RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 KCNK1O00180 336 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 MTSS1O43312 755 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 ASLP04424 464 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 DLDP09622 509 aaKnown RBP9.76□□□□□ -0.85
MCF2L-227ENST00000486806 CTAGE8P0CG41 777 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 PTPN3P26045 913 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 KCNJ1P48048 391 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 STK19P49842 368 aaPredicted RBP9.76□□□□□ -0.85
MCF2L-227ENST00000486806 SERPINH1P50454 418 aaKnown RBP9.76□□□□□ -0.85
MCF2L-227ENST00000486806 GALK1P51570 392 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 NRLP54845 237 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 SULT2A1Q06520 285 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 HNRNPDQ14103 355 aaKnown RBP9.76□□□□□ -0.85
MCF2L-227ENST00000486806 SLC44A4Q53GD3 710 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 INO80DQ53TQ3 878 aaPredicted RBP9.76□□□□□ -0.85
MCF2L-227ENST00000486806 TJAP1Q5JTD0 557 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 TMCO4Q5TGY1 634 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 HEATR6Q6AI08 1181 aaKnown RBP9.76□□□□□ -0.85
MCF2L-227ENST00000486806 FSTL4Q6MZW2 842 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 RETSATQ6NUM9 610 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 DARS2Q6PI48 645 aaKnown RBP9.76□□□□□ -0.85
MCF2L-227ENST00000486806 LINGO4Q6UY18 593 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 TPRG1Q6ZUI0 275 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 CTAGE6Q86UF2 777 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 ZNF354CQ86Y25 554 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.76□□□□□ -0.85
MCF2L-227ENST00000486806 CTAGE4Q8IX94 777 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 UBALD2Q8IYN6 164 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 ZNF687Q8N1G0 1237 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 NOA1Q8NC60 698 aaKnown RBP9.76□□□□□ -0.85
MCF2L-227ENST00000486806 LRRN4CLQ8ND94 238 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 ATL2Q8NHH9 583 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 CASKIN2Q8WXE0 1202 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 RUNDC3BQ96NL0 473 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 IL12RB2Q99665 862 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 CARD6Q9BX69 1037 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 ARHGEF3Q9NR81 526 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 ELOVL2Q9NXB9 296 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 UBA2Q9UBT2 640 aaPredicted RBP9.76□□□□□ -0.85
MCF2L-227ENST00000486806 WNT16Q9UBV4 365 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 HCN2Q9UL51 889 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 HPCAL4Q9UM19 191 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 STARD13Q9Y3M8 1113 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 MUC3AQ02505 3323 aa9.76□□□□□ -0.85
MCF2L-227ENST00000486806 KRBA1A5PL33 1030 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 C5orf60A6NFR6 353 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 K7EQS6 105 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 RNF103O00237 685 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 MUSKO15146 869 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 KCNN4O15554 427 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 TIMM44O43615 452 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 ZNF821O75541 412 aaPredicted RBP9.75□□□□□ -0.85
MCF2L-227ENST00000486806 TMCC1O94876 653 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 MT-CO1P00395 513 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 APODP05090 189 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 HLA-DQB2P05538 268 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 ATP5BP06576 529 aaKnown RBP9.75□□□□□ -0.85
MCF2L-227ENST00000486806 SRCP12931 536 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 CCNB1P14635 433 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 POLR2EP19388 210 aaKnown RBP9.75□□□□□ -0.85
MCF2L-227ENST00000486806 STIP1P31948 543 aaKnown RBP9.75□□□□□ -0.85
MCF2L-227ENST00000486806 PTGIRP43119 386 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 KIR2DL1P43626 348 aaPredicted RBP9.75□□□□□ -0.85
MCF2L-227ENST00000486806 GEMIN4P57678 1058 aaKnown RBP9.75□□□□□ -0.85
MCF2L-227ENST00000486806 ECT2LQ008S8 904 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 LMNB2Q03252 620 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 PRKCQQ04759 706 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 SLC20A2Q08357 652 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 SLC10A7Q0GE19 358 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 CCINQ13939 588 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 DHX34Q14147 1143 aaKnown RBP9.75□□□□□ -0.85
MCF2L-227ENST00000486806 LBRQ14739 615 aaKnown RBP9.75□□□□□ -0.85
MCF2L-227ENST00000486806 PON2Q15165 354 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 P3H1Q32P28 736 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 ALG1LQ6GMV1 187 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 LEKR1Q6ZMV7 388 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 METTL3Q86U44 580 aaKnown RBP9.75□□□□□ -0.85
MCF2L-227ENST00000486806 KLHL7Q8IXQ5 586 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 CCDC105Q8IYK2 499 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 ZNF567Q8N184 647 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 MMGT1Q8N4V1 131 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 SH2D3CQ8N5H7 860 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 CNTD1Q8N815 330 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 FAM71DQ8N9W8 422 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 KDM1BQ8NB78 822 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 GLIS1Q8NBF1 620 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 GRK7Q8WTQ7 553 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 SORCS1Q8WY21 1168 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 EXOC4Q96A65 974 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 CCDC114Q96M63 670 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 SPATA13Q96N96 652 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 NECAB3Q96P71 396 aaPredicted RBP9.75□□□□□ -0.85
MCF2L-227ENST00000486806 PSKH2Q96QS6 385 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 KRT12Q99456 494 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 VAT1Q99536 393 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 MGME1Q9BQP7 344 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 CEP41Q9BYV8 373 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 CIPCQ9C0C6 399 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 AMACRQ9UHK6 382 aa9.75□□□□□ -0.85
MCF2L-227ENST00000486806 MUTYHQ9UIF7 546 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms