RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 CBX4O00257 560 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 RIPK2O43353 540 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 ATP8B1O43520 1251 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 PRAMEF11O60813 436 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 USP12O75317 370 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 TBX10O75333 385 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 CPP00450 1065 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 GOLGA6DP0CG33 693 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 GLDCP23378 1020 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 CSKP41240 450 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 MAGEA4P43358 317 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 MAGEA6P43360 314 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 IFNAR2P48551 515 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 MAXP61244 160 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 IL10RBQ08334 325 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 ITKQ08881 620 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 IFFO1Q0D2I5 559 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 SLC10A7Q0GE19 358 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 GPS2Q13227 327 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 OLIG2Q13516 323 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 KCNC3Q14003 757 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 SPARCL1Q14515 664 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 LBRQ14739 615 aaKnown RBP7.05□□□□□ -1.28
PDAP1-203ENST00000488214 PARP6Q2NL67 630 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 MSS51Q4VC12 460 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 MPPE1Q53F39 396 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 HSP90B2PQ58FF3 399 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 DNAJC21Q5F1R6 531 aaKnown RBP7.05□□□□□ -1.28
PDAP1-203ENST00000488214 FNBP1LQ5T0N5 605 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 RNF219Q5W0B1 726 aaPredicted RBP7.05□□□□□ -1.28
PDAP1-203ENST00000488214 ZNF783Q6ZMS7 281 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 ZNF534Q76KX8 674 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 TRMT10CQ7L0Y3 403 aaKnown RBP7.05□□□□□ -1.28
PDAP1-203ENST00000488214 GPR149Q86SP6 731 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 ARID3BQ8IVW6 561 aaPredicted RBP7.05□□□□□ -1.28
PDAP1-203ENST00000488214 CELF5Q8N6W0 485 aaKnown RBP7.05□□□□□ -1.28
PDAP1-203ENST00000488214 GOLGA6L1Q8N7Z2 621 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 PDCD7Q8N8D1 485 aaKnown RBP7.05□□□□□ -1.28
PDAP1-203ENST00000488214 ATP11CQ8NB49 1132 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 FBXO36Q8NEA4 188 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 OR2W6PQ8NHA6 318 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 MAML1Q92585 1016 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 TMA16Q96EY4 203 aaKnown RBP7.05□□□□□ -1.28
PDAP1-203ENST00000488214 CFAP36Q96G28 342 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 TEKT5Q96M29 485 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 TTC25Q96NG3 672 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 IL12RB2Q99665 862 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 MLPHQ9BV36 600 aaPredicted RBP7.05□□□□□ -1.28
PDAP1-203ENST00000488214 CINPQ9BW66 212 aaPredicted RBP7.05□□□□□ -1.28
PDAP1-203ENST00000488214 FRMD8Q9BZ67 464 aaPredicted RBP7.05□□□□□ -1.28
PDAP1-203ENST00000488214 PHACTR1Q9C0D0 580 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 PABPC3Q9H361 631 aaKnown RBP7.05□□□□□ -1.28
PDAP1-203ENST00000488214 PRO3102Q9H379 93 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 SEMA4AQ9H3S1 761 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 RETREG1Q9H6L5 497 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 LRRC40Q9H9A6 602 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 VPS37BQ9H9H4 285 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 PDFQ9HBH1 243 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 GLOD4Q9HC38 313 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 XAB2Q9HCS7 855 aaKnown RBP7.05□□□□□ -1.28
PDAP1-203ENST00000488214 PIH1D1Q9NWS0 290 aaKnown RBP7.05□□□□□ -1.28
PDAP1-203ENST00000488214 CLDND1Q9NY35 253 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 GOLGA6AQ9NYA3 693 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 UBP1Q9NZI7 540 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 UBA2Q9UBT2 640 aaPredicted RBP7.05□□□□□ -1.28
PDAP1-203ENST00000488214 VPS28Q9UK41 221 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 TBC1D30Q9Y2I9 924 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 TRIOBPQ9H2D6 2365 aa7.04□□□□□ -1.28
PDAP1-203ENST00000488214 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.04□□□□□ -1.28
PDAP1-203ENST00000488214 GOLGA6L10A6NI86 522 aa7.04□□□□□ -1.28
PDAP1-203ENST00000488214 SMIM23A6NLE4 172 aa7.04□□□□□ -1.28
PDAP1-203ENST00000488214 E7ESA3 106 aa7.04□□□□□ -1.28
PDAP1-203ENST00000488214 GFRA2O00451 464 aa7.04□□□□□ -1.28
PDAP1-203ENST00000488214 EIF3HO15372 352 aaKnown RBP eCLIP7.04□□□□□ -1.28
PDAP1-203ENST00000488214 SNAP91O60641 907 aa7.04□□□□□ -1.28
PDAP1-203ENST00000488214 AVILO75366 819 aa7.04□□□□□ -1.28
PDAP1-203ENST00000488214 PAPLNO95428 1278 aa7.04□□□□□ -1.28
PDAP1-203ENST00000488214 AP2A1O95782 977 aa7.04□□□□□ -1.28
PDAP1-203ENST00000488214 PEX11BO96011 259 aa7.04□□□□□ -1.28
PDAP1-203ENST00000488214 TCF3P15923 654 aa7.04□□□□□ -1.28
PDAP1-203ENST00000488214 MZF1P28698 734 aaPredicted RBP7.04□□□□□ -1.28
PDAP1-203ENST00000488214 VIPR2P41587 438 aa7.04□□□□□ -1.28
PDAP1-203ENST00000488214 ELK3P41970 407 aa7.04□□□□□ -1.28
PDAP1-203ENST00000488214 GRIA1P42261 906 aa7.04□□□□□ -1.28
PDAP1-203ENST00000488214 RENBPP51606 427 aa7.04□□□□□ -1.28
PDAP1-203ENST00000488214 GEMP55040 296 aa7.04□□□□□ -1.28
PDAP1-203ENST00000488214 SESN2P58004 480 aaPredicted RBP7.04□□□□□ -1.28
PDAP1-203ENST00000488214 SARNPP82979 210 aaKnown RBP7.04□□□□□ -1.28
PDAP1-203ENST00000488214 DSC2Q02487 901 aa7.04□□□□□ -1.28
PDAP1-203ENST00000488214 ZNF844Q08AG5 666 aa7.04□□□□□ -1.28
PDAP1-203ENST00000488214 LMAN2Q12907 356 aa7.04□□□□□ -1.28
PDAP1-203ENST00000488214 HNRNPDQ14103 355 aaKnown RBP7.04□□□□□ -1.28
PDAP1-203ENST00000488214 PCSK7Q16549 785 aa7.04□□□□□ -1.28
PDAP1-203ENST00000488214 KYNUQ16719 465 aa7.04□□□□□ -1.28
PDAP1-203ENST00000488214 KRT71Q3SY84 523 aa7.04□□□□□ -1.28
PDAP1-203ENST00000488214 FSCBQ5H9T9 825 aa7.04□□□□□ -1.28
PDAP1-203ENST00000488214 FAM78AQ5JUQ0 283 aa7.04□□□□□ -1.28
PDAP1-203ENST00000488214 SPDYCQ5MJ68 293 aa7.04□□□□□ -1.28
PDAP1-203ENST00000488214 CEP85LQ5SZL2 805 aa7.04□□□□□ -1.28
PDAP1-203ENST00000488214 MARC1Q5VT66 337 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms