RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 GJB3O75712 270 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 TSPAN8P19075 237 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 ITGAXP20702 1163 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 PEX2P28328 305 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 LRPAP1P30533 357 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 COPAP53621 1224 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 NAGLUP54802 743 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 PKNOX1P55347 436 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 GJA9P57773 515 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 PPIDQ08752 370 aaKnown RBP12.91□□□□□ -0.34
CLIC4-202ENST00000488683 PCBP1Q15365 356 aaKnown RBP eCLIP12.91□□□□□ -0.34
CLIC4-202ENST00000488683 SFT2D3Q587I9 215 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 ZNF789Q5FWF6 425 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 SPANXN3Q5MJ09 141 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 NXNQ6DKJ4 435 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 LDB1Q86U70 411 aaPredicted RBP12.91□□□□□ -0.34
CLIC4-202ENST00000488683 MYLK4Q86YV6 388 aaPredicted RBP12.91□□□□□ -0.34
CLIC4-202ENST00000488683 CEP97Q8IW35 865 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 ARHGAP24Q8N264 748 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 TDRD5Q8NAT2 981 aaKnown RBP12.91□□□□□ -0.34
CLIC4-202ENST00000488683 VPS39Q96JC1 886 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 LENG8Q96PV6 779 aaPredicted RBP12.91□□□□□ -0.34
CLIC4-202ENST00000488683 NDNQ99608 321 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 ZCWPW1Q9H0M4 648 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 MPP6Q9NZW5 540 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 PCDHGB4Q9UN71 923 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 PCDHGB5Q9Y5G0 923 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 VAPBO95292 243 aa12.9□□□□□ -0.34
CLIC4-202ENST00000488683 SBK3P0C264 359 aa12.9□□□□□ -0.34
CLIC4-202ENST00000488683 SERPINB6P35237 376 aa12.9□□□□□ -0.34
CLIC4-202ENST00000488683 NAB1Q13506 487 aa12.9□□□□□ -0.34
CLIC4-202ENST00000488683 DBN1Q16643 649 aa12.9□□□□□ -0.34
CLIC4-202ENST00000488683 TIGD5Q53EQ6 642 aa12.9□□□□□ -0.34
CLIC4-202ENST00000488683 ESRP1Q6NXG1 681 aaKnown RBP12.9□□□□□ -0.34
CLIC4-202ENST00000488683 PAXIP1Q6ZW49 1069 aaPredicted RBP12.9□□□□□ -0.34
CLIC4-202ENST00000488683 NET1Q7Z628 596 aaPredicted RBP12.9□□□□□ -0.34
CLIC4-202ENST00000488683 OR6Y1Q8NGX8 325 aa12.9□□□□□ -0.34
CLIC4-202ENST00000488683 GPR152Q8TDT2 470 aa12.9□□□□□ -0.34
CLIC4-202ENST00000488683 SH3RF2Q8TEC5 729 aa12.9□□□□□ -0.34
CLIC4-202ENST00000488683 CATSPER2Q96P56 530 aa12.9□□□□□ -0.34
CLIC4-202ENST00000488683 TUBGCP5Q96RT8 1024 aa12.9□□□□□ -0.34
CLIC4-202ENST00000488683 ZNF184Q99676 751 aaPredicted RBP12.9□□□□□ -0.34
CLIC4-202ENST00000488683 LRRC40Q9H9A6 602 aa12.9□□□□□ -0.34
CLIC4-202ENST00000488683 CASS4Q9NQ75 786 aa12.9□□□□□ -0.34
CLIC4-202ENST00000488683 BFARQ9NZS9 450 aa12.9□□□□□ -0.34
CLIC4-202ENST00000488683 ZDHHC2Q9UIJ5 367 aa12.9□□□□□ -0.34
CLIC4-202ENST00000488683 FBXW11Q9UKB1 542 aa12.9□□□□□ -0.34
CLIC4-202ENST00000488683 HAS3O00219 553 aa12.9□□□□□ -0.34
CLIC4-202ENST00000488683 ZNF865P0CJ78 1059 aaPredicted RBP12.9□□□□□ -0.34
CLIC4-202ENST00000488683 PLK1P53350 603 aa12.9□□□□□ -0.34
CLIC4-202ENST00000488683 LIMK2P53671 638 aa12.9□□□□□ -0.34
CLIC4-202ENST00000488683 MPP3Q13368 585 aa12.9□□□□□ -0.34
CLIC4-202ENST00000488683 GRTP1Q5TC63 336 aa12.9□□□□□ -0.34
CLIC4-202ENST00000488683 PTAR1Q7Z6K3 402 aaPredicted RBP12.9□□□□□ -0.34
CLIC4-202ENST00000488683 LRRTM3Q86VH5 581 aa12.9□□□□□ -0.34
CLIC4-202ENST00000488683 CCNYL1Q8N7R7 359 aa12.9□□□□□ -0.34
CLIC4-202ENST00000488683 ZSCAN18Q8TBC5 510 aaPredicted RBP12.9□□□□□ -0.34
CLIC4-202ENST00000488683 ISL2Q96A47 359 aa12.9□□□□□ -0.34
CLIC4-202ENST00000488683 CYP4F12Q9HCS2 524 aa12.9□□□□□ -0.34
CLIC4-202ENST00000488683 NDE1Q9NXR1 346 aa12.9□□□□□ -0.34
CLIC4-202ENST00000488683 CDH22Q9UJ99 828 aa12.9□□□□□ -0.34
CLIC4-202ENST00000488683 RUVBL2Q9Y230 463 aaKnown RBP12.9□□□□□ -0.34
CLIC4-202ENST00000488683 SLC45A1Q9Y2W3 748 aa12.9□□□□□ -0.34
CLIC4-202ENST00000488683 MYOCOSA0A1B0GUC4 107 aa12.9□□□□□ -0.35
CLIC4-202ENST00000488683 F8W8V4 182 aa12.9□□□□□ -0.35
CLIC4-202ENST00000488683 RNASEH1O60930 286 aaKnown RBP12.9□□□□□ -0.35
CLIC4-202ENST00000488683 PGK1P00558 417 aa12.9□□□□□ -0.35
CLIC4-202ENST00000488683 AHSGP02765 367 aa12.9□□□□□ -0.35
CLIC4-202ENST00000488683 HNRNPLP14866 589 aaKnown RBP eCLIP12.9□□□□□ -0.35
CLIC4-202ENST00000488683 HARS2P49590 506 aaKnown RBP12.9□□□□□ -0.35
CLIC4-202ENST00000488683 CRYBB1P53674 252 aaPredicted RBP12.9□□□□□ -0.35
CLIC4-202ENST00000488683 MAXP61244 160 aa12.9□□□□□ -0.35
CLIC4-202ENST00000488683 SCAPQ12770 1279 aa12.9□□□□□ -0.35
CLIC4-202ENST00000488683 ASPHQ12797 758 aa12.9□□□□□ -0.35
CLIC4-202ENST00000488683 DLG1Q12959 904 aa12.9□□□□□ -0.35
CLIC4-202ENST00000488683 CDC16Q13042 620 aa12.9□□□□□ -0.35
CLIC4-202ENST00000488683 SEPT6Q14141 434 aa12.9□□□□□ -0.35
CLIC4-202ENST00000488683 TBCCQ15814 346 aa12.9□□□□□ -0.35
CLIC4-202ENST00000488683 INSCQ1MX18 579 aa12.9□□□□□ -0.35
CLIC4-202ENST00000488683 FAM110CQ1W6H9 321 aa12.9□□□□□ -0.35
CLIC4-202ENST00000488683 DNAL1Q4LDG9 190 aa12.9□□□□□ -0.35
CLIC4-202ENST00000488683 CXCL17Q6UXB2 119 aa12.9□□□□□ -0.35
CLIC4-202ENST00000488683 ANKRD23Q86SG2 305 aa12.9□□□□□ -0.35
CLIC4-202ENST00000488683 PPFIBP2Q8ND30 876 aa12.9□□□□□ -0.35
CLIC4-202ENST00000488683 MYLPFQ96A32 169 aa12.9□□□□□ -0.35
CLIC4-202ENST00000488683 NTAN1Q96AB6 310 aa12.9□□□□□ -0.35
CLIC4-202ENST00000488683 FERMT1Q9BQL6 677 aa12.9□□□□□ -0.35
CLIC4-202ENST00000488683 C1orf21Q9H246 121 aa12.9□□□□□ -0.35
CLIC4-202ENST00000488683 NMRAL1Q9HBL8 299 aa12.9□□□□□ -0.35
CLIC4-202ENST00000488683 ST3GAL5Q9UNP4 418 aa12.9□□□□□ -0.35
CLIC4-202ENST00000488683 HHLA1C9JL84 531 aa12.89□□□□□ -0.35
CLIC4-202ENST00000488683 BUD23O43709 281 aaKnown RBP12.89□□□□□ -0.35
CLIC4-202ENST00000488683 ALOX15P16050 662 aaPredicted RBP12.89□□□□□ -0.35
CLIC4-202ENST00000488683 GARSP41250 739 aaKnown RBP12.89□□□□□ -0.35
CLIC4-202ENST00000488683 GRIA4P48058 902 aa12.89□□□□□ -0.35
CLIC4-202ENST00000488683 NUDT2P50583 147 aa12.89□□□□□ -0.35
CLIC4-202ENST00000488683 AQP4P55087 323 aa12.89□□□□□ -0.35
CLIC4-202ENST00000488683 TBL3Q12788 808 aaKnown RBP12.89□□□□□ -0.35
CLIC4-202ENST00000488683 USP10Q14694 798 aaKnown RBP12.89□□□□□ -0.35
CLIC4-202ENST00000488683 TRMT5Q32P41 509 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms