RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 ZMIZ1Q9ULJ6 1067 aa20.33■□□□□ 0.85
HPS4-213ENST00000483631 DOCK9Q9BZ29 2069 aa20.33■□□□□ 0.84
HPS4-213ENST00000483631 KNTC1P50748 2209 aa20.33■□□□□ 0.84
HPS4-213ENST00000483631 PLXNB3Q9ULL4 1909 aa20.32■□□□□ 0.84
HPS4-213ENST00000483631 LGALS16A8MUM7 142 aa20.32■□□□□ 0.84
HPS4-213ENST00000483631 TNFSF14O43557 240 aa20.32■□□□□ 0.84
HPS4-213ENST00000483631 MAGEC1O60732 1142 aa20.32■□□□□ 0.84
HPS4-213ENST00000483631 WNT1P04628 370 aa20.32■□□□□ 0.84
HPS4-213ENST00000483631 UNGP13051 313 aaPredicted RBP20.32■□□□□ 0.84
HPS4-213ENST00000483631 SDC4P31431 198 aa20.32■□□□□ 0.84
HPS4-213ENST00000483631 PTPN9P43378 593 aa20.32■□□□□ 0.84
HPS4-213ENST00000483631 KLK7P49862 253 aa20.32■□□□□ 0.84
HPS4-213ENST00000483631 CNTN1Q12860 1018 aa20.32■□□□□ 0.84
HPS4-213ENST00000483631 RETSATQ6NUM9 610 aa20.32■□□□□ 0.84
HPS4-213ENST00000483631 LAYNQ6UX15 382 aa20.32■□□□□ 0.84
HPS4-213ENST00000483631 STRADAQ7RTN6 431 aa20.32■□□□□ 0.84
HPS4-213ENST00000483631 SLCO6A1Q86UG4 719 aa20.32■□□□□ 0.84
HPS4-213ENST00000483631 FAM131BQ86XD5 332 aa20.32■□□□□ 0.84
HPS4-213ENST00000483631 MFSD2AQ8NA29 543 aa20.32■□□□□ 0.84
HPS4-213ENST00000483631 OR2A12Q8NGT7 310 aa20.32■□□□□ 0.84
HPS4-213ENST00000483631 SERAC1Q96JX3 654 aa20.32■□□□□ 0.84
HPS4-213ENST00000483631 ERGIC2Q96RQ1 377 aa20.32■□□□□ 0.84
HPS4-213ENST00000483631 CEP44Q9C0F1 390 aa20.32■□□□□ 0.84
HPS4-213ENST00000483631 NLRC4Q9NPP4 1024 aa20.32■□□□□ 0.84
HPS4-213ENST00000483631 GDF3Q9NR23 364 aa20.32■□□□□ 0.84
HPS4-213ENST00000483631 MPP6Q9NZW5 540 aa20.32■□□□□ 0.84
HPS4-213ENST00000483631 CHD6Q8TD26 2715 aa20.31■□□□□ 0.84
HPS4-213ENST00000483631 FAM208BQ5VWN6 2430 aa20.31■□□□□ 0.84
HPS4-213ENST00000483631 A0A0D9SEW6 157 aa20.31■□□□□ 0.84
HPS4-213ENST00000483631 C2CD4BA6NLJ0 364 aa20.31■□□□□ 0.84
HPS4-213ENST00000483631 EPHB6O15197 1021 aa20.31■□□□□ 0.84
HPS4-213ENST00000483631 SNAP91O60641 907 aa20.31■□□□□ 0.84
HPS4-213ENST00000483631 RNGTTO60942 597 aaKnown RBP20.31■□□□□ 0.84
HPS4-213ENST00000483631 MBD3O95983 291 aa20.31■□□□□ 0.84
HPS4-213ENST00000483631 MT-CO1P00395 513 aa20.31■□□□□ 0.84
HPS4-213ENST00000483631 PRNPP04156 253 aa20.31■□□□□ 0.84
HPS4-213ENST00000483631 CHRNA3P32297 505 aa20.31■□□□□ 0.84
HPS4-213ENST00000483631 ETFBP38117 255 aa20.31■□□□□ 0.84
HPS4-213ENST00000483631 NUMBP49757 651 aa20.31■□□□□ 0.84
HPS4-213ENST00000483631 PPP2CBP62714 309 aa20.31■□□□□ 0.84
HPS4-213ENST00000483631 PPP2CAP67775 309 aa20.31■□□□□ 0.84
HPS4-213ENST00000483631 SYCP1Q15431 976 aa20.31■□□□□ 0.84
HPS4-213ENST00000483631 TFAP2DQ7Z6R9 452 aa20.31■□□□□ 0.84
HPS4-213ENST00000483631 NEK11Q8NG66 645 aa20.31■□□□□ 0.84
HPS4-213ENST00000483631 CENPIQ92674 756 aaPredicted RBP20.31■□□□□ 0.84
HPS4-213ENST00000483631 OSBPL2Q9H1P3 480 aa20.31■□□□□ 0.84
HPS4-213ENST00000483631 TOR4AQ9NXH8 423 aa20.31■□□□□ 0.84
HPS4-213ENST00000483631 ARHGAP20Q9P2F6 1191 aa20.31■□□□□ 0.84
HPS4-213ENST00000483631 SNX10Q9Y5X0 201 aa20.31■□□□□ 0.84
HPS4-213ENST00000483631 GOLGA4Q13439 2230 aaKnown RBP20.31■□□□□ 0.84
HPS4-213ENST00000483631 ZFHX4Q86UP3 3567 aa20.3■□□□□ 0.84
HPS4-213ENST00000483631 TLR4O00206 839 aa20.3■□□□□ 0.84
HPS4-213ENST00000483631 SRGAP2O75044 1071 aa20.3■□□□□ 0.84
HPS4-213ENST00000483631 RTN2O75298 545 aa20.3■□□□□ 0.84
HPS4-213ENST00000483631 CALB1P05937 261 aa20.3■□□□□ 0.84
HPS4-213ENST00000483631 ADRA1BP35368 520 aa20.3■□□□□ 0.84
HPS4-213ENST00000483631 NSFP46459 744 aaKnown RBP20.3■□□□□ 0.84
HPS4-213ENST00000483631 RXRGP48443 463 aa20.3■□□□□ 0.84
HPS4-213ENST00000483631 ARRB1P49407 418 aaPredicted RBP20.3■□□□□ 0.84
HPS4-213ENST00000483631 METAP1P53582 386 aa20.3■□□□□ 0.84
HPS4-213ENST00000483631 NXPH1P58417 271 aa20.3■□□□□ 0.84
HPS4-213ENST00000483631 CCDC14Q49A88 953 aa20.3■□□□□ 0.84
HPS4-213ENST00000483631 SETMARQ53H47 684 aaPredicted RBP20.3■□□□□ 0.84
HPS4-213ENST00000483631 MANEALQ5VSG8 457 aa20.3■□□□□ 0.84
HPS4-213ENST00000483631 C22orf39Q6P5X5 142 aa20.3■□□□□ 0.84
HPS4-213ENST00000483631 CCNI2Q6ZMN8 369 aaPredicted RBP20.3■□□□□ 0.84
HPS4-213ENST00000483631 PHF13Q86YI8 300 aaPredicted RBP20.3■□□□□ 0.84
HPS4-213ENST00000483631 EMC1Q8N766 993 aa20.3■□□□□ 0.84
HPS4-213ENST00000483631 RXFP2Q8WXD0 754 aa20.3■□□□□ 0.84
HPS4-213ENST00000483631 C11orf70Q9BRQ4 267 aa20.3■□□□□ 0.84
HPS4-213ENST00000483631 TMPRSS4Q9NRS4 437 aa20.3■□□□□ 0.84
HPS4-213ENST00000483631 BTBD3Q9Y2F9 522 aa20.3■□□□□ 0.84
HPS4-213ENST00000483631 ARID1BQ8NFD5 2236 aaPredicted RBP20.3■□□□□ 0.84
HPS4-213ENST00000483631 KCNK3O14649 394 aa20.29■□□□□ 0.84
HPS4-213ENST00000483631 ZMPSTE24O75844 475 aa20.29■□□□□ 0.84
HPS4-213ENST00000483631 CTSLP07711 333 aa20.29■□□□□ 0.84
HPS4-213ENST00000483631 RRM1P23921 792 aa20.29■□□□□ 0.84
HPS4-213ENST00000483631 RECQLP46063 649 aaPredicted RBP20.29■□□□□ 0.84
HPS4-213ENST00000483631 MAPKAPK2P49137 400 aa20.29■□□□□ 0.84
HPS4-213ENST00000483631 SERPINH1P50454 418 aaKnown RBP20.29■□□□□ 0.84
HPS4-213ENST00000483631 ATP11AP98196 1134 aa20.29■□□□□ 0.84
HPS4-213ENST00000483631 GNA12Q03113 381 aa20.29■□□□□ 0.84
HPS4-213ENST00000483631 PTP4A2Q12974 167 aa20.29■□□□□ 0.84
HPS4-213ENST00000483631 PIP5KL1Q5T9C9 394 aa20.29■□□□□ 0.84
HPS4-213ENST00000483631 TMPRSS7Q7RTY8 843 aa20.29■□□□□ 0.84
HPS4-213ENST00000483631 PLPP6Q8IY26 295 aa20.29■□□□□ 0.84
HPS4-213ENST00000483631 PCDH20Q8N6Y1 951 aaKnown RBP20.29■□□□□ 0.84
HPS4-213ENST00000483631 ZCCHC14Q8WYQ9 949 aaKnown RBP20.29■□□□□ 0.84
HPS4-213ENST00000483631 NTAN1Q96AB6 310 aa20.29■□□□□ 0.84
HPS4-213ENST00000483631 PPP1R16AQ96I34 528 aa20.29■□□□□ 0.84
HPS4-213ENST00000483631 HDAC8Q9BY41 377 aa20.29■□□□□ 0.84
HPS4-213ENST00000483631 DYRK4Q9NR20 520 aa20.29■□□□□ 0.84
HPS4-213ENST00000483631 ADAM22Q9P0K1 906 aa20.29■□□□□ 0.84
HPS4-213ENST00000483631 OR12D3Q9UGF7 316 aa20.29■□□□□ 0.84
HPS4-213ENST00000483631 TRPM6Q9BX84 2022 aa20.29■□□□□ 0.84
HPS4-213ENST00000483631 PRAMEF26H0Y7S4 382 aa20.28■□□□□ 0.84
HPS4-213ENST00000483631 SMAD6O43541 496 aaKnown RBP20.28■□□□□ 0.84
HPS4-213ENST00000483631 ATXN1LP0C7T5 689 aaKnown RBP20.28■□□□□ 0.84
HPS4-213ENST00000483631 CCDC172P0C7W6 258 aa20.28■□□□□ 0.84
HPS4-213ENST00000483631 CDK4P11802 303 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms