RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 PROX2Q3B8N5 592 aa12.06□□□□□ -0.48
ACTN4-206ENST00000489451 INAVAQ3KP66 663 aa12.06□□□□□ -0.48
ACTN4-206ENST00000489451 MIIPQ5JXC2 388 aa12.06□□□□□ -0.48
ACTN4-206ENST00000489451 BNIPLQ7Z465 357 aa12.06□□□□□ -0.48
ACTN4-206ENST00000489451 FAM71AQ8IYT1 594 aa12.06□□□□□ -0.48
ACTN4-206ENST00000489451 PDCD7Q8N8D1 485 aaKnown RBP12.06□□□□□ -0.48
ACTN4-206ENST00000489451 CHST14Q8NCH0 376 aa12.06□□□□□ -0.48
ACTN4-206ENST00000489451 OR2A12Q8NGT7 310 aa12.06□□□□□ -0.48
ACTN4-206ENST00000489451 VOPP1Q96AW1 172 aa12.06□□□□□ -0.48
ACTN4-206ENST00000489451 GBP4Q96PP9 640 aa12.06□□□□□ -0.48
ACTN4-206ENST00000489451 KDM4CQ9H3R0 1056 aa12.06□□□□□ -0.48
ACTN4-206ENST00000489451 VPS51Q9UID3 782 aa12.06□□□□□ -0.48
ACTN4-206ENST00000489451 VPS28Q9UK41 221 aa12.06□□□□□ -0.48
ACTN4-206ENST00000489451 DNAJC12Q9UKB3 198 aa12.06□□□□□ -0.48
ACTN4-206ENST00000489451 HS3ST2Q9Y278 367 aa12.06□□□□□ -0.48
ACTN4-206ENST00000489451 TDRD6O60522 2096 aaKnown RBP12.06□□□□□ -0.48
ACTN4-206ENST00000489451 IGLV3-10A0A075B6K4 115 aa12.05□□□□□ -0.48
ACTN4-206ENST00000489451 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.05□□□□□ -0.48
ACTN4-206ENST00000489451 DRGXA6NNA5 263 aa12.05□□□□□ -0.48
ACTN4-206ENST00000489451 GOLGA6L22H0YM25 854 aa12.05□□□□□ -0.48
ACTN4-206ENST00000489451 TRIM38O00635 465 aa12.05□□□□□ -0.48
ACTN4-206ENST00000489451 ALOX15BO15296 676 aa12.05□□□□□ -0.48
ACTN4-206ENST00000489451 YKT6O15498 198 aa12.05□□□□□ -0.48
ACTN4-206ENST00000489451 CLDN11O75508 207 aa12.05□□□□□ -0.48
ACTN4-206ENST00000489451 RRM1P23921 792 aa12.05□□□□□ -0.48
ACTN4-206ENST00000489451 NNMTP40261 264 aa12.05□□□□□ -0.48
ACTN4-206ENST00000489451 CDH4P55283 916 aa12.05□□□□□ -0.48
ACTN4-206ENST00000489451 ZNF177Q13360 481 aaPredicted RBP12.05□□□□□ -0.48
ACTN4-206ENST00000489451 ACCSLQ4AC99 568 aa12.05□□□□□ -0.48
ACTN4-206ENST00000489451 RAB6CQ53S08 254 aa12.05□□□□□ -0.48
ACTN4-206ENST00000489451 C2CD6Q53TS8 623 aa12.05□□□□□ -0.48
ACTN4-206ENST00000489451 HES3Q5TGS1 186 aa12.05□□□□□ -0.48
ACTN4-206ENST00000489451 LINGO4Q6UY18 593 aa12.05□□□□□ -0.48
ACTN4-206ENST00000489451 PRPF39Q86UA1 669 aaKnown RBP12.05□□□□□ -0.48
ACTN4-206ENST00000489451 CREBRFQ8IUR6 639 aa12.05□□□□□ -0.48
ACTN4-206ENST00000489451 SLC25A45Q8N413 288 aa12.05□□□□□ -0.48
ACTN4-206ENST00000489451 KLK6Q92876 244 aa12.05□□□□□ -0.48
ACTN4-206ENST00000489451 RNF34Q969K3 372 aa12.05□□□□□ -0.48
ACTN4-206ENST00000489451 PGAP3Q96FM1 320 aaPredicted RBP12.05□□□□□ -0.48
ACTN4-206ENST00000489451 NOX5Q96PH1 765 aa12.05□□□□□ -0.48
ACTN4-206ENST00000489451 TBCBQ99426 244 aa12.05□□□□□ -0.48
ACTN4-206ENST00000489451 MYOCQ99972 504 aa12.05□□□□□ -0.48
ACTN4-206ENST00000489451 TKTL2Q9H0I9 626 aa12.05□□□□□ -0.48
ACTN4-206ENST00000489451 SIK2Q9H0K1 926 aa12.05□□□□□ -0.48
ACTN4-206ENST00000489451 RAB6CQ9H0N0 254 aa12.05□□□□□ -0.48
ACTN4-206ENST00000489451 FZD3Q9NPG1 666 aa12.05□□□□□ -0.48
ACTN4-206ENST00000489451 MPP6Q9NZW5 540 aa12.05□□□□□ -0.48
ACTN4-206ENST00000489451 SLC12A6Q9UHW9 1150 aa12.05□□□□□ -0.48
ACTN4-206ENST00000489451 SLC25A13Q9UJS0 675 aa12.05□□□□□ -0.48
ACTN4-206ENST00000489451 TPX2Q9ULW0 747 aaKnown RBP12.05□□□□□ -0.48
ACTN4-206ENST00000489451 ZFR2Q9UPR6 939 aaKnown RBP12.05□□□□□ -0.48
ACTN4-206ENST00000489451 DMTF1Q9Y222 760 aa12.05□□□□□ -0.48
ACTN4-206ENST00000489451 FHOD1Q9Y613 1164 aa12.05□□□□□ -0.48
ACTN4-206ENST00000489451 BNIP3LO60238 219 aa12.04□□□□□ -0.48
ACTN4-206ENST00000489451 CD160O95971 181 aa12.04□□□□□ -0.48
ACTN4-206ENST00000489451 NTRK1P04629 796 aa12.04□□□□□ -0.48
ACTN4-206ENST00000489451 PRLRP16471 622 aa12.04□□□□□ -0.48
ACTN4-206ENST00000489451 ITPKBP27987 946 aa12.04□□□□□ -0.48
ACTN4-206ENST00000489451 FLT3P36888 993 aa12.04□□□□□ -0.48
ACTN4-206ENST00000489451 GABRB2P47870 512 aa12.04□□□□□ -0.48
ACTN4-206ENST00000489451 OXCT1P55809 520 aa12.04□□□□□ -0.48
ACTN4-206ENST00000489451 KCNC4Q03721 635 aa12.04□□□□□ -0.48
ACTN4-206ENST00000489451 PTK2Q05397 1052 aa12.04□□□□□ -0.48
ACTN4-206ENST00000489451 TARDBPQ13148 414 aaKnown RBP eCLIP12.04□□□□□ -0.48
ACTN4-206ENST00000489451 FGL2Q14314 439 aa12.04□□□□□ -0.48
ACTN4-206ENST00000489451 ZNF284Q2VY69 593 aa12.04□□□□□ -0.48
ACTN4-206ENST00000489451 GCNT7Q6ZNI0 430 aa12.04□□□□□ -0.48
ACTN4-206ENST00000489451 CLEC17AQ6ZS10 378 aa12.04□□□□□ -0.48
ACTN4-206ENST00000489451 IQCHQ86VS3 1027 aa12.04□□□□□ -0.48
ACTN4-206ENST00000489451 XYLT1Q86Y38 959 aa12.04□□□□□ -0.48
ACTN4-206ENST00000489451 SLC22A18ASQ8N1D0 253 aa12.04□□□□□ -0.48
ACTN4-206ENST00000489451 OXR1Q8N573 874 aa12.04□□□□□ -0.48
ACTN4-206ENST00000489451 OR7D4Q8NG98 312 aa12.04□□□□□ -0.48
ACTN4-206ENST00000489451 SKA1Q96BD8 255 aa12.04□□□□□ -0.48
ACTN4-206ENST00000489451 FAM81BQ96LP2 452 aa12.04□□□□□ -0.48
ACTN4-206ENST00000489451 NAA15Q9BXJ9 866 aaKnown RBP12.04□□□□□ -0.48
ACTN4-206ENST00000489451 PREBQ9HCU5 417 aa12.04□□□□□ -0.48
ACTN4-206ENST00000489451 UCKL1Q9NWZ5 548 aa12.04□□□□□ -0.48
ACTN4-206ENST00000489451 ACTL7AQ9Y615 435 aa12.04□□□□□ -0.48
ACTN4-206ENST00000489451 TRPM6Q9BX84 2022 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 LY6G6EA0A0G2JKS1 128 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 A0A1W2PQU0 124 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 CAPN8A6NHC0 703 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 E9PAM4 449 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 C1QTNF3-AMACRE9PGA6 284 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 SLC31A1O15431 190 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 RNGTTO60942 597 aaKnown RBP12.03□□□□□ -0.48
ACTN4-206ENST00000489451 ZMPSTE24O75844 475 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 RHOCP08134 193 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 C1SP09871 688 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 CYP11B1P15538 503 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 ACP1P24666 158 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 CHRNA3P32297 505 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 ARRB1P49407 418 aaPredicted RBP12.03□□□□□ -0.48
ACTN4-206ENST00000489451 SULT1E1P49888 294 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 RNASE9P60153 205 aaKnown RBP12.03□□□□□ -0.48
ACTN4-206ENST00000489451 INSM1Q01101 510 aaPredicted RBP12.03□□□□□ -0.48
ACTN4-206ENST00000489451 SRSF1Q07955 248 aaKnown RBP eCLIP12.03□□□□□ -0.48
ACTN4-206ENST00000489451 DRAP1Q14919 205 aaPredicted RBP12.03□□□□□ -0.48
ACTN4-206ENST00000489451 MAN2A1Q16706 1144 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms