RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 DMXL2Q8TDJ6 3036 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 A0A1B0GTQ1 180 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 GOLGA6L7A0A1B0GV03 622 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 A0A1B0GVM2 712 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 SSU72P8A0A1W2PR75 194 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 TCAF2A6NFQ2 919 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 DDX3XO00571 662 aaKnown RBP eCLIP10.27□□□□□ -0.77
CPSF4-213ENST00000484112 VILLO15195 856 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 DFNA5O60443 496 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 TBL1XO60907 577 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 LUC7L3O95232 432 aaKnown RBP10.27□□□□□ -0.77
CPSF4-213ENST00000484112 MOCS2O96007 188 aaPredicted RBP10.27□□□□□ -0.77
CPSF4-213ENST00000484112 IGHV4-34P06331 123 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 DLDP09622 509 aaKnown RBP10.27□□□□□ -0.77
CPSF4-213ENST00000484112 GPD1P21695 349 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 CD70P32970 193 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 HNF1BP35680 557 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 SGSHP51688 502 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 ZNF143P52747 638 aaPredicted RBP10.27□□□□□ -0.77
CPSF4-213ENST00000484112 ST8SIA6P61647 398 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 RACK1P63244 317 aaKnown RBP10.27□□□□□ -0.77
CPSF4-213ENST00000484112 PITX1P78337 314 aaPredicted RBP10.27□□□□□ -0.77
CPSF4-213ENST00000484112 NRG1Q02297 640 aaPredicted RBP10.27□□□□□ -0.77
CPSF4-213ENST00000484112 CDH18Q13634 790 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 TDRD12Q587J7 1177 aaKnown RBP10.27□□□□□ -0.77
CPSF4-213ENST00000484112 OTUD1Q5VV17 481 aaPredicted RBP10.27□□□□□ -0.77
CPSF4-213ENST00000484112 E4F1Q66K89 784 aaPredicted RBP10.27□□□□□ -0.77
CPSF4-213ENST00000484112 PLEKHA7Q6IQ23 1121 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 RFWD3Q6PCD5 774 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 DCUN1D2Q6PH85 259 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 CHSY1Q86X52 802 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 MFN1Q8IWA4 741 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 EID2Q8N6I1 236 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 KDM1BQ8NB78 822 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 RXFP2Q8WXD0 754 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 NTAN1Q96AB6 310 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 SKA1Q96BD8 255 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 NXPE2Q96DL1 559 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 MRFAP1L1Q96HT8 127 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 PRICKLE1Q96MT3 831 aaPredicted RBP10.27□□□□□ -0.77
CPSF4-213ENST00000484112 TBCBQ99426 244 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 ELF4Q99607 663 aaPredicted RBP10.27□□□□□ -0.77
CPSF4-213ENST00000484112 ORAI3Q9BRQ5 295 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 TKTL2Q9H0I9 626 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 PABPC3Q9H361 631 aaKnown RBP10.27□□□□□ -0.77
CPSF4-213ENST00000484112 FBRSQ9HAH7 460 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 FBXL12Q9NXK8 326 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 LCMT1Q9UIC8 334 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 RAI2Q9Y5P3 530 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 GOLGA4Q13439 2230 aaKnown RBP10.27□□□□□ -0.77
CPSF4-213ENST00000484112 APC2O95996 2303 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 ACACAQ13085 2346 aa10.27□□□□□ -0.77
CPSF4-213ENST00000484112 CKAP5Q14008 2032 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 TMEM131Q92545 1883 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 SYNJ2BP-COX16A0A087WUM0 186 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 CXorf51AA0A1B0GTR3 108 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 A0A1W2PP55 124 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 A0A1W2PPC4 97 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 EIF3CLB5ME19 914 aaKnown RBP10.26□□□□□ -0.77
CPSF4-213ENST00000484112 E9PAM4 449 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 RRP8O43159 456 aaKnown RBP10.26□□□□□ -0.77
CPSF4-213ENST00000484112 TLX3O43711 291 aaPredicted RBP10.26□□□□□ -0.77
CPSF4-213ENST00000484112 RNASEH1O60930 286 aaKnown RBP10.26□□□□□ -0.77
CPSF4-213ENST00000484112 SIN3BO75182 1162 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 PAGE1O75459 146 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 CLDN11O75508 207 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 RFPL3O75679 317 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 RNASEH2AO75792 299 aaKnown RBP10.26□□□□□ -0.77
CPSF4-213ENST00000484112 MOCS3O95396 460 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 FTLP02792 175 aaPredicted RBP10.26□□□□□ -0.77
CPSF4-213ENST00000484112 ASLP04424 464 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 WNT1P04628 370 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 RRM1P23921 792 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 RFC1P35251 1148 aaPredicted RBP10.26□□□□□ -0.77
CPSF4-213ENST00000484112 EIF2S3P41091 472 aaKnown RBP10.26□□□□□ -0.77
CPSF4-213ENST00000484112 GALCP54803 685 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 TARDBPQ13148 414 aaKnown RBP eCLIP10.26□□□□□ -0.77
CPSF4-213ENST00000484112 MAPK8IP2Q13387 824 aaPredicted RBP10.26□□□□□ -0.77
CPSF4-213ENST00000484112 MAMLD1Q13495 774 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 AUHQ13825 339 aaKnown RBP10.26□□□□□ -0.77
CPSF4-213ENST00000484112 CCDC14Q49A88 953 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 C2CD6Q53TS8 623 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 RAP1GAP2Q684P5 730 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 NCEH1Q6PIU2 408 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 WDR59Q6PJI9 974 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 LRRC31Q6UY01 552 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 LGI2Q8N0V4 545 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 WFDC5Q8TCV5 224 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 CPLX3Q8WVH0 158 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 COL26A1Q96A83 441 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 TTC17Q96AE7 1141 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 CFAP57Q96MR6 1250 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 EIF3CQ99613 913 aaKnown RBP10.26□□□□□ -0.77
CPSF4-213ENST00000484112 OMDQ99983 421 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 CNPY3Q9BT09 278 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 TRIM5Q9C035 493 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 OSBPL2Q9H1P3 480 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 NEUROG2Q9H2A3 272 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 EBF2Q9HAK2 575 aa10.26□□□□□ -0.77
CPSF4-213ENST00000484112 COX16Q9P0S2 106 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms