ENST00000490800 MDM4O15151 490 aa7.79□□□□□ -1.16
CLDN1-202ENST00000490800 GREM1O60565 184 aa7.79□□□□□ -1.16
CLDN1-202ENST00000490800 ADAM23O75077 832 aa7.79□□□□□ -1.16
CLDN1-202ENST00000490800 ZRANB2O95218 330 aaKnown RBP eCLIP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms