RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 RING1Q06587 406 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 NIPAL4Q0D2K0 466 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 ZKSCAN8Q15776 578 aaPredicted RBP9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 SNX30Q5VWJ9 437 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 NUGGCQ68CJ6 796 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 CYS1Q717R9 158 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 PIGWQ7Z7B1 504 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 TMEM135Q86UB9 458 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 KLHDC8BQ8IXV7 354 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 SGSM3Q96HU1 749 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 RPRD1AQ96P16 312 aaPredicted RBP9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 SLC22A12Q96S37 553 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 CYP2S1Q96SQ9 504 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 YME1L1Q96TA2 773 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 ELAC2Q9BQ52 826 aaKnown RBP9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 ATXN3LQ9H3M9 355 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 SLCO1B3Q9NPD5 702 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 CXXC1Q9P0U4 656 aaPredicted RBP9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 YIPF1Q9Y548 306 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 ACTL7AQ9Y615 435 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 A0A0D9SEW6 157 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 IQANK1A0A1B0GTG1 560 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 GOLGA8TH3BQL2 631 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 NRG2O14511 850 aaPredicted RBP9□□□□□ -0.97
CDC42SE1-204ENST00000483763 TEX28O15482 410 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 EFCAB14O75071 495 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 FGBP02675 491 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 MT-ND3P03897 115 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 PGAM1P18669 254 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 ATP5C1P36542 298 aaKnown RBP9□□□□□ -0.97
CDC42SE1-204ENST00000483763 ACVRL1P37023 503 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 SGSHP51688 502 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 ZXDBP98169 803 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 SATB1Q01826 763 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 ITPRIPL1Q6GPH6 555 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 DENND5AQ6IQ26 1287 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 CGB2Q6NT52 195 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 LVRNQ6Q4G3 990 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 C6orf89Q6UWU4 347 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 DNAJB7Q7Z6W7 309 aaPredicted RBP9□□□□□ -0.97
CDC42SE1-204ENST00000483763 ATP6V0D2Q8N8Y2 350 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 TTC17Q96AE7 1141 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 MYRFLQ96LU7 910 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 FCRL5Q96RD9 977 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 TGS1Q96RS0 853 aaKnown RBP9□□□□□ -0.97
CDC42SE1-204ENST00000483763 AGAP2Q99490 1192 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 GLOD4Q9HC38 313 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 COMMD8Q9NX08 183 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 SPG21Q9NZD8 308 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 DNMT3LQ9UJW3 386 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 ZNF180Q9UJW8 692 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 SMG5Q9UPR3 1016 aaKnown RBP9□□□□□ -0.97
CDC42SE1-204ENST00000483763 WDR91A4D1P6 747 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 PMPCBO75439 489 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 GSTA2P09210 222 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 OR1E1P30953 314 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 GMPRP36959 345 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 ETV4P43268 484 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 CHRNA4P43681 627 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 RPS24P62847 133 aaKnown RBP9□□□□□ -0.97
CDC42SE1-204ENST00000483763 COG7P83436 770 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 SLC18A2Q05940 514 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 TWF1Q12792 350 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 DNAJC3Q13217 504 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 PLD1Q13393 1074 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 RAB33AQ14088 237 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 SPRED3Q2MJR0 410 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 GKAP1Q5VSY0 366 aaPredicted RBP9□□□□□ -0.97
CDC42SE1-204ENST00000483763 TTC39BQ5VTQ0 682 aaPredicted RBP9□□□□□ -0.97
CDC42SE1-204ENST00000483763 DDX53Q86TM3 631 aaKnown RBP9□□□□□ -0.97
CDC42SE1-204ENST00000483763 CHSY1Q86X52 802 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 DENND1CQ8IV53 801 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 IPMKQ8NFU5 416 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 PTPRN2Q92932 1015 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 PABPC5Q96DU9 382 aaKnown RBP9□□□□□ -0.97
CDC42SE1-204ENST00000483763 MAGEB18Q96M61 343 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 LBHD1Q9BQE6 289 aaPredicted RBP9□□□□□ -0.97
CDC42SE1-204ENST00000483763 ALG13Q9NP73 1137 aaKnown RBP9□□□□□ -0.97
CDC42SE1-204ENST00000483763 FAM169AQ9Y6X4 670 aa9□□□□□ -0.97
CDC42SE1-204ENST00000483763 ERI2A8K979 691 aaKnown RBP8.99□□□□□ -0.97
CDC42SE1-204ENST00000483763 LILRB3O75022 631 aa8.99□□□□□ -0.97
CDC42SE1-204ENST00000483763 BAIAP3O94812 1187 aa8.99□□□□□ -0.97
CDC42SE1-204ENST00000483763 CSPG5O95196 566 aa8.99□□□□□ -0.97
CDC42SE1-204ENST00000483763 POLBP06746 335 aa8.99□□□□□ -0.97
CDC42SE1-204ENST00000483763 SNRPAP09012 282 aaKnown RBP8.99□□□□□ -0.97
CDC42SE1-204ENST00000483763 TACR2P21452 398 aa8.99□□□□□ -0.97
CDC42SE1-204ENST00000483763 NMBRP28336 390 aa8.99□□□□□ -0.97
CDC42SE1-204ENST00000483763 ADRA1AP35348 466 aa8.99□□□□□ -0.97
CDC42SE1-204ENST00000483763 NEK3P51956 506 aa8.99□□□□□ -0.97
CDC42SE1-204ENST00000483763 NDST2P52849 883 aa8.99□□□□□ -0.97
CDC42SE1-204ENST00000483763 FPGSQ05932 587 aa8.99□□□□□ -0.97
CDC42SE1-204ENST00000483763 IFT88Q13099 833 aa8.99□□□□□ -0.97
CDC42SE1-204ENST00000483763 PPIGQ13427 754 aaKnown RBP eCLIP8.99□□□□□ -0.97
CDC42SE1-204ENST00000483763 ANKRD20A4Q4UJ75 823 aa8.99□□□□□ -0.97
CDC42SE1-204ENST00000483763 HECTD3Q5T447 861 aa8.99□□□□□ -0.97
CDC42SE1-204ENST00000483763 TPGS2Q68CL5 300 aa8.99□□□□□ -0.97
CDC42SE1-204ENST00000483763 FAM47EQ6ZV65 393 aa8.99□□□□□ -0.97
CDC42SE1-204ENST00000483763 CMTR2Q8IYT2 770 aaKnown RBP8.99□□□□□ -0.97
CDC42SE1-204ENST00000483763 LGI2Q8N0V4 545 aa8.99□□□□□ -0.97
CDC42SE1-204ENST00000483763 PGBD5Q8N414 524 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms