RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 SRSF5Q13243 272 aaKnown RBP19.98■□□□□ 0.79
SEC22A-208ENST00000487572 C9orf64Q5T6V5 341 aa19.98■□□□□ 0.79
SEC22A-208ENST00000487572 AFMIDQ63HM1 303 aa19.98■□□□□ 0.79
SEC22A-208ENST00000487572 Q6ZVU0 165 aa19.98■□□□□ 0.79
SEC22A-208ENST00000487572 TMPRSS6Q8IU80 811 aa19.98■□□□□ 0.79
SEC22A-208ENST00000487572 ARHGAP12Q8IWW6 846 aa19.98■□□□□ 0.79
SEC22A-208ENST00000487572 TP53INP2Q8IXH6 220 aa19.98■□□□□ 0.79
SEC22A-208ENST00000487572 LZTR1Q8N653 840 aa19.98■□□□□ 0.79
SEC22A-208ENST00000487572 LRRC57Q8N9N7 239 aa19.98■□□□□ 0.79
SEC22A-208ENST00000487572 OR2T3Q8NH03 318 aa19.98■□□□□ 0.79
SEC22A-208ENST00000487572 FRS2Q8WU20 508 aa19.98■□□□□ 0.79
SEC22A-208ENST00000487572 KRT35Q92764 455 aa19.98■□□□□ 0.79
SEC22A-208ENST00000487572 MRGPRX1Q96LB2 322 aa19.98■□□□□ 0.79
SEC22A-208ENST00000487572 KCNF1Q9H3M0 494 aa19.98■□□□□ 0.79
SEC22A-208ENST00000487572 PRDM16Q9HAZ2 1276 aa19.98■□□□□ 0.79
SEC22A-208ENST00000487572 LZTFL1Q9NQ48 299 aa19.98■□□□□ 0.79
SEC22A-208ENST00000487572 FCF1Q9Y324 198 aaKnown RBP19.98■□□□□ 0.79
SEC22A-208ENST00000487572 TARSL2A2RTX5 802 aaKnown RBP19.97■□□□□ 0.79
SEC22A-208ENST00000487572 C3orf70A6NLC5 250 aaPredicted RBP19.97■□□□□ 0.79
SEC22A-208ENST00000487572 SERPINB6P35237 376 aa19.97■□□□□ 0.79
SEC22A-208ENST00000487572 VASPP50552 380 aaPredicted RBP19.97■□□□□ 0.79
SEC22A-208ENST00000487572 GEMIN4P57678 1058 aaKnown RBP19.97■□□□□ 0.79
SEC22A-208ENST00000487572 SLC20A2Q08357 652 aa19.97■□□□□ 0.79
SEC22A-208ENST00000487572 C22orf39Q6P5X5 142 aa19.97■□□□□ 0.79
SEC22A-208ENST00000487572 ZC3H14Q6PJT7 736 aaKnown RBP19.97■□□□□ 0.79
SEC22A-208ENST00000487572 ARHGAP36Q6ZRI8 547 aa19.97■□□□□ 0.79
SEC22A-208ENST00000487572 STK40Q8N2I9 435 aa19.97■□□□□ 0.79
SEC22A-208ENST00000487572 ZBTB44Q8NCP5 570 aa19.97■□□□□ 0.79
SEC22A-208ENST00000487572 PTPRN2Q92932 1015 aa19.97■□□□□ 0.79
SEC22A-208ENST00000487572 FAF2Q96CS3 445 aa19.97■□□□□ 0.79
SEC22A-208ENST00000487572 TNKS2Q9H2K2 1166 aa19.97■□□□□ 0.79
SEC22A-208ENST00000487572 PPP2R2CQ9Y2T4 447 aa19.97■□□□□ 0.79
SEC22A-208ENST00000487572 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.97■□□□□ 0.79
SEC22A-208ENST00000487572 CAPN6Q9Y6Q1 641 aa19.97■□□□□ 0.79
SEC22A-208ENST00000487572 CCDC163A0A0D9SF12 145 aa19.96■□□□□ 0.79
SEC22A-208ENST00000487572 J3KR12 359 aa19.96■□□□□ 0.79
SEC22A-208ENST00000487572 MFSD11O43934 449 aa19.96■□□□□ 0.79
SEC22A-208ENST00000487572 FTCDO95954 541 aa19.96■□□□□ 0.79
SEC22A-208ENST00000487572 DNA2P51530 1060 aa19.96■□□□□ 0.79
SEC22A-208ENST00000487572 CLCN6P51797 869 aa19.96■□□□□ 0.79
SEC22A-208ENST00000487572 LLGL1Q15334 1064 aa19.96■□□□□ 0.79
SEC22A-208ENST00000487572 NCBP2-AS2Q69YL0 99 aa19.96■□□□□ 0.79
SEC22A-208ENST00000487572 MFSD7Q6UXD7 560 aa19.96■□□□□ 0.79
SEC22A-208ENST00000487572 PEX26Q7Z412 305 aa19.96■□□□□ 0.79
SEC22A-208ENST00000487572 RFX6Q8HWS3 928 aa19.96■□□□□ 0.79
SEC22A-208ENST00000487572 CCDC50Q8IVM0 306 aa19.96■□□□□ 0.79
SEC22A-208ENST00000487572 KATNAL2Q8IYT4 538 aa19.96■□□□□ 0.79
SEC22A-208ENST00000487572 SYCE1Q8N0S2 351 aa19.96■□□□□ 0.79
SEC22A-208ENST00000487572 PQLC3Q8N755 202 aa19.96■□□□□ 0.79
SEC22A-208ENST00000487572 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.96■□□□□ 0.79
SEC22A-208ENST00000487572 RLN3Q8WXF3 142 aa19.96■□□□□ 0.79
SEC22A-208ENST00000487572 PRCCQ92733 491 aaPredicted RBP19.96■□□□□ 0.79
SEC22A-208ENST00000487572 SIPA1Q96FS4 1042 aa19.96■□□□□ 0.79
SEC22A-208ENST00000487572 RNF157Q96PX1 679 aa19.96■□□□□ 0.79
SEC22A-208ENST00000487572 MAK16Q9BXY0 300 aaKnown RBP19.96■□□□□ 0.79
SEC22A-208ENST00000487572 SP110Q9HB58 689 aa19.96■□□□□ 0.79
SEC22A-208ENST00000487572 WDFY4Q6ZS81 3184 aa19.95■□□□□ 0.78
SEC22A-208ENST00000487572 ZSCAN5CA6NGD5 496 aaPredicted RBP19.95■□□□□ 0.78
SEC22A-208ENST00000487572 RNASEH1O60930 286 aaKnown RBP19.95■□□□□ 0.78
SEC22A-208ENST00000487572 RPP40O75818 363 aaKnown RBP19.95■□□□□ 0.78
SEC22A-208ENST00000487572 MAP3K6O95382 1288 aa19.95■□□□□ 0.78
SEC22A-208ENST00000487572 CD160O95971 181 aa19.95■□□□□ 0.78
SEC22A-208ENST00000487572 CTNNA1P35221 906 aaKnown RBP19.95■□□□□ 0.78
SEC22A-208ENST00000487572 USP39Q53GS9 565 aaKnown RBP19.95■□□□□ 0.78
SEC22A-208ENST00000487572 RNF10Q8N5U6 811 aaKnown RBP19.95■□□□□ 0.78
SEC22A-208ENST00000487572 RSPH9Q9H1X1 276 aaPredicted RBP19.95■□□□□ 0.78
SEC22A-208ENST00000487572 FBRSQ9HAH7 460 aa19.95■□□□□ 0.78
SEC22A-208ENST00000487572 CD93Q9NPY3 652 aa19.95■□□□□ 0.78
SEC22A-208ENST00000487572 UBA2Q9UBT2 640 aaPredicted RBP19.95■□□□□ 0.78
SEC22A-208ENST00000487572 AMFRQ9UKV5 643 aa19.95■□□□□ 0.78
SEC22A-208ENST00000487572 PACSIN2Q9UNF0 486 aaPredicted RBP19.95■□□□□ 0.78
SEC22A-208ENST00000487572 CYP8B1Q9UNU6 501 aa19.95■□□□□ 0.78
SEC22A-208ENST00000487572 CKAP5Q14008 2032 aa19.95■□□□□ 0.78
SEC22A-208ENST00000487572 HRO43593 1189 aa19.94■□□□□ 0.78
SEC22A-208ENST00000487572 PRAMEF11O60813 436 aa19.94■□□□□ 0.78
SEC22A-208ENST00000487572 LILRB5O75023 590 aa19.94■□□□□ 0.78
SEC22A-208ENST00000487572 TMCC1O94876 653 aa19.94■□□□□ 0.78
SEC22A-208ENST00000487572 ZRANB2O95218 330 aaKnown RBP eCLIP19.94■□□□□ 0.78
SEC22A-208ENST00000487572 ACADMP11310 421 aa19.94■□□□□ 0.78
SEC22A-208ENST00000487572 CTNNA2P26232 953 aa19.94■□□□□ 0.78
SEC22A-208ENST00000487572 RECQLP46063 649 aaPredicted RBP19.94■□□□□ 0.78
SEC22A-208ENST00000487572 PSMD8P48556 350 aa19.94■□□□□ 0.78
SEC22A-208ENST00000487572 RPS14P62263 151 aaKnown RBP19.94■□□□□ 0.78
SEC22A-208ENST00000487572 DYNLT1P63172 113 aa19.94■□□□□ 0.78
SEC22A-208ENST00000487572 CCDC173Q0VFZ6 552 aa19.94■□□□□ 0.78
SEC22A-208ENST00000487572 ELAVL3Q14576 367 aaKnown RBP19.94■□□□□ 0.78
SEC22A-208ENST00000487572 ZNF776Q68DI1 518 aaPredicted RBP19.94■□□□□ 0.78
SEC22A-208ENST00000487572 SPOCD1Q6ZMY3 1216 aa19.94■□□□□ 0.78
SEC22A-208ENST00000487572 CEP68Q76N32 757 aa19.94■□□□□ 0.78
SEC22A-208ENST00000487572 NT5DC3Q86UY8 548 aa19.94■□□□□ 0.78
SEC22A-208ENST00000487572 MMAAQ8IVH4 418 aaKnown RBP19.94■□□□□ 0.78
SEC22A-208ENST00000487572 RCOR2Q8IZ40 523 aa19.94■□□□□ 0.78
SEC22A-208ENST00000487572 ATPAF2Q8N5M1 289 aa19.94■□□□□ 0.78
SEC22A-208ENST00000487572 FAM160A2Q8N612 972 aaPredicted RBP19.94■□□□□ 0.78
SEC22A-208ENST00000487572 GAB3Q8WWW8 586 aa19.94■□□□□ 0.78
SEC22A-208ENST00000487572 OR8D1Q8WZ84 308 aa19.94■□□□□ 0.78
SEC22A-208ENST00000487572 CCDC114Q96M63 670 aa19.94■□□□□ 0.78
SEC22A-208ENST00000487572 TM6SF2Q9BZW4 377 aa19.94■□□□□ 0.78
SEC22A-208ENST00000487572 CEP44Q9C0F1 390 aa19.94■□□□□ 0.78
SEC22A-208ENST00000487572 IPO11Q9UI26 975 aaKnown RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms