RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 ZNF821O75541 412 aaPredicted RBP15.48■□□□□ 0.07
FDPS-213ENST00000489003 PALMO75781 387 aa15.48■□□□□ 0.07
FDPS-213ENST00000489003 PTMAP06454 111 aaKnown RBP15.48■□□□□ 0.07
FDPS-213ENST00000489003 VAV1P15498 845 aa15.48■□□□□ 0.07
FDPS-213ENST00000489003 TMCO3Q6UWJ1 677 aa15.48■□□□□ 0.07
FDPS-213ENST00000489003 MFSD7Q6UXD7 560 aa15.48■□□□□ 0.07
FDPS-213ENST00000489003 LEKR1Q6ZMV7 388 aa15.48■□□□□ 0.07
FDPS-213ENST00000489003 NT5DC3Q86UY8 548 aa15.48■□□□□ 0.07
FDPS-213ENST00000489003 TMPRSS6Q8IU80 811 aa15.48■□□□□ 0.07
FDPS-213ENST00000489003 PGBD3Q8N328 593 aa15.48■□□□□ 0.07
FDPS-213ENST00000489003 KRT35Q92764 455 aa15.48■□□□□ 0.07
FDPS-213ENST00000489003 MRGPRX1Q96LB2 322 aa15.48■□□□□ 0.07
FDPS-213ENST00000489003 RNF157Q96PX1 679 aa15.48■□□□□ 0.07
FDPS-213ENST00000489003 FAM129BQ96TA1 746 aa15.48■□□□□ 0.07
FDPS-213ENST00000489003 ZNF670Q9BS34 389 aa15.48■□□□□ 0.07
FDPS-213ENST00000489003 TSGA10Q9BZW7 698 aa15.48■□□□□ 0.07
FDPS-213ENST00000489003 MKRN2Q9H000 416 aaKnown RBP15.48■□□□□ 0.07
FDPS-213ENST00000489003 AMFRQ9UKV5 643 aa15.48■□□□□ 0.07
FDPS-213ENST00000489003 HPCAL4Q9UM19 191 aa15.48■□□□□ 0.07
FDPS-213ENST00000489003 PPP2R2CQ9Y2T4 447 aa15.48■□□□□ 0.07
FDPS-213ENST00000489003 PCDHA3Q9Y5H8 950 aa15.48■□□□□ 0.07
FDPS-213ENST00000489003 NYNRINQ9P2P1 1898 aaKnown RBP15.48■□□□□ 0.07
FDPS-213ENST00000489003 CXorf51AA0A1B0GTR3 108 aa15.47■□□□□ 0.07
FDPS-213ENST00000489003 J3KR12 359 aa15.47■□□□□ 0.07
FDPS-213ENST00000489003 KRT86O43790 486 aa15.47■□□□□ 0.07
FDPS-213ENST00000489003 LILRB5O75023 590 aa15.47■□□□□ 0.07
FDPS-213ENST00000489003 KRT1P04264 644 aa15.47■□□□□ 0.07
FDPS-213ENST00000489003 C7P10643 843 aa15.47■□□□□ 0.07
FDPS-213ENST00000489003 NDUFV2P19404 249 aa15.47■□□□□ 0.07
FDPS-213ENST00000489003 MARCKSL1P49006 195 aa15.47■□□□□ 0.07
FDPS-213ENST00000489003 SERPINH1P50454 418 aaKnown RBP15.47■□□□□ 0.07
FDPS-213ENST00000489003 PEX5P50542 639 aa15.47■□□□□ 0.07
FDPS-213ENST00000489003 PAFAH1B3Q15102 231 aaKnown RBP15.47■□□□□ 0.07
FDPS-213ENST00000489003 TAZQ16635 292 aa15.47■□□□□ 0.07
FDPS-213ENST00000489003 ARHGAP36Q6ZRI8 547 aa15.47■□□□□ 0.07
FDPS-213ENST00000489003 VSIG1Q86XK7 387 aa15.47■□□□□ 0.07
FDPS-213ENST00000489003 ZNF354CQ86Y25 554 aa15.47■□□□□ 0.07
FDPS-213ENST00000489003 KATNAL2Q8IYT4 538 aa15.47■□□□□ 0.07
FDPS-213ENST00000489003 RCOR2Q8IZ40 523 aa15.47■□□□□ 0.07
FDPS-213ENST00000489003 TPSD1Q9BZJ3 242 aa15.47■□□□□ 0.07
FDPS-213ENST00000489003 BCCIPQ9P287 314 aaKnown RBP eCLIP15.47■□□□□ 0.07
FDPS-213ENST00000489003 ARIH1Q9Y4X5 557 aaPredicted RBP15.47■□□□□ 0.07
FDPS-213ENST00000489003 PCDHGA2Q9Y5H1 932 aa15.47■□□□□ 0.07
FDPS-213ENST00000489003 R4GN57 208 aa15.47■□□□□ 0.07
FDPS-213ENST00000489003 ZSCAN5CA6NGD5 496 aaPredicted RBP15.46■□□□□ 0.07
FDPS-213ENST00000489003 ZNF487B1APH4 448 aa15.46■□□□□ 0.07
FDPS-213ENST00000489003 DFFAO00273 331 aa15.46■□□□□ 0.07
FDPS-213ENST00000489003 ZRANB2O95218 330 aaKnown RBP eCLIP15.46■□□□□ 0.077e-7■■□□□ 11.4
FDPS-213ENST00000489003 CTNNA2P26232 953 aa15.46■□□□□ 0.07
FDPS-213ENST00000489003 CLCN6P51797 869 aa15.46■□□□□ 0.07
FDPS-213ENST00000489003 RPS14P62263 151 aaKnown RBP15.46■□□□□ 0.07
FDPS-213ENST00000489003 SRSF5Q13243 272 aaKnown RBP15.46■□□□□ 0.07
FDPS-213ENST00000489003 INO80DQ53TQ3 878 aaPredicted RBP15.46■□□□□ 0.07
FDPS-213ENST00000489003 ODF2Q5BJF6 829 aa15.46■□□□□ 0.07
FDPS-213ENST00000489003 NCBP2-AS2Q69YL0 99 aa15.46■□□□□ 0.07
FDPS-213ENST00000489003 METTL3Q86U44 580 aaKnown RBP15.46■□□□□ 0.07
FDPS-213ENST00000489003 SYCE1Q8N0S2 351 aa15.46■□□□□ 0.07
FDPS-213ENST00000489003 STK40Q8N2I9 435 aa15.46■□□□□ 0.07
FDPS-213ENST00000489003 SIPA1Q96FS4 1042 aa15.46■□□□□ 0.07
FDPS-213ENST00000489003 MAK16Q9BXY0 300 aaKnown RBP15.46■□□□□ 0.07
FDPS-213ENST00000489003 RSPH9Q9H1X1 276 aaPredicted RBP15.46■□□□□ 0.07
FDPS-213ENST00000489003 PRDM16Q9HAZ2 1276 aa15.46■□□□□ 0.07
FDPS-213ENST00000489003 PDFQ9HBH1 243 aa15.46■□□□□ 0.07
FDPS-213ENST00000489003 LZTFL1Q9NQ48 299 aa15.46■□□□□ 0.07
FDPS-213ENST00000489003 ITM2CQ9NQX7 267 aa15.46■□□□□ 0.07
FDPS-213ENST00000489003 INVSQ9Y283 1065 aa15.46■□□□□ 0.07
FDPS-213ENST00000489003 FCF1Q9Y324 198 aaKnown RBP15.46■□□□□ 0.07
FDPS-213ENST00000489003 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.46■□□□□ 0.07
FDPS-213ENST00000489003 CAPN6Q9Y6Q1 641 aa15.46■□□□□ 0.07
FDPS-213ENST00000489003 MCF2LO15068 1137 aa15.45■□□□□ 0.06
FDPS-213ENST00000489003 PRAMEF11O60813 436 aa15.45■□□□□ 0.06
FDPS-213ENST00000489003 CNR2P34972 360 aa15.45■□□□□ 0.06
FDPS-213ENST00000489003 CTNNA1P35221 906 aaKnown RBP15.45■□□□□ 0.06
FDPS-213ENST00000489003 CDKN2BP42772 138 aa15.45■□□□□ 0.06
FDPS-213ENST00000489003 SLC10A2Q12908 348 aaPredicted RBP15.45■□□□□ 0.06
FDPS-213ENST00000489003 LLGL1Q15334 1064 aa15.45■□□□□ 0.06
FDPS-213ENST00000489003 CYTH1Q15438 398 aa15.45■□□□□ 0.06
FDPS-213ENST00000489003 MAP7D1Q3KQU3 841 aa15.45■□□□□ 0.06
FDPS-213ENST00000489003 KIAA1324Q6UXG2 1013 aaKnown RBP15.45■□□□□ 0.06
FDPS-213ENST00000489003 SPOCD1Q6ZMY3 1216 aa15.45■□□□□ 0.06
FDPS-213ENST00000489003 Q6ZVU0 165 aa15.45■□□□□ 0.06
FDPS-213ENST00000489003 PEX26Q7Z412 305 aa15.45■□□□□ 0.06
FDPS-213ENST00000489003 ABCA7Q8IZY2 2146 aa15.45■□□□□ 0.06
FDPS-213ENST00000489003 FRMD1Q8N878 549 aa15.45■□□□□ 0.06
FDPS-213ENST00000489003 OR2A12Q8NGT7 310 aa15.45■□□□□ 0.06
FDPS-213ENST00000489003 EXD1Q8NHP7 514 aa15.45■□□□□ 0.06
FDPS-213ENST00000489003 RLN3Q8WXF3 142 aa15.45■□□□□ 0.06
FDPS-213ENST00000489003 PRCCQ92733 491 aaPredicted RBP15.45■□□□□ 0.06
FDPS-213ENST00000489003 CEP44Q9C0F1 390 aa15.45■□□□□ 0.06
FDPS-213ENST00000489003 TNKS2Q9H2K2 1166 aa15.45■□□□□ 0.06
FDPS-213ENST00000489003 FBRSQ9HAH7 460 aa15.45■□□□□ 0.06
FDPS-213ENST00000489003 FAM86C1Q9NVL1 165 aa15.45■□□□□ 0.06
FDPS-213ENST00000489003 IPO11Q9UI26 975 aaKnown RBP15.45■□□□□ 0.06
FDPS-213ENST00000489003 WDFY4Q6ZS81 3184 aa15.45■□□□□ 0.06
FDPS-213ENST00000489003 SHROOM3Q8TF72 1996 aa15.45■□□□□ 0.06
FDPS-213ENST00000489003 CCDC66A2RUB6 948 aa15.44■□□□□ 0.06
FDPS-213ENST00000489003 BNIP3LO60238 219 aa15.44■□□□□ 0.06
FDPS-213ENST00000489003 FTCDO95954 541 aa15.44■□□□□ 0.06
FDPS-213ENST00000489003 KRT10P13645 584 aa15.44■□□□□ 0.06
FDPS-213ENST00000489003 SERPINB6P35237 376 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms