RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 PMM2O15305 246 aa13.22□□□□□ -0.29
UBR4-213ENST00000483922 BNIP3LO60238 219 aa13.22□□□□□ -0.29
UBR4-213ENST00000483922 SNAP91O60641 907 aa13.22□□□□□ -0.29
UBR4-213ENST00000483922 ZNF821O75541 412 aaPredicted RBP13.22□□□□□ -0.29
UBR4-213ENST00000483922 CNTN5O94779 1100 aa13.22□□□□□ -0.29
UBR4-213ENST00000483922 CENPBP07199 599 aaPredicted RBP13.22□□□□□ -0.29
UBR4-213ENST00000483922 GP1BAP07359 652 aa13.22□□□□□ -0.29
UBR4-213ENST00000483922 YWHAZP63104 245 aaKnown RBP13.22□□□□□ -0.29
UBR4-213ENST00000483922 FKBP3Q00688 224 aaKnown RBP13.22□□□□□ -0.29
UBR4-213ENST00000483922 AUHQ13825 339 aaKnown RBP13.22□□□□□ -0.29
UBR4-213ENST00000483922 FZD2Q14332 565 aa13.22□□□□□ -0.29
UBR4-213ENST00000483922 DRAP1Q14919 205 aaPredicted RBP13.22□□□□□ -0.29
UBR4-213ENST00000483922 C5orf22Q49AR2 442 aa13.22□□□□□ -0.29
UBR4-213ENST00000483922 TMEM259Q4ZIN3 620 aa13.22□□□□□ -0.29
UBR4-213ENST00000483922 COBLL1Q53SF7 1204 aa13.22□□□□□ -0.29
UBR4-213ENST00000483922 FAM46CQ5VWP2 391 aa13.22□□□□□ -0.29
UBR4-213ENST00000483922 OR6B2Q6IFH4 312 aa13.22□□□□□ -0.29
UBR4-213ENST00000483922 NEK5Q6P3R8 708 aa13.22□□□□□ -0.29
UBR4-213ENST00000483922 INO80CQ6PI98 192 aaPredicted RBP13.22□□□□□ -0.29
UBR4-213ENST00000483922 IGF2-ASQ6U949 168 aa13.22□□□□□ -0.29
UBR4-213ENST00000483922 Q6ZSR6 202 aa13.22□□□□□ -0.29
UBR4-213ENST00000483922 HORMAD1Q86X24 394 aa13.22□□□□□ -0.29
UBR4-213ENST00000483922 CCDC117Q8IWD4 279 aaPredicted RBP13.22□□□□□ -0.29
UBR4-213ENST00000483922 IFI44Q8TCB0 444 aa13.22□□□□□ -0.29
UBR4-213ENST00000483922 VOPP1Q96AW1 172 aa13.22□□□□□ -0.29
UBR4-213ENST00000483922 ATXN7L3BQ96GX2 97 aa13.22□□□□□ -0.29
UBR4-213ENST00000483922 NT5C1BQ96P26 610 aa13.22□□□□□ -0.29
UBR4-213ENST00000483922 DEPDC7Q96QD5 511 aa13.22□□□□□ -0.29
UBR4-213ENST00000483922 CALN1Q9BXU9 219 aa13.22□□□□□ -0.29
UBR4-213ENST00000483922 POPDC2Q9HBU9 364 aa13.22□□□□□ -0.29
UBR4-213ENST00000483922 METTL14Q9HCE5 456 aaKnown RBP13.22□□□□□ -0.29
UBR4-213ENST00000483922 NLGN3Q9NZ94 848 aa13.22□□□□□ -0.29
UBR4-213ENST00000483922 CDRT15L2A8MXV6 281 aa13.21□□□□□ -0.29
UBR4-213ENST00000483922 SPINT1O43278 529 aa13.21□□□□□ -0.29
UBR4-213ENST00000483922 WISP1O95388 367 aa13.21□□□□□ -0.29
UBR4-213ENST00000483922 APOEP02649 317 aa13.21□□□□□ -0.29
UBR4-213ENST00000483922 CHRNA3P32297 505 aa13.21□□□□□ -0.29
UBR4-213ENST00000483922 PDX1P52945 283 aa13.21□□□□□ -0.29
UBR4-213ENST00000483922 UCNP55089 124 aa13.21□□□□□ -0.29
UBR4-213ENST00000483922 NUCB2P80303 420 aa13.21□□□□□ -0.29
UBR4-213ENST00000483922 STILQ15468 1287 aa13.21□□□□□ -0.29
UBR4-213ENST00000483922 C3orf38Q5JPI3 329 aa13.21□□□□□ -0.29
UBR4-213ENST00000483922 PERM1Q5SV97 790 aa13.21□□□□□ -0.29
UBR4-213ENST00000483922 BROXQ5VW32 411 aa13.21□□□□□ -0.29
UBR4-213ENST00000483922 GUSBP11Q6P575 273 aa13.21□□□□□ -0.29
UBR4-213ENST00000483922 DSG4Q86SJ6 1040 aa13.21□□□□□ -0.29
UBR4-213ENST00000483922 ZNF683Q8IZ20 524 aa13.21□□□□□ -0.29
UBR4-213ENST00000483922 DEFB106AQ8N104 65 aa13.21□□□□□ -0.29
UBR4-213ENST00000483922 ATP6V0D2Q8N8Y2 350 aa13.21□□□□□ -0.29
UBR4-213ENST00000483922 EHBP1Q8NDI1 1231 aa13.21□□□□□ -0.29
UBR4-213ENST00000483922 STK32AQ8WU08 396 aa13.21□□□□□ -0.29
UBR4-213ENST00000483922 MED8Q96G25 268 aa13.21□□□□□ -0.29
UBR4-213ENST00000483922 CLMPQ9H6B4 373 aa13.21□□□□□ -0.29
UBR4-213ENST00000483922 VANGL2Q9ULK5 521 aa13.21□□□□□ -0.29
UBR4-213ENST00000483922 HS3ST2Q9Y278 367 aa13.21□□□□□ -0.29
UBR4-213ENST00000483922 TBC1D30Q9Y2I9 924 aa13.21□□□□□ -0.29
UBR4-213ENST00000483922 HS3ST4Q9Y661 456 aa13.21□□□□□ -0.29
UBR4-213ENST00000483922 RELNP78509 3460 aa13.21□□□□□ -0.3
UBR4-213ENST00000483922 SYNJ2BP-COX16A0A087WUM0 186 aa13.2□□□□□ -0.3
UBR4-213ENST00000483922 A0A1W2PQ27 194 aa13.2□□□□□ -0.3
UBR4-213ENST00000483922 A0A1W2PQ64 194 aa13.2□□□□□ -0.3
UBR4-213ENST00000483922 C1QTNF3-AMACRE9PGA6 284 aa13.2□□□□□ -0.3
UBR4-213ENST00000483922 PAK4O96013 591 aaPredicted RBP13.2□□□□□ -0.3
UBR4-213ENST00000483922 CD44P16070 742 aaKnown RBP13.2□□□□□ -0.3
UBR4-213ENST00000483922 ZNF18P17022 549 aa13.2□□□□□ -0.3
UBR4-213ENST00000483922 HNRNPA2B1P22626 353 aaKnown RBP13.2□□□□□ -0.3
UBR4-213ENST00000483922 RRM1P23921 792 aa13.2□□□□□ -0.3
UBR4-213ENST00000483922 KCNC4Q03721 635 aa13.2□□□□□ -0.3
UBR4-213ENST00000483922 CLN3Q13286 438 aa13.2□□□□□ -0.3
UBR4-213ENST00000483922 CDKN3Q16667 212 aa13.2□□□□□ -0.3
UBR4-213ENST00000483922 LINC00303Q3SY05 128 aa13.2□□□□□ -0.3
UBR4-213ENST00000483922 ALFQ53S48 1182 aa13.2□□□□□ -0.3
UBR4-213ENST00000483922 ARSIQ5FYB1 569 aa13.2□□□□□ -0.3
UBR4-213ENST00000483922 ZNF658Q5TYW1 1059 aaPredicted RBP13.2□□□□□ -0.3
UBR4-213ENST00000483922 OTUD1Q5VV17 481 aaPredicted RBP13.2□□□□□ -0.3
UBR4-213ENST00000483922 CRTC1Q6UUV9 634 aa13.2□□□□□ -0.3
UBR4-213ENST00000483922 ZNF548Q8NEK5 533 aaPredicted RBP13.2□□□□□ -0.3
UBR4-213ENST00000483922 TMIEQ8NEW7 156 aa13.2□□□□□ -0.3
UBR4-213ENST00000483922 SPATA20Q8TB22 786 aa13.2□□□□□ -0.3
UBR4-213ENST00000483922 MAPK15Q8TD08 544 aa13.2□□□□□ -0.3
UBR4-213ENST00000483922 ZNF606Q8WXB4 792 aa13.2□□□□□ -0.3
UBR4-213ENST00000483922 IFT43Q96FT9 208 aa13.2□□□□□ -0.3
UBR4-213ENST00000483922 RPRD1AQ96P16 312 aaPredicted RBP13.2□□□□□ -0.3
UBR4-213ENST00000483922 SLC2A13Q96QE2 648 aa13.2□□□□□ -0.3
UBR4-213ENST00000483922 KLF6Q99612 283 aaPredicted RBP13.2□□□□□ -0.3
UBR4-213ENST00000483922 TCEAL2Q9H3H9 227 aaPredicted RBP13.2□□□□□ -0.3
UBR4-213ENST00000483922 THAP9Q9H5L6 903 aa13.2□□□□□ -0.3
UBR4-213ENST00000483922 DNAJC28Q9NX36 388 aa13.2□□□□□ -0.3
UBR4-213ENST00000483922 COX16Q9P0S2 106 aa13.2□□□□□ -0.3
UBR4-213ENST00000483922 SLC25A13Q9UJS0 675 aa13.2□□□□□ -0.3
UBR4-213ENST00000483922 SNX10Q9Y5X0 201 aa13.2□□□□□ -0.3
UBR4-213ENST00000483922 HS3ST3A1Q9Y663 406 aa13.2□□□□□ -0.3
UBR4-213ENST00000483922 FLNCQ14315 2725 aa13.2□□□□□ -0.3
UBR4-213ENST00000483922 A0A0D9SEW6 157 aa13.19□□□□□ -0.3
UBR4-213ENST00000483922 SPTY2D1-AS1A0A0U1RR47 76 aa13.19□□□□□ -0.3
UBR4-213ENST00000483922 CPED1A4D0V7 1026 aa13.19□□□□□ -0.3
UBR4-213ENST00000483922 KPNA3O00505 521 aaPredicted RBP13.19□□□□□ -0.3
UBR4-213ENST00000483922 ARHGAP6O43182 974 aa13.19□□□□□ -0.3
UBR4-213ENST00000483922 GRAP2O75791 330 aa13.19□□□□□ -0.3
UBR4-213ENST00000483922 CSF2P04141 144 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms