RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	WDR24	Q96S15	920 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	HAPLN3	Q96S86	360 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	GABRG3	Q99928	467 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	MAGEB5	Q9BZ81	275 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	DDX56	Q9NY93	547 aa	Known RBP	13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	CYP8B1	Q9UNU6	501 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	JRKL	Q9Y4A0	524 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	PCDHA3	Q9Y5H8	950 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	CACNA1G	O43497	2377 aa		13.43	□□□□□ -0.26
NR1H3-223	ENST00000486991	ITPR1	Q14643	2758 aa		13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	IGHV1OR15-9	A0A0B4J2B8	117 aa		13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	GOLGA6L7	A0A1B0GV03	622 aa		13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	ESPN	B1AK53	854 aa		13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	WASH3P	C4AMC7	463 aa		13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	DDX3Y	O15523	660 aa	Known RBP	13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	NDUFV2	P19404	249 aa		13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	DPP6	P42658	865 aa		13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	CDH6	P55285	790 aa		13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	ETF1	P62495	437 aa	Known RBP	13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	SIM1	P81133	766 aa	Predicted RBP	13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	SCAP	Q12770	1279 aa		13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	LMAN2	Q12907	356 aa		13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	SEMA3B	Q13214	749 aa		13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	MTA1	Q13330	715 aa		13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	KRT81	Q14533	505 aa		13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	PPP6R3	Q5H9R7	873 aa	Predicted RBP	13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	PIK3R6	Q5UE93	754 aa		13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	RAP1GAP2	Q684P5	730 aa		13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	RFWD3	Q6PCD5	774 aa		13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	NYAP1	Q6ZVC0	841 aa		13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	CHSY1	Q86X52	802 aa		13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	PSTK	Q8IV42	348 aa	Known RBP	13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	SLC41A1	Q8IVJ1	513 aa		13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	CHPF	Q8IZ52	775 aa		13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	ZNF557	Q8N988	423 aa	Predicted RBP	13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	KCTD6	Q8NC69	237 aa		13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	HES6	Q96HZ4	224 aa		13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	LMLN	Q96KR4	655 aa		13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	CAMK1G	Q96NX5	476 aa		13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	KCTD15	Q96SI1	283 aa	Predicted RBP	13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	DDX50	Q9BQ39	737 aa	Known RBP	13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	TLR10	Q9BXR5	811 aa		13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	SLC2A11	Q9BYW1	496 aa		13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	DNAI1	Q9UI46	699 aa		13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	HS3ST4	Q9Y661	456 aa		13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	ZFYVE26	Q68DK2	2539 aa		13.42	□□□□□ -0.26
NR1H3-223	ENST00000486991	CHD5	Q8TDI0	1954 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	LRRD1	A4D1F6	860 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	SRRM3	A6NNA2	597 aa	Predicted RBP	13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	TIMM44	O43615	452 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	CREB3	O43889	395 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	TSPAN3	O60637	253 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	SRGAP2	O75044	1071 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	ZNF217	O75362	1048 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	ATP1A1	P05023	1023 aa	Known RBP	13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	TACR2	P21452	398 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	HLA-F	P30511	346 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	CASQ1	P31415	396 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	L1CAM	P32004	1257 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	RWDD2B	P57060	319 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	ZNF33A	Q06730	810 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	MS4A13	Q5J8X5	152 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	SYT10	Q6XYQ8	523 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	ANKS1B	Q7Z6G8	1248 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	C14orf80	Q86SX3	495 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	CCDC50	Q8IVM0	306 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	KATNAL2	Q8IYT4	538 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	CHCHD4	Q8N4Q1	142 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	DDI1	Q8WTU0	396 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	UBE2Q2	Q8WVN8	375 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	RAPGEF5	Q92565	580 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	ALG3	Q92685	438 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	AZIN2	Q96A70	460 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	RNF25	Q96BH1	459 aa	Predicted RBP	13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	PSMB7	Q99436	277 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	NAPG	Q99747	312 aa	Predicted RBP	13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	OSBPL2	Q9H1P3	480 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	PCDH18	Q9HCL0	1135 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	CACNA2D2	Q9NY47	1150 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	THAP10	Q9P2Z0	257 aa	Predicted RBP	13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	OR12D3	Q9UGF7	316 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	SLC6A14	Q9UN76	642 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	FREM2	Q5SZK8	3169 aa		13.41	□□□□□ -0.26
NR1H3-223	ENST00000486991	PCDH15	Q96QU1	1955 aa		13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	CTAGE9	A4FU28	777 aa		13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991		F5H5T6	163 aa		13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	FAM72C	H0Y354	149 aa		13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	KCNK3	O14649	394 aa		13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	ZRANB2	O95218	330 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	CD48	P09326	243 aa		13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	KDELR1	P24390	212 aa		13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	MAOB	P27338	520 aa		13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	ARL4A	P40617	200 aa		13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	PEX5	P50542	639 aa		13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	AUH	Q13825	339 aa	Known RBP	13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	STARD3	Q14849	445 aa		13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms