RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 VPS51Q9UID3 782 aa13.83□□□□□ -0.2
LMO4-203ENST00000489303 CAPN11Q9UMQ6 739 aa13.83□□□□□ -0.2
LMO4-203ENST00000489303 HS3ST2Q9Y278 367 aa13.83□□□□□ -0.2
LMO4-203ENST00000489303 CKAP5Q14008 2032 aa13.82□□□□□ -0.2
LMO4-203ENST00000489303 A0A0D9SEW6 157 aa13.82□□□□□ -0.2
LMO4-203ENST00000489303 A0A1W2PP55 124 aa13.82□□□□□ -0.2
LMO4-203ENST00000489303 LRRC72A6NJI9 287 aa13.82□□□□□ -0.2
LMO4-203ENST00000489303 CBX4O00257 560 aa13.82□□□□□ -0.2
LMO4-203ENST00000489303 DDX3XO00571 662 aaKnown RBP eCLIP13.82□□□□□ -0.29e-7■■■■■ 37.2
LMO4-203ENST00000489303 ALOX15BO15296 676 aa13.82□□□□□ -0.2
LMO4-203ENST00000489303 BNIP3LO60238 219 aa13.82□□□□□ -0.2
LMO4-203ENST00000489303 SNAP91O60641 907 aa13.82□□□□□ -0.2
LMO4-203ENST00000489303 RNF8O76064 485 aa13.82□□□□□ -0.2
LMO4-203ENST00000489303 LRIG2O94898 1065 aa13.82□□□□□ -0.2
LMO4-203ENST00000489303 TPM1P09493 284 aa13.82□□□□□ -0.2
LMO4-203ENST00000489303 CEACAM1P13688 526 aa13.82□□□□□ -0.2
LMO4-203ENST00000489303 L1CAMP32004 1257 aa13.82□□□□□ -0.2
LMO4-203ENST00000489303 RECQLP46063 649 aaPredicted RBP13.82□□□□□ -0.2
LMO4-203ENST00000489303 SLC20A2Q08357 652 aa13.82□□□□□ -0.2
LMO4-203ENST00000489303 SCAPQ12770 1279 aa13.82□□□□□ -0.2
LMO4-203ENST00000489303 E4F1Q66K89 784 aaPredicted RBP13.82□□□□□ -0.2
LMO4-203ENST00000489303 PLEKHA7Q6IQ23 1121 aa13.82□□□□□ -0.2
LMO4-203ENST00000489303 HDDC3Q8N4P3 179 aa13.82□□□□□ -0.2
LMO4-203ENST00000489303 OR7D4Q8NG98 312 aa13.82□□□□□ -0.2
LMO4-203ENST00000489303 CAMK1GQ96NX5 476 aa13.82□□□□□ -0.2
LMO4-203ENST00000489303 FAM129BQ96TA1 746 aa13.82□□□□□ -0.2
LMO4-203ENST00000489303 PSMB7Q99436 277 aa13.82□□□□□ -0.2
LMO4-203ENST00000489303 EPAS1Q99814 870 aa13.82□□□□□ -0.2
LMO4-203ENST00000489303 NCAPGQ9BPX3 1015 aa13.82□□□□□ -0.2
LMO4-203ENST00000489303 SCNM1Q9BWG6 230 aa13.82□□□□□ -0.2
LMO4-203ENST00000489303 C6orf106Q9H6K1 298 aaPredicted RBP13.82□□□□□ -0.2
LMO4-203ENST00000489303 FZD4Q9ULV1 537 aa13.82□□□□□ -0.2
LMO4-203ENST00000489303 HPCAL4Q9UM19 191 aa13.82□□□□□ -0.2
LMO4-203ENST00000489303 FAM47DPA6NHR8 397 aa13.81□□□□□ -0.2
LMO4-203ENST00000489303 ARHGAP33O14559 1287 aa13.81□□□□□ -0.2
LMO4-203ENST00000489303 MCF2LO15068 1137 aa13.81□□□□□ -0.2
LMO4-203ENST00000489303 BCAT2O15382 392 aaPredicted RBP13.81□□□□□ -0.2
LMO4-203ENST00000489303 ATMINO43313 823 aaPredicted RBP13.81□□□□□ -0.2
LMO4-203ENST00000489303 HYAL3O43820 417 aaPredicted RBP13.81□□□□□ -0.2
LMO4-203ENST00000489303 CREB3O43889 395 aa13.81□□□□□ -0.2
LMO4-203ENST00000489303 FSBPO95073 299 aa13.81□□□□□ -0.2
LMO4-203ENST00000489303 PROS1P07225 676 aa13.81□□□□□ -0.2
LMO4-203ENST00000489303 SRCP12931 536 aa13.81□□□□□ -0.2
LMO4-203ENST00000489303 VAV1P15498 845 aa13.81□□□□□ -0.2
LMO4-203ENST00000489303 GOT1P17174 413 aa13.81□□□□□ -0.2
LMO4-203ENST00000489303 EPHB2P29323 1055 aa13.81□□□□□ -0.2
LMO4-203ENST00000489303 GEMIN4P57678 1058 aaKnown RBP13.81□□□□□ -0.2
LMO4-203ENST00000489303 CCDC15Q0P6D6 951 aa13.81□□□□□ -0.2
LMO4-203ENST00000489303 SEMA3BQ13214 749 aa13.81□□□□□ -0.2
LMO4-203ENST00000489303 NFKBIBQ15653 356 aa13.81□□□□□ -0.2
LMO4-203ENST00000489303 TSR1Q2NL82 804 aaKnown RBP13.81□□□□□ -0.2
LMO4-203ENST00000489303 MANEALQ5VSG8 457 aa13.81□□□□□ -0.2
LMO4-203ENST00000489303 UNQ6494/PRO21346Q6UXR6 183 aa13.81□□□□□ -0.2
LMO4-203ENST00000489303 Q6ZVU0 165 aa13.81□□□□□ -0.2
LMO4-203ENST00000489303 PIP4P1Q86T03 277 aa13.81□□□□□ -0.2
LMO4-203ENST00000489303 ZNF354CQ86Y25 554 aa13.81□□□□□ -0.2
LMO4-203ENST00000489303 ZCCHC9Q8N567 271 aaKnown RBP13.81□□□□□ -0.2
LMO4-203ENST00000489303 ZDHHC5Q9C0B5 715 aa13.81□□□□□ -0.2
LMO4-203ENST00000489303 XPO4Q9C0E2 1151 aaKnown RBP13.81□□□□□ -0.2
LMO4-203ENST00000489303 MAGEH1Q9H213 219 aa13.81□□□□□ -0.2
LMO4-203ENST00000489303 NEUROG2Q9H2A3 272 aa13.81□□□□□ -0.2
LMO4-203ENST00000489303 CATSPERBQ9H7T0 1116 aa13.81□□□□□ -0.2
LMO4-203ENST00000489303 TMEM248Q9NWD8 314 aa13.81□□□□□ -0.2
LMO4-203ENST00000489303 DONSONQ9NYP3 566 aa13.81□□□□□ -0.2
LMO4-203ENST00000489303 MYO1AQ9UBC5 1043 aa13.81□□□□□ -0.2
LMO4-203ENST00000489303 ADAMTS1Q9UHI8 967 aa13.81□□□□□ -0.2
LMO4-203ENST00000489303 EIF2B4Q9UI10 523 aaKnown RBP13.81□□□□□ -0.2
LMO4-203ENST00000489303 DNAI1Q9UI46 699 aa13.81□□□□□ -0.2
LMO4-203ENST00000489303 TPX2Q9ULW0 747 aaKnown RBP13.81□□□□□ -0.2
LMO4-203ENST00000489303 FZD10Q9ULW2 581 aa13.81□□□□□ -0.2
LMO4-203ENST00000489303 MUC22E2RYF6 1773 aaPredicted RBP13.81□□□□□ -0.2
LMO4-203ENST00000489303 CACNA1EQ15878 2313 aa13.8□□□□□ -0.2
LMO4-203ENST00000489303 CXorf51AA0A1B0GTR3 108 aa13.8□□□□□ -0.2
LMO4-203ENST00000489303 TMEM191CA6NGB0 347 aa13.8□□□□□ -0.2
LMO4-203ENST00000489303 FAM72CH0Y354 149 aa13.8□□□□□ -0.2
LMO4-203ENST00000489303 RAMP2O60895 175 aa13.8□□□□□ -0.2
LMO4-203ENST00000489303 CD59P13987 128 aa13.8□□□□□ -0.2
LMO4-203ENST00000489303 HTR7P34969 479 aa13.8□□□□□ -0.2
LMO4-203ENST00000489303 TRIM14Q14142 442 aa13.8□□□□□ -0.2
LMO4-203ENST00000489303 POLD3Q15054 466 aaPredicted RBP13.8□□□□□ -0.2
LMO4-203ENST00000489303 TEAD4Q15561 434 aa13.8□□□□□ -0.2
LMO4-203ENST00000489303 FAM72AQ5TYM5 149 aa13.8□□□□□ -0.2
LMO4-203ENST00000489303 KIAA0895LQ68EN5 471 aa13.8□□□□□ -0.2
LMO4-203ENST00000489303 FAM72DQ6L9T8 149 aa13.8□□□□□ -0.2
LMO4-203ENST00000489303 LINGO4Q6UY18 593 aa13.8□□□□□ -0.2
LMO4-203ENST00000489303 FAM72BQ86X60 149 aa13.8□□□□□ -0.2
LMO4-203ENST00000489303 MINDY1Q8N5J2 469 aa13.8□□□□□ -0.2
LMO4-203ENST00000489303 OR2T34Q8NGX1 318 aa13.8□□□□□ -0.2
LMO4-203ENST00000489303 OR14C36Q8NHC7 312 aa13.8□□□□□ -0.2
LMO4-203ENST00000489303 FNIP1Q8TF40 1166 aa13.8□□□□□ -0.2
LMO4-203ENST00000489303 GATA6Q92908 595 aa13.8□□□□□ -0.2
LMO4-203ENST00000489303 CEP44Q9C0F1 390 aa13.8□□□□□ -0.2
LMO4-203ENST00000489303 ISCUQ9H1K1 167 aa13.8□□□□□ -0.2
LMO4-203ENST00000489303 DYRK4Q9NR20 520 aa13.8□□□□□ -0.2
LMO4-203ENST00000489303 ZNF212Q9UDV6 495 aa13.8□□□□□ -0.2
LMO4-203ENST00000489303 KLK13Q9UKR3 277 aa13.8□□□□□ -0.2
LMO4-203ENST00000489303 ZMIZ1Q9ULJ6 1067 aa13.8□□□□□ -0.2
LMO4-203ENST00000489303 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.8□□□□□ -0.2
LMO4-203ENST00000489303 SLCO1B1Q9Y6L6 691 aa13.8□□□□□ -0.2
LMO4-203ENST00000489303 ZZEF1O43149 2961 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms