RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 AZIN2Q96A70 460 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 ZPBPQ9BS86 351 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 VCXQ9H320 206 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 ACSS3Q9H6R3 686 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 CRLF2Q9HC73 371 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 DCTN4Q9UJW0 460 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 DNAJC16Q9Y2G8 782 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 ATP2C2O75185 946 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 TGDSO95455 350 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 CRYZL1O95825 349 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 ECDO95905 644 aaPredicted RBP9.42□□□□□ -0.9
USP16-206ENST00000485067 CD48P09326 243 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 ALADP13716 330 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 PDGFRAP16234 1089 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 GDF10P55107 478 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 WDR4P57081 412 aaKnown RBP9.42□□□□□ -0.9
USP16-206ENST00000485067 GPX6P59796 221 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 RACK1P63244 317 aaKnown RBP9.42□□□□□ -0.9
USP16-206ENST00000485067 DPYSL3Q14195 570 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 DSC3Q14574 896 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 ZNF124Q15973 351 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 PDK4Q16654 411 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 FUT11Q495W5 492 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 FAM182AQ5T1J6 154 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 OR6B2Q6IFH4 312 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 ADGRD1Q6QNK2 874 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 PALM2Q8IXS6 379 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 CCDC63Q8NA47 563 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 IFT43Q96FT9 208 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 DHRS4Q9BTZ2 278 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 IFT22Q9H7X7 185 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 GBA2Q9HCG7 927 aaPredicted RBP9.42□□□□□ -0.9
USP16-206ENST00000485067 TRPM5Q9NZQ8 1165 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 SAE1Q9UBE0 346 aaPredicted RBP9.42□□□□□ -0.9
USP16-206ENST00000485067 CPA4Q9UI42 421 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 TEKT2Q9UIF3 430 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 TSPAN16Q9UKR8 245 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 GINS2Q9Y248 185 aa9.42□□□□□ -0.9
USP16-206ENST00000485067 SCN4AP35499 1836 aa9.41□□□□□ -0.9
USP16-206ENST00000485067 CLUHO75153 1309 aa9.41□□□□□ -0.9
USP16-206ENST00000485067 FOXO6A8MYZ6 492 aa9.41□□□□□ -0.9
USP16-206ENST00000485067 CHADO15335 359 aa9.41□□□□□ -0.9
USP16-206ENST00000485067 TOMM70O94826 608 aa9.41□□□□□ -0.9
USP16-206ENST00000485067 HOXD8P13378 290 aaPredicted RBP9.41□□□□□ -0.9
USP16-206ENST00000485067 TMEM11P17152 192 aa9.41□□□□□ -0.9
USP16-206ENST00000485067 TGM2P21980 687 aa9.41□□□□□ -0.9
USP16-206ENST00000485067 GSTT1P30711 240 aa9.41□□□□□ -0.9
USP16-206ENST00000485067 CDH6P55285 790 aa9.41□□□□□ -0.9
USP16-206ENST00000485067 NR6A1Q15406 480 aa9.41□□□□□ -0.9
USP16-206ENST00000485067 SETMARQ53H47 684 aaPredicted RBP9.41□□□□□ -0.9
USP16-206ENST00000485067 FNBP1LQ5T0N5 605 aa9.41□□□□□ -0.9
USP16-206ENST00000485067 PRPF38BQ5VTL8 546 aaKnown RBP9.41□□□□□ -0.9
USP16-206ENST00000485067 DARS2Q6PI48 645 aaKnown RBP9.41□□□□□ -0.9
USP16-206ENST00000485067 FAM183BPQ6ZVS7 135 aa9.41□□□□□ -0.9
USP16-206ENST00000485067 STK32CQ86UX6 486 aa9.41□□□□□ -0.9
USP16-206ENST00000485067 UNC93AQ86WB7 457 aa9.41□□□□□ -0.9
USP16-206ENST00000485067 UNC45BQ8IWX7 931 aa9.41□□□□□ -0.9
USP16-206ENST00000485067 STKLD1Q8NE28 680 aa9.41□□□□□ -0.9
USP16-206ENST00000485067 UBA3Q8TBC4 463 aa9.41□□□□□ -0.9
USP16-206ENST00000485067 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.41□□□□□ -0.9
USP16-206ENST00000485067 RXFP2Q8WXD0 754 aa9.41□□□□□ -0.9
USP16-206ENST00000485067 TRMT2BQ96GJ1 504 aaKnown RBP9.41□□□□□ -0.9
USP16-206ENST00000485067 METTL2AQ96IZ6 378 aaKnown RBP9.41□□□□□ -0.9
USP16-206ENST00000485067 TSNARE1Q96NA8 513 aa9.41□□□□□ -0.9
USP16-206ENST00000485067 RNF157Q96PX1 679 aa9.41□□□□□ -0.9
USP16-206ENST00000485067 GAL3ST1Q99999 423 aa9.41□□□□□ -0.9
USP16-206ENST00000485067 CYP4F12Q9HCS2 524 aa9.41□□□□□ -0.9
USP16-206ENST00000485067 MLXIPLQ9NP71 852 aa9.41□□□□□ -0.9
USP16-206ENST00000485067 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.41□□□□□ -0.9
USP16-206ENST00000485067 FNIP2Q9P278 1114 aa9.41□□□□□ -0.9
USP16-206ENST00000485067 DNMT3AQ9Y6K1 912 aaPredicted RBP9.41□□□□□ -0.9
USP16-206ENST00000485067 PDCD11Q14690 1871 aaKnown RBP9.41□□□□□ -0.9
USP16-206ENST00000485067 RRN3P2A6NIE6 340 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 E5RJQ4 531 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 TM9SF1O15321 606 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 TYROBPO43914 113 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 DAB1O75553 588 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 UBOX5O94941 541 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 CELF2O95319 508 aaKnown RBP9.4□□□□□ -0.9
USP16-206ENST00000485067 FYNP06241 537 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 ATP5BP06576 529 aaKnown RBP9.4□□□□□ -0.9
USP16-206ENST00000485067 ABCB1P08183 1280 aaPredicted RBP9.4□□□□□ -0.9
USP16-206ENST00000485067 M6PRP20645 277 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 CA4P22748 312 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 IFNA8P32881 189 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 MSH2P43246 934 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 CCNG1P51959 295 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 ALDH18A1P54886 795 aaKnown RBP9.4□□□□□ -0.9
USP16-206ENST00000485067 HPCAP84074 193 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 LSAMPQ13449 338 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 KRT81Q14533 505 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 GRIK4Q16099 956 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 TAF12Q16514 161 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 CMPK2Q5EBM0 449 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 ANKRD22Q5VYY1 191 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 MAMDC2Q7Z304 686 aaPredicted RBP9.4□□□□□ -0.9
USP16-206ENST00000485067 DPP9Q86TI2 863 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 ANKMY2Q8IV38 441 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 LRRC52Q8N7C0 313 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 FAM71DQ8N9W8 422 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms