RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 KLF15Q9UIH9 416 aa9.47□□□□□ -0.89
SSBP1-212ENST00000489378 F8P00451 2351 aa9.46□□□□□ -0.89
SSBP1-212ENST00000489378 UNC13CQ8NB66 2214 aa9.46□□□□□ -0.9
SSBP1-212ENST00000489378 PRAMEF33A0A0G2JMD5 474 aa9.46□□□□□ -0.9
SSBP1-212ENST00000489378 A0A1W2PQU0 124 aa9.46□□□□□ -0.9
SSBP1-212ENST00000489378 LRRIQ3A6PVS8 624 aaPredicted RBP9.46□□□□□ -0.9
SSBP1-212ENST00000489378 AGRPO00253 132 aa9.46□□□□□ -0.9
SSBP1-212ENST00000489378 NTN3O00634 580 aaPredicted RBP9.46□□□□□ -0.9
SSBP1-212ENST00000489378 NVLO15381 856 aaKnown RBP9.46□□□□□ -0.9
SSBP1-212ENST00000489378 PRAMEF10O60809 474 aa9.46□□□□□ -0.9
SSBP1-212ENST00000489378 LATS1O95835 1130 aa9.46□□□□□ -0.9
SSBP1-212ENST00000489378 RNF224P0DH78 156 aa9.46□□□□□ -0.9
SSBP1-212ENST00000489378 P4HA1P13674 534 aa9.46□□□□□ -0.9
SSBP1-212ENST00000489378 NME1P15531 152 aaKnown RBP9.46□□□□□ -0.9
SSBP1-212ENST00000489378 HNRNPKP61978 463 aaKnown RBP eCLIP9.46□□□□□ -0.9
SSBP1-212ENST00000489378 ECT2LQ008S8 904 aa9.46□□□□□ -0.9
SSBP1-212ENST00000489378 INCA1Q0VD86 236 aa9.46□□□□□ -0.9
SSBP1-212ENST00000489378 FZD2Q14332 565 aa9.46□□□□□ -0.9
SSBP1-212ENST00000489378 ZNF284Q2VY69 593 aa9.46□□□□□ -0.9
SSBP1-212ENST00000489378 RAB41Q5JT25 222 aa9.46□□□□□ -0.9
SSBP1-212ENST00000489378 PPP1R26Q5T8A7 1209 aaPredicted RBP9.46□□□□□ -0.9
SSBP1-212ENST00000489378 NADSYN1Q6IA69 706 aa9.46□□□□□ -0.9
SSBP1-212ENST00000489378 Q6ZSR6 202 aa9.46□□□□□ -0.9
SSBP1-212ENST00000489378 ABI3BPQ7Z7G0 1075 aa9.46□□□□□ -0.9
SSBP1-212ENST00000489378 PIGZQ86VD9 579 aa9.46□□□□□ -0.9
SSBP1-212ENST00000489378 SLC35F3Q8IY50 421 aa9.46□□□□□ -0.9
SSBP1-212ENST00000489378 APCDD1Q8J025 514 aa9.46□□□□□ -0.9
SSBP1-212ENST00000489378 CARNMT1Q8N4J0 409 aa9.46□□□□□ -0.9
SSBP1-212ENST00000489378 CCDC3Q9BQI4 270 aa9.46□□□□□ -0.9
SSBP1-212ENST00000489378 NT5C1AQ9BXI3 368 aa9.46□□□□□ -0.9
SSBP1-212ENST00000489378 SLC12A9Q9BXP2 914 aa9.46□□□□□ -0.9
SSBP1-212ENST00000489378 ULBP1Q9BZM6 244 aa9.46□□□□□ -0.9
SSBP1-212ENST00000489378 PREBQ9HCU5 417 aa9.46□□□□□ -0.9
SSBP1-212ENST00000489378 TMPRSS4Q9NRS4 437 aa9.46□□□□□ -0.9
SSBP1-212ENST00000489378 FOXJ2Q9P0K8 574 aa9.46□□□□□ -0.9
SSBP1-212ENST00000489378 SALL4Q9UJQ4 1053 aa9.46□□□□□ -0.9
SSBP1-212ENST00000489378 CEP83Q9Y592 693 aa9.46□□□□□ -0.9
SSBP1-212ENST00000489378 MTSS1O43312 755 aa9.45□□□□□ -0.9
SSBP1-212ENST00000489378 AQP9O43315 295 aa9.45□□□□□ -0.9
SSBP1-212ENST00000489378 AGFG2O95081 481 aa9.45□□□□□ -0.9
SSBP1-212ENST00000489378 CSF2P04141 144 aa9.45□□□□□ -0.9
SSBP1-212ENST00000489378 ITIH1P19827 911 aa9.45□□□□□ -0.9
SSBP1-212ENST00000489378 HNRNPA2B1P22626 353 aaKnown RBP9.45□□□□□ -0.9
SSBP1-212ENST00000489378 AKT2P31751 481 aa9.45□□□□□ -0.9
SSBP1-212ENST00000489378 UQCRFS1P47985 274 aa9.45□□□□□ -0.9
SSBP1-212ENST00000489378 CD97P48960 835 aa9.45□□□□□ -0.9
SSBP1-212ENST00000489378 TKTL1P51854 596 aa9.45□□□□□ -0.9
SSBP1-212ENST00000489378 EIF3IQ13347 325 aaKnown RBP9.45□□□□□ -0.9
SSBP1-212ENST00000489378 AGERQ15109 404 aa9.45□□□□□ -0.9
SSBP1-212ENST00000489378 SGSM1Q2NKQ1 1148 aa9.45□□□□□ -0.9
SSBP1-212ENST00000489378 RNF219Q5W0B1 726 aaPredicted RBP9.45□□□□□ -0.9
SSBP1-212ENST00000489378 PM20D1Q6GTS8 502 aa9.45□□□□□ -0.9
SSBP1-212ENST00000489378 STXBP4Q6ZWJ1 553 aa9.45□□□□□ -0.9
SSBP1-212ENST00000489378 EPM2AIP1Q7L775 607 aaPredicted RBP9.45□□□□□ -0.9
SSBP1-212ENST00000489378 PTAR1Q7Z6K3 402 aaPredicted RBP9.45□□□□□ -0.9
SSBP1-212ENST00000489378 DTX1Q86Y01 620 aa9.45□□□□□ -0.9
SSBP1-212ENST00000489378 CCDC65Q8IXS2 484 aa9.45□□□□□ -0.9
SSBP1-212ENST00000489378 CFAP52Q8N1V2 620 aa9.45□□□□□ -0.9
SSBP1-212ENST00000489378 MEIOBQ8N635 442 aa9.45□□□□□ -0.9
SSBP1-212ENST00000489378 ZNF557Q8N988 423 aaPredicted RBP9.45□□□□□ -0.9
SSBP1-212ENST00000489378 HJURPQ8NCD3 748 aaPredicted RBP9.45□□□□□ -0.9
SSBP1-212ENST00000489378 SPATA20Q8TB22 786 aa9.45□□□□□ -0.9
SSBP1-212ENST00000489378 ZNF507Q8TCN5 953 aa9.45□□□□□ -0.9
SSBP1-212ENST00000489378 LMX1AQ8TE12 382 aa9.45□□□□□ -0.9
SSBP1-212ENST00000489378 RNF139Q8WU17 664 aa9.45□□□□□ -0.9
SSBP1-212ENST00000489378 FRS2Q8WU20 508 aa9.45□□□□□ -0.9
SSBP1-212ENST00000489378 PPP1R13BQ96KQ4 1090 aa9.45□□□□□ -0.9
SSBP1-212ENST00000489378 SPAG5Q96R06 1193 aa9.45□□□□□ -0.9
SSBP1-212ENST00000489378 BOCQ9BWV1 1114 aa9.45□□□□□ -0.9
SSBP1-212ENST00000489378 GPR27Q9NS67 375 aa9.45□□□□□ -0.9
SSBP1-212ENST00000489378 OLA1Q9NTK5 396 aaKnown RBP9.45□□□□□ -0.9
SSBP1-212ENST00000489378 CCDC39Q9UFE4 941 aa9.45□□□□□ -0.9
SSBP1-212ENST00000489378 MAP4K5Q9Y4K4 846 aa9.45□□□□□ -0.9
SSBP1-212ENST00000489378 CSNK1G3Q9Y6M4 447 aa9.45□□□□□ -0.9
SSBP1-212ENST00000489378 ZFHX3Q15911 3703 aa9.45□□□□□ -0.9
SSBP1-212ENST00000489378 TRPM6Q9BX84 2022 aa9.45□□□□□ -0.9
SSBP1-212ENST00000489378 SDK2Q58EX2 2172 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 A0A087X0B3 334 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 A1L4Q6 167 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 TULP2O00295 520 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 IRAK2O43187 625 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 ACSL4O60488 711 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 ZBED1O96006 694 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 ASS1P00966 412 aaKnown RBP9.44□□□□□ -0.9
SSBP1-212ENST00000489378 IGLV3-27P01718 113 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 JMJD7P0C870 316 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 CD58P19256 250 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 COL8A1P27658 744 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 GJB2P29033 226 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 ETV5P41161 510 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 DLG4P78352 724 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 CLDN10P78369 228 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 CDH18Q13634 790 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 TPRG1LQ5T0D9 272 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 PIP5KL1Q5T9C9 394 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 BSPRYQ5W0U4 402 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 SEL1L3Q68CR1 1132 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 ATCAYQ86WG3 371 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 HORMAD1Q86X24 394 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 NELFCDQ8IXH7 590 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms