RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 CDC6Q99741 560 aa11.51□□□□□ -0.57
PCYT1A-215ENST00000488235 STK33Q9BYT3 514 aa11.51□□□□□ -0.57
PCYT1A-215ENST00000488235 MUC3BQ9H195 1237 aa11.51□□□□□ -0.57
PCYT1A-215ENST00000488235 PDCL3Q9H2J4 239 aa11.51□□□□□ -0.57
PCYT1A-215ENST00000488235 TNKS2Q9H2K2 1166 aa11.51□□□□□ -0.57
PCYT1A-215ENST00000488235 SLC25A13Q9UJS0 675 aa11.51□□□□□ -0.57
PCYT1A-215ENST00000488235 HS3ST2Q9Y278 367 aa11.51□□□□□ -0.57
PCYT1A-215ENST00000488235 TLR4O00206 839 aa11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 SRGAP2O75044 1071 aa11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 GFPT2O94808 682 aa11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 ENDOD1O94919 500 aa11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 ZNF18P17022 549 aa11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 RDXP35241 583 aaKnown RBP11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 SCNN1AP37088 669 aa11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 OXCT1P55809 520 aa11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 JAM2P57087 298 aa11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 ATP11AP98196 1134 aa11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 FMO1Q01740 532 aa11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 PTP4A2Q12974 167 aa11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 DNAJC3Q13217 504 aa11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 C15orf59Q2T9L4 293 aaPredicted RBP11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 SMYD5Q6GMV2 418 aa11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 KANSL1Q7Z3B3 1105 aa11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 ATP11CQ8NB49 1132 aa11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 JOSD2Q8TAC2 188 aa11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 SLC30A5Q8TAD4 765 aa11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 ENOX1Q8TC92 643 aaKnown RBP11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 KLK6Q92876 244 aa11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 VOPP1Q96AW1 172 aa11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 ARRDC3Q96B67 414 aa11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 PCDHB18PQ96TA0 734 aa11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 MYOCQ99972 504 aa11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 METTL5Q9NRN9 209 aaKnown RBP11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 FAM207AQ9NSI2 230 aaPredicted RBP11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 NDFIP2Q9NV92 336 aa11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 RRN3Q9NYV6 651 aa11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 STAP1Q9ULZ2 295 aa11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 NEU3Q9UQ49 428 aa11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 SIK3Q9Y2K2 1263 aa11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 MGAQ8IWI9 3026 aa11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 ARID1BQ8NFD5 2236 aaPredicted RBP11.5□□□□□ -0.57
PCYT1A-215ENST00000488235 ATMQ13315 3056 aa11.49□□□□□ -0.57
PCYT1A-215ENST00000488235 FAM72CH0Y354 149 aa11.49□□□□□ -0.57
PCYT1A-215ENST00000488235 TNFSF14O43557 240 aa11.49□□□□□ -0.57
PCYT1A-215ENST00000488235 ZMPSTE24O75844 475 aa11.49□□□□□ -0.57
PCYT1A-215ENST00000488235 LSM8O95777 96 aaKnown RBP11.49□□□□□ -0.57
PCYT1A-215ENST00000488235 CD160O95971 181 aa11.49□□□□□ -0.57
PCYT1A-215ENST00000488235 CYP1A1P04798 512 aaPredicted RBP11.49□□□□□ -0.57
PCYT1A-215ENST00000488235 PRLRP16471 622 aa11.49□□□□□ -0.57
PCYT1A-215ENST00000488235 MMP8P22894 467 aa11.49□□□□□ -0.57
PCYT1A-215ENST00000488235 EEF1GP26641 437 aaKnown RBP11.49□□□□□ -0.57
PCYT1A-215ENST00000488235 EPHA8P29322 1005 aaPredicted RBP11.49□□□□□ -0.57
PCYT1A-215ENST00000488235 POLR2FP61218 127 aaKnown RBP11.49□□□□□ -0.57
PCYT1A-215ENST00000488235 ARF5P84085 180 aa11.49□□□□□ -0.57
PCYT1A-215ENST00000488235 SFSWAPQ12872 951 aaKnown RBP11.49□□□□□ -0.57
PCYT1A-215ENST00000488235 CAMK2BQ13554 666 aa11.49□□□□□ -0.57
PCYT1A-215ENST00000488235 SUZ12Q15022 739 aaKnown RBP11.49□□□□□ -0.57
PCYT1A-215ENST00000488235 FAM72AQ5TYM5 149 aa11.49□□□□□ -0.57
PCYT1A-215ENST00000488235 NAPEPLDQ6IQ20 393 aa11.49□□□□□ -0.57
PCYT1A-215ENST00000488235 FAM72DQ6L9T8 149 aa11.49□□□□□ -0.57
PCYT1A-215ENST00000488235 DHRS13Q6UX07 377 aa11.49□□□□□ -0.57
PCYT1A-215ENST00000488235 CLEC17AQ6ZS10 378 aa11.49□□□□□ -0.57
PCYT1A-215ENST00000488235 RBM43Q6ZSC3 357 aaKnown RBP11.49□□□□□ -0.57
PCYT1A-215ENST00000488235 FAM72BQ86X60 149 aa11.49□□□□□ -0.57
PCYT1A-215ENST00000488235 DCAF4L2Q8NA75 395 aa11.49□□□□□ -0.57
PCYT1A-215ENST00000488235 C1orf74Q96LT6 269 aa11.49□□□□□ -0.57
PCYT1A-215ENST00000488235 FZD3Q9NPG1 666 aa11.49□□□□□ -0.57
PCYT1A-215ENST00000488235 NLRC4Q9NPP4 1024 aa11.49□□□□□ -0.57
PCYT1A-215ENST00000488235 FANCLQ9NW38 375 aa11.49□□□□□ -0.57
PCYT1A-215ENST00000488235 DACH1Q9UI36 760 aa11.49□□□□□ -0.57
PCYT1A-215ENST00000488235 KPNA3O00505 521 aaPredicted RBP11.48□□□□□ -0.57
PCYT1A-215ENST00000488235 ALOX15BO15296 676 aa11.48□□□□□ -0.57
PCYT1A-215ENST00000488235 SLC7A4O43246 635 aa11.48□□□□□ -0.57
PCYT1A-215ENST00000488235 F9P00740 461 aa11.48□□□□□ -0.57
PCYT1A-215ENST00000488235 OR1E1P30953 314 aa11.48□□□□□ -0.57
PCYT1A-215ENST00000488235 GKP32189 559 aa11.48□□□□□ -0.57
PCYT1A-215ENST00000488235 CHRNA3P32297 505 aa11.48□□□□□ -0.57
PCYT1A-215ENST00000488235 ACVRL1P37023 503 aa11.48□□□□□ -0.57
PCYT1A-215ENST00000488235 SNX16P57768 344 aa11.48□□□□□ -0.57
PCYT1A-215ENST00000488235 CDR2Q01850 454 aa11.48□□□□□ -0.57
PCYT1A-215ENST00000488235 MTA1Q13330 715 aa11.48□□□□□ -0.57
PCYT1A-215ENST00000488235 SMAD1Q15797 465 aaKnown RBP11.48□□□□□ -0.57
PCYT1A-215ENST00000488235 CDO1Q16878 200 aa11.48□□□□□ -0.57
PCYT1A-215ENST00000488235 ZNF284Q2VY69 593 aa11.48□□□□□ -0.57
PCYT1A-215ENST00000488235 CCDC14Q49A88 953 aa11.48□□□□□ -0.57
PCYT1A-215ENST00000488235 ARSIQ5FYB1 569 aa11.48□□□□□ -0.57
PCYT1A-215ENST00000488235 MANEALQ5VSG8 457 aa11.48□□□□□ -0.57
PCYT1A-215ENST00000488235 SFMBT2Q5VUG0 894 aa11.48□□□□□ -0.57
PCYT1A-215ENST00000488235 FAM46CQ5VWP2 391 aa11.48□□□□□ -0.57
PCYT1A-215ENST00000488235 SEL1L3Q68CR1 1132 aa11.48□□□□□ -0.57
PCYT1A-215ENST00000488235 C22orf39Q6P5X5 142 aa11.48□□□□□ -0.57
PCYT1A-215ENST00000488235 LRSAM1Q6UWE0 723 aa11.48□□□□□ -0.57
PCYT1A-215ENST00000488235 KDM7AQ6ZMT4 941 aa11.48□□□□□ -0.57
PCYT1A-215ENST00000488235 DPY19L3Q6ZPD9 716 aa11.48□□□□□ -0.57
PCYT1A-215ENST00000488235 APTXQ7Z2E3 356 aaKnown RBP11.48□□□□□ -0.57
PCYT1A-215ENST00000488235 DSG4Q86SJ6 1040 aa11.48□□□□□ -0.57
PCYT1A-215ENST00000488235 SETD3Q86TU7 594 aaPredicted RBP11.48□□□□□ -0.57
PCYT1A-215ENST00000488235 PRPF39Q86UA1 669 aaKnown RBP11.48□□□□□ -0.57
PCYT1A-215ENST00000488235 TRIM69Q86WT6 500 aa11.48□□□□□ -0.57
PCYT1A-215ENST00000488235 DRC7Q8IY82 874 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms