RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 POM121BA6NF01 834 aa15.3■□□□□ 0.04
PFDN4-204ENST00000487129 TCAF2A6NFQ2 919 aa15.3■□□□□ 0.04
PFDN4-204ENST00000487129 NEMP2A6NFY4 417 aa15.3■□□□□ 0.04
PFDN4-204ENST00000487129 NOBOXO60393 691 aa15.3■□□□□ 0.04
PFDN4-204ENST00000487129 CSF2P04141 144 aa15.3■□□□□ 0.04
PFDN4-204ENST00000487129 NME1P15531 152 aaKnown RBP15.3■□□□□ 0.04
PFDN4-204ENST00000487129 BRD2P25440 801 aaKnown RBP15.3■□□□□ 0.04
PFDN4-204ENST00000487129 AKT2P31751 481 aa15.3■□□□□ 0.04
PFDN4-204ENST00000487129 RP1P56715 2156 aa15.3■□□□□ 0.04
PFDN4-204ENST00000487129 CENPCQ03188 943 aa15.3■□□□□ 0.04
PFDN4-204ENST00000487129 SRSF6Q13247 344 aaKnown RBP15.3■□□□□ 0.04
PFDN4-204ENST00000487129 PERM1Q5SV97 790 aa15.3■□□□□ 0.04
PFDN4-204ENST00000487129 OR6B2Q6IFH4 312 aa15.3■□□□□ 0.04
PFDN4-204ENST00000487129 TMEM270Q6UE05 265 aa15.3■□□□□ 0.04
PFDN4-204ENST00000487129 Q6ZSR6 202 aa15.3■□□□□ 0.04
PFDN4-204ENST00000487129 EFL1Q7Z2Z2 1120 aaKnown RBP15.3■□□□□ 0.04
PFDN4-204ENST00000487129 SH2D3CQ8N5H7 860 aa15.3■□□□□ 0.04
PFDN4-204ENST00000487129 KAT5Q92993 513 aa15.3■□□□□ 0.04
PFDN4-204ENST00000487129 CCNL2Q96S94 520 aaPredicted RBP15.3■□□□□ 0.04
PFDN4-204ENST00000487129 FEM1AQ9BSK4 669 aa15.3■□□□□ 0.04
PFDN4-204ENST00000487129 DNAJC28Q9NX36 388 aa15.3■□□□□ 0.04
PFDN4-204ENST00000487129 RCOR1Q9UKL0 485 aa15.3■□□□□ 0.04
PFDN4-204ENST00000487129 ATXN7L1Q9ULK2 861 aaPredicted RBP15.3■□□□□ 0.04
PFDN4-204ENST00000487129 KCNU1A8MYU2 1149 aa15.29■□□□□ 0.04
PFDN4-204ENST00000487129 F5H5T6 163 aa15.29■□□□□ 0.04
PFDN4-204ENST00000487129 RAD51BO15315 384 aa15.29■□□□□ 0.04
PFDN4-204ENST00000487129 SUV39H1O43463 412 aa15.29■□□□□ 0.04
PFDN4-204ENST00000487129 STX10O60499 249 aa15.29■□□□□ 0.04
PFDN4-204ENST00000487129 MT-CO1P00395 513 aa15.29■□□□□ 0.04
PFDN4-204ENST00000487129 APOEP02649 317 aa15.29■□□□□ 0.04
PFDN4-204ENST00000487129 MLLT3P42568 568 aaPredicted RBP15.29■□□□□ 0.04
PFDN4-204ENST00000487129 HNRNPKP61978 463 aaKnown RBP eCLIP15.29■□□□□ 0.04
PFDN4-204ENST00000487129 YWHAEP62258 255 aaKnown RBP15.29■□□□□ 0.04
PFDN4-204ENST00000487129 LRMPQ12912 555 aa15.29■□□□□ 0.04
PFDN4-204ENST00000487129 ACCSLQ4AC99 568 aa15.29■□□□□ 0.04
PFDN4-204ENST00000487129 FBXL22Q6P050 247 aa15.29■□□□□ 0.04
PFDN4-204ENST00000487129 CRTC1Q6UUV9 634 aa15.29■□□□□ 0.04
PFDN4-204ENST00000487129 KYAT3Q6YP21 454 aaKnown RBP15.29■□□□□ 0.04
PFDN4-204ENST00000487129 RBM44Q6ZP01 1051 aaKnown RBP15.29■□□□□ 0.04
PFDN4-204ENST00000487129 OR2A12Q8NGT7 310 aa15.29■□□□□ 0.04
PFDN4-204ENST00000487129 FAM149B1Q96BN6 582 aa15.29■□□□□ 0.04
PFDN4-204ENST00000487129 USP25Q9UHP3 1055 aa15.29■□□□□ 0.04
PFDN4-204ENST00000487129 HS3ST2Q9Y278 367 aa15.29■□□□□ 0.04
PFDN4-204ENST00000487129 CSNK1G3Q9Y6M4 447 aa15.29■□□□□ 0.04
PFDN4-204ENST00000487129 RELNP78509 3460 aa15.29■□□□□ 0.04
PFDN4-204ENST00000487129 SPTY2D1-AS1A0A0U1RR47 76 aa15.28■□□□□ 0.04
PFDN4-204ENST00000487129 CPED1A4D0V7 1026 aa15.28■□□□□ 0.04
PFDN4-204ENST00000487129 A6NNZ2 444 aa15.28■□□□□ 0.04
PFDN4-204ENST00000487129 TCEA3O75764 348 aa15.28■□□□□ 0.04
PFDN4-204ENST00000487129 TNFSF15O95150 251 aa15.28■□□□□ 0.04
PFDN4-204ENST00000487129 TRUB2O95900 331 aaKnown RBP15.28■□□□□ 0.04
PFDN4-204ENST00000487129 HSP90AA1P07900 732 aaKnown RBP15.28■□□□□ 0.04
PFDN4-204ENST00000487129 ITGA2BP08514 1039 aa15.28■□□□□ 0.04
PFDN4-204ENST00000487129 SRCP12931 536 aa15.28■□□□□ 0.04
PFDN4-204ENST00000487129 TBXAS1P24557 533 aaPredicted RBP15.28■□□□□ 0.04
PFDN4-204ENST00000487129 GPD2P43304 727 aa15.28■□□□□ 0.04
PFDN4-204ENST00000487129 ZSCAN23Q3MJ62 389 aa15.28■□□□□ 0.04
PFDN4-204ENST00000487129 DCAF17Q5H9S7 520 aaPredicted RBP15.28■□□□□ 0.04
PFDN4-204ENST00000487129 SMYD4Q8IYR2 804 aaPredicted RBP15.28■□□□□ 0.04
PFDN4-204ENST00000487129 WDR36Q8NI36 951 aaKnown RBP15.28■□□□□ 0.04
PFDN4-204ENST00000487129 SLC35C1Q96A29 364 aa15.28■□□□□ 0.04
PFDN4-204ENST00000487129 PSMB7Q99436 277 aa15.28■□□□□ 0.04
PFDN4-204ENST00000487129 BOCQ9BWV1 1114 aa15.28■□□□□ 0.04
PFDN4-204ENST00000487129 SALL4Q9UJQ4 1053 aa15.28■□□□□ 0.04
PFDN4-204ENST00000487129 PNMA8BQ9ULN7 279 aaPredicted RBP15.28■□□□□ 0.04
PFDN4-204ENST00000487129 TEX15Q9BXT5 2789 aa15.27■□□□□ 0.04
PFDN4-204ENST00000487129 FAM237AA0A1B0GTK4 181 aa15.27■□□□□ 0.04
PFDN4-204ENST00000487129 K7ERQ8 282 aa15.27■□□□□ 0.04
PFDN4-204ENST00000487129 SPINT1O43278 529 aa15.27■□□□□ 0.04
PFDN4-204ENST00000487129 F13A1P00488 732 aa15.27■□□□□ 0.04
PFDN4-204ENST00000487129 ZSCAN22P10073 491 aaPredicted RBP15.27■□□□□ 0.04
PFDN4-204ENST00000487129 EPB41P11171 864 aaKnown RBP15.27■□□□□ 0.04
PFDN4-204ENST00000487129 CMA1P23946 247 aa15.27■□□□□ 0.04
PFDN4-204ENST00000487129 CHRNA3P32297 505 aa15.27■□□□□ 0.04
PFDN4-204ENST00000487129 DNM1Q05193 864 aaKnown RBP15.27■□□□□ 0.04
PFDN4-204ENST00000487129 PKP1Q13835 747 aa15.27■□□□□ 0.04
PFDN4-204ENST00000487129 DEFB133Q30KQ1 61 aa15.27■□□□□ 0.04
PFDN4-204ENST00000487129 C6orf132Q5T0Z8 1188 aa15.27■□□□□ 0.04
PFDN4-204ENST00000487129 TTC39BQ5VTQ0 682 aaPredicted RBP15.27■□□□□ 0.04
PFDN4-204ENST00000487129 PTAR1Q7Z6K3 402 aaPredicted RBP15.27■□□□□ 0.04
PFDN4-204ENST00000487129 PARGQ86W56 976 aa15.27■□□□□ 0.04
PFDN4-204ENST00000487129 DCP2Q8IU60 420 aaKnown RBP15.27■□□□□ 0.04
PFDN4-204ENST00000487129 ARL14Q8N4G2 192 aa15.27■□□□□ 0.04
PFDN4-204ENST00000487129 CHST14Q8NCH0 376 aa15.27■□□□□ 0.04
PFDN4-204ENST00000487129 TMIEQ8NEW7 156 aa15.27■□□□□ 0.04
PFDN4-204ENST00000487129 KLF6Q99612 283 aaPredicted RBP15.27■□□□□ 0.04
PFDN4-204ENST00000487129 FAM117AQ9C073 453 aa15.27■□□□□ 0.04
PFDN4-204ENST00000487129 EVA1BQ9NVM1 165 aa15.27■□□□□ 0.04
PFDN4-204ENST00000487129 SLC25A13Q9UJS0 675 aa15.27■□□□□ 0.04
PFDN4-204ENST00000487129 HEMK1Q9Y5R4 338 aaPredicted RBP15.27■□□□□ 0.04
PFDN4-204ENST00000487129 HS3ST3A1Q9Y663 406 aa15.27■□□□□ 0.04
PFDN4-204ENST00000487129 LRRK2Q5S007 2527 aa15.27■□□□□ 0.03
PFDN4-204ENST00000487129 CCDC187A0A096LP49 1063 aa15.26■□□□□ 0.03
PFDN4-204ENST00000487129 KPNA3O00505 521 aaPredicted RBP15.26■□□□□ 0.03
PFDN4-204ENST00000487129 NTN3O00634 580 aaPredicted RBP15.26■□□□□ 0.03
PFDN4-204ENST00000487129 AQP9O43315 295 aa15.26■□□□□ 0.03
PFDN4-204ENST00000487129 BNIP3LO60238 219 aa15.26■□□□□ 0.03
PFDN4-204ENST00000487129 SNAP91O60641 907 aa15.26■□□□□ 0.03
PFDN4-204ENST00000487129 ZNF18P17022 549 aa15.26■□□□□ 0.03
PFDN4-204ENST00000487129 OXCT1P55809 520 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms