RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 CDRT15L2A8MXV6 281 aa15.75■□□□□ 0.11
MCF2L-228ENST00000487354 E5RJQ4 531 aa15.75■□□□□ 0.11
MCF2L-228ENST00000487354 SART1O43290 800 aaKnown RBP15.75■□□□□ 0.11
MCF2L-228ENST00000487354 SRCP12931 536 aa15.75■□□□□ 0.11
MCF2L-228ENST00000487354 HNRNPA2B1P22626 353 aaKnown RBP15.75■□□□□ 0.11
MCF2L-228ENST00000487354 GGCXP38435 758 aa15.75■□□□□ 0.11
MCF2L-228ENST00000487354 PNOCQ13519 176 aa15.75■□□□□ 0.11
MCF2L-228ENST00000487354 FZD2Q14332 565 aa15.75■□□□□ 0.11
MCF2L-228ENST00000487354 ACCSLQ4AC99 568 aa15.75■□□□□ 0.11
MCF2L-228ENST00000487354 C3orf38Q5JPI3 329 aa15.75■□□□□ 0.11
MCF2L-228ENST00000487354 TTC39BQ5VTQ0 682 aaPredicted RBP15.75■□□□□ 0.11
MCF2L-228ENST00000487354 OR6B2Q6IFH4 312 aa15.75■□□□□ 0.11
MCF2L-228ENST00000487354 NEK5Q6P3R8 708 aa15.75■□□□□ 0.11
MCF2L-228ENST00000487354 RRAGAQ7L523 313 aa15.75■□□□□ 0.11
MCF2L-228ENST00000487354 PPM1KQ8N3J5 372 aa15.75■□□□□ 0.11
MCF2L-228ENST00000487354 ZNF548Q8NEK5 533 aaPredicted RBP15.75■□□□□ 0.11
MCF2L-228ENST00000487354 OR2A12Q8NGT7 310 aa15.75■□□□□ 0.11
MCF2L-228ENST00000487354 IFT43Q96FT9 208 aa15.75■□□□□ 0.11
MCF2L-228ENST00000487354 MED8Q96G25 268 aa15.75■□□□□ 0.11
MCF2L-228ENST00000487354 ATXN7L3BQ96GX2 97 aa15.75■□□□□ 0.11
MCF2L-228ENST00000487354 BMFQ96LC9 184 aa15.75■□□□□ 0.11
MCF2L-228ENST00000487354 SPATA32Q96LK8 384 aa15.75■□□□□ 0.11
MCF2L-228ENST00000487354 SLC46A1Q96NT5 459 aa15.75■□□□□ 0.11
MCF2L-228ENST00000487354 OSBPL2Q9H1P3 480 aa15.75■□□□□ 0.11
MCF2L-228ENST00000487354 POPDC2Q9HBU9 364 aa15.75■□□□□ 0.11
MCF2L-228ENST00000487354 ST7Q9NRC1 585 aa15.75■□□□□ 0.11
MCF2L-228ENST00000487354 THSD1Q9NS62 852 aa15.75■□□□□ 0.11
MCF2L-228ENST00000487354 ARMCX3Q9UH62 379 aaPredicted RBP15.75■□□□□ 0.11
MCF2L-228ENST00000487354 SLC25A13Q9UJS0 675 aa15.75■□□□□ 0.11
MCF2L-228ENST00000487354 HS3ST2Q9Y278 367 aa15.75■□□□□ 0.11
MCF2L-228ENST00000487354 TLN1Q9Y490 2541 aaKnown RBP15.74■□□□□ 0.11
MCF2L-228ENST00000487354 K7ERQ8 282 aa15.74■□□□□ 0.11
MCF2L-228ENST00000487354 RAD51BO15315 384 aa15.74■□□□□ 0.11
MCF2L-228ENST00000487354 ARHGAP6O43182 974 aa15.74■□□□□ 0.11
MCF2L-228ENST00000487354 ZNF202O95125 648 aa15.74■□□□□ 0.11
MCF2L-228ENST00000487354 FKBP3Q00688 224 aaKnown RBP15.74■□□□□ 0.11
MCF2L-228ENST00000487354 AUHQ13825 339 aaKnown RBP15.74■□□□□ 0.11
MCF2L-228ENST00000487354 C5orf22Q49AR2 442 aa15.74■□□□□ 0.11
MCF2L-228ENST00000487354 ARTNQ5T4W7 220 aa15.74■□□□□ 0.11
MCF2L-228ENST00000487354 OTUD1Q5VV17 481 aaPredicted RBP15.74■□□□□ 0.11
MCF2L-228ENST00000487354 GUSBP11Q6P575 273 aa15.74■□□□□ 0.11
MCF2L-228ENST00000487354 C14orf80Q86SX3 495 aa15.74■□□□□ 0.11
MCF2L-228ENST00000487354 TMEM110Q86TL2 294 aa15.74■□□□□ 0.11
MCF2L-228ENST00000487354 ATP6V0D2Q8N8Y2 350 aa15.74■□□□□ 0.11
MCF2L-228ENST00000487354 CHST14Q8NCH0 376 aa15.74■□□□□ 0.11
MCF2L-228ENST00000487354 MAPK15Q8TD08 544 aa15.74■□□□□ 0.11
MCF2L-228ENST00000487354 SLC2A13Q96QE2 648 aa15.74■□□□□ 0.11
MCF2L-228ENST00000487354 USP29Q9HBJ7 922 aa15.74■□□□□ 0.11
MCF2L-228ENST00000487354 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.74■□□□□ 0.11
MCF2L-228ENST00000487354 TBC1D30Q9Y2I9 924 aa15.74■□□□□ 0.11
MCF2L-228ENST00000487354 AHCTF1Q8WYP5 2266 aa15.73■□□□□ 0.11
MCF2L-228ENST00000487354 A0A1W2PQ27 194 aa15.73■□□□□ 0.11
MCF2L-228ENST00000487354 A0A1W2PQ64 194 aa15.73■□□□□ 0.11
MCF2L-228ENST00000487354 POM121BA6NF01 834 aa15.73■□□□□ 0.11
MCF2L-228ENST00000487354 I6L893 689 aaPredicted RBP15.73■□□□□ 0.11
MCF2L-228ENST00000487354 SMAD6O43541 496 aaKnown RBP15.73■□□□□ 0.11
MCF2L-228ENST00000487354 SNAP91O60641 907 aa15.73■□□□□ 0.11
MCF2L-228ENST00000487354 WISP1O95388 367 aa15.73■□□□□ 0.11
MCF2L-228ENST00000487354 NME1P15531 152 aaKnown RBP15.73■□□□□ 0.11
MCF2L-228ENST00000487354 AKT2P31751 481 aa15.73■□□□□ 0.11
MCF2L-228ENST00000487354 CHRNA3P32297 505 aa15.73■□□□□ 0.11
MCF2L-228ENST00000487354 ACADSBP45954 432 aa15.73■□□□□ 0.11
MCF2L-228ENST00000487354 YWHAZP63104 245 aaKnown RBP15.73■□□□□ 0.11
MCF2L-228ENST00000487354 GCNT1Q02742 428 aa15.73■□□□□ 0.11
MCF2L-228ENST00000487354 CLN3Q13286 438 aa15.73■□□□□ 0.11
MCF2L-228ENST00000487354 DRAP1Q14919 205 aaPredicted RBP15.73■□□□□ 0.11
MCF2L-228ENST00000487354 RABGAP1LQ5R372 815 aa15.73■□□□□ 0.11
MCF2L-228ENST00000487354 Q6ZSR6 202 aa15.73■□□□□ 0.11
MCF2L-228ENST00000487354 CLEC14AQ86T13 490 aa15.73■□□□□ 0.11
MCF2L-228ENST00000487354 STK32AQ8WU08 396 aa15.73■□□□□ 0.11
MCF2L-228ENST00000487354 RPRD1AQ96P16 312 aaPredicted RBP15.73■□□□□ 0.11
MCF2L-228ENST00000487354 METTL14Q9HCE5 456 aaKnown RBP15.73■□□□□ 0.11
MCF2L-228ENST00000487354 ACP6Q9NPH0 428 aa15.73■□□□□ 0.11
MCF2L-228ENST00000487354 ANLNQ9NQW6 1124 aa15.73■□□□□ 0.11
MCF2L-228ENST00000487354 DNAJC28Q9NX36 388 aa15.73■□□□□ 0.11
MCF2L-228ENST00000487354 VPS28Q9UK41 221 aa15.73■□□□□ 0.11
MCF2L-228ENST00000487354 VANGL2Q9ULK5 521 aa15.73■□□□□ 0.11
MCF2L-228ENST00000487354 PCDHGA8Q9Y5G5 932 aa15.73■□□□□ 0.11
MCF2L-228ENST00000487354 HS3ST4Q9Y661 456 aa15.73■□□□□ 0.11
MCF2L-228ENST00000487354 LRRK1Q38SD2 2015 aa15.72■□□□□ 0.11
MCF2L-228ENST00000487354 A6NNZ2 444 aa15.72■□□□□ 0.11
MCF2L-228ENST00000487354 KPNA3O00505 521 aaPredicted RBP15.72■□□□□ 0.11
MCF2L-228ENST00000487354 SPINT1O43278 529 aa15.72■□□□□ 0.11
MCF2L-228ENST00000487354 EFSO43281 561 aa15.72■□□□□ 0.11
MCF2L-228ENST00000487354 SLC28A2O43868 658 aa15.72■□□□□ 0.11
MCF2L-228ENST00000487354 BNIP3LO60238 219 aa15.72■□□□□ 0.11
MCF2L-228ENST00000487354 ZNF821O75541 412 aaPredicted RBP15.72■□□□□ 0.11
MCF2L-228ENST00000487354 CNTN5O94779 1100 aa15.72■□□□□ 0.11
MCF2L-228ENST00000487354 CSF2P04141 144 aa15.72■□□□□ 0.11
MCF2L-228ENST00000487354 ALPPL2P10696 532 aa15.72■□□□□ 0.11
MCF2L-228ENST00000487354 OXCT1P55809 520 aa15.72■□□□□ 0.11
MCF2L-228ENST00000487354 NUCB2P80303 420 aa15.72■□□□□ 0.11
MCF2L-228ENST00000487354 KCNC4Q03721 635 aa15.72■□□□□ 0.11
MCF2L-228ENST00000487354 MEA1Q16626 185 aa15.72■□□□□ 0.11
MCF2L-228ENST00000487354 CDKN3Q16667 212 aa15.72■□□□□ 0.11
MCF2L-228ENST00000487354 HS1BP3Q53T59 392 aa15.72■□□□□ 0.11
MCF2L-228ENST00000487354 PERM1Q5SV97 790 aa15.72■□□□□ 0.11
MCF2L-228ENST00000487354 ZNF658Q5TYW1 1059 aaPredicted RBP15.72■□□□□ 0.11
MCF2L-228ENST00000487354 ZCCHC8Q6NZY4 707 aaKnown RBP15.72■□□□□ 0.11
MCF2L-228ENST00000487354 KYAT3Q6YP21 454 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms