RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 LMO3Q8TAP4 145 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 STK32AQ8WU08 396 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 RNF34Q969K3 372 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 CCDC34Q96HJ3 373 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 KREMEN1Q96MU8 473 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 RPRD1AQ96P16 312 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-206ENST00000483030 NOX5Q96PH1 765 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 DEPDC7Q96QD5 511 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 MED15Q96RN5 788 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.58□□□□□ -1.2
CSDE1-206ENST00000483030 TRIM62Q9BVG3 475 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 SLC4A5Q9BY07 1137 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 THAP9Q9H5L6 903 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 FAM204AQ9H8W3 233 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 RMND1Q9NWS8 449 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 SLC25A13Q9UJS0 675 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 VPS28Q9UK41 221 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 VANGL2Q9ULK5 521 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 ZDHHC9Q9Y397 364 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 OR51B4Q9Y5P0 310 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 SHROOM3Q8TF72 1996 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 PLXNA2O75051 1894 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 CFAP46Q8IYW2 2715 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 LY6G6EA0A0G2JKS1 128 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 CPED1A4D0V7 1026 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 NEMP2A6NFY4 417 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 B8ZZF3 427 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 K7ERQ8 282 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 K7ESM1 405 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 RNF103O00237 685 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 SCAMP1O15126 338 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 PMM2O15305 246 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 NEBLO76041 1014 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 LETM1O95202 739 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-206ENST00000483030 PCDH8O95206 1070 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 GP1BAP07359 652 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 CTSLP07711 333 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 SLC2A3P11169 496 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 KRT10P13645 584 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 KRT5P13647 590 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 C6P13671 934 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 HNRNPA2B1P22626 353 aaKnown RBP7.57□□□□□ -1.2
CSDE1-206ENST00000483030 CCR1P32246 355 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 CHRNA3P32297 505 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 GGCXP38435 758 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 DUSP3P51452 185 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-206ENST00000483030 CDK17Q00537 523 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 GCNT1Q02742 428 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 LRRC63Q05C16 580 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 VAC14Q08AM6 782 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 CCDC15Q0P6D6 951 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 CETN1Q12798 172 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 ISXQ2M1V0 245 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 CCDC40Q4G0X9 1142 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 COBLL1Q53SF7 1204 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 TTC39BQ5VTQ0 682 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-206ENST00000483030 SEL1L3Q68CR1 1132 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 Q6ZSR6 202 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 ABI3BPQ7Z7G0 1075 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 C14orf80Q86SX3 495 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 DEFB106AQ8N104 65 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 SLC22A18ASQ8N1D0 253 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 SH2D3CQ8N5H7 860 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 FAM181AQ8N9Y4 354 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 ATP11CQ8NB49 1132 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 EHBP1Q8NDI1 1231 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 OR2A12Q8NGT7 310 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 IFI44Q8TCB0 444 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 MAPK15Q8TD08 544 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 ZNF606Q8WXB4 792 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 TTC9Q92623 222 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 ARRDC3Q96B67 414 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 VCPIP1Q96JH7 1222 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 BMFQ96LC9 184 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 GSDMAQ96QA5 445 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 DPH1Q9BZG8 443 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 SCAND2PQ9GZW5 306 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-206ENST00000483030 SIK2Q9H0K1 926 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 MUC3BQ9H195 1237 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 GDPD2Q9HCC8 539 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 ACP6Q9NPH0 428 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 ASCL3Q9NQ33 180 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 DYRK4Q9NR20 520 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 THSD1Q9NS62 852 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 DDIT4Q9NX09 232 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 DNAJC28Q9NX36 388 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 NLGN3Q9NZ94 848 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 ZFR2Q9UPR6 939 aaKnown RBP7.57□□□□□ -1.2
CSDE1-206ENST00000483030 CNTN6Q9UQ52 1028 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 U3KQA8 63 aa7.57□□□□□ -1.2
CSDE1-206ENST00000483030 A0A1W2PNU3 283 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-206ENST00000483030 POM121BA6NF01 834 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 P4HA2O15460 535 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 THAP12O43422 761 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 MED7O43513 233 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 SMAD6O43541 496 aaKnown RBP7.56□□□□□ -1.2
CSDE1-206ENST00000483030 SNAP91O60641 907 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 CLDN11O75508 207 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 GRAP2O75791 330 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 CNTN5O94779 1100 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms