RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 MKRN2Q9H000 416 aaKnown RBP10.84□□□□□ -0.67
SSBP1-210ENST00000481508 MUC3BQ9H195 1237 aa10.84□□□□□ -0.67
SSBP1-210ENST00000481508 PRSS16Q9NQE7 514 aa10.84□□□□□ -0.67
SSBP1-210ENST00000481508 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.84□□□□□ -0.67
SSBP1-210ENST00000481508 CWC15Q9P013 229 aaKnown RBP10.84□□□□□ -0.67
SSBP1-210ENST00000481508 EBF1Q9UH73 591 aa10.84□□□□□ -0.67
SSBP1-210ENST00000481508 VPS28Q9UK41 221 aa10.84□□□□□ -0.67
SSBP1-210ENST00000481508 INTUQ9ULD6 942 aa10.84□□□□□ -0.67
SSBP1-210ENST00000481508 SMG5Q9UPR3 1016 aaKnown RBP10.84□□□□□ -0.67
SSBP1-210ENST00000481508 PCDHGA2Q9Y5H1 932 aa10.84□□□□□ -0.67
SSBP1-210ENST00000481508 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.84□□□□□ -0.67
SSBP1-210ENST00000481508 EPN1Q9Y6I3 576 aaPredicted RBP10.84□□□□□ -0.67
SSBP1-210ENST00000481508 DOCK9Q9BZ29 2069 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 LAMA5O15230 3695 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 ILVBLA1L0T0 632 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 WASH4PA8MWX3 477 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 RNF103O00237 685 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 EEF2KO00418 725 aaKnown RBP10.83□□□□□ -0.68
SSBP1-210ENST00000481508 SMAD6O43541 496 aaKnown RBP10.83□□□□□ -0.68
SSBP1-210ENST00000481508 SIN3BO75182 1162 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 MOCS3O95396 460 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 ASLP04424 464 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 ATP5BP06576 529 aaKnown RBP10.83□□□□□ -0.68
SSBP1-210ENST00000481508 SRPRAP08240 638 aaKnown RBP10.83□□□□□ -0.68
SSBP1-210ENST00000481508 ERCC2P18074 760 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 TGM1P22735 817 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 CYLC1P35663 651 aaPredicted RBP10.83□□□□□ -0.68
SSBP1-210ENST00000481508 SSR1P43307 286 aaKnown RBP10.83□□□□□ -0.68
SSBP1-210ENST00000481508 MAPKAPK2P49137 400 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 TPI1P60174 286 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 LMNB2Q03252 620 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 CAMK2GQ13555 558 aaPredicted RBP10.83□□□□□ -0.68
SSBP1-210ENST00000481508 SLC12A1Q13621 1099 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 DPYSQ14117 519 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 TCEAL1Q15170 157 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 DPYSL2Q16555 572 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 LPAL2Q16609 132 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 C6orf118Q5T5N4 469 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 ACBD5Q5T8D3 534 aaPredicted RBP10.83□□□□□ -0.68
SSBP1-210ENST00000481508 LEKR1Q6ZMV7 388 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 RFX8Q6ZV50 586 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 CAMKK1Q8N5S9 505 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 FAM160A2Q8N612 972 aaPredicted RBP10.83□□□□□ -0.68
SSBP1-210ENST00000481508 ZNF557Q8N988 423 aaPredicted RBP10.83□□□□□ -0.68
SSBP1-210ENST00000481508 DCAF4L2Q8NA75 395 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 TSC1Q92574 1164 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 HMCESQ96FZ2 354 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 MRGPRX1Q96LB2 322 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 EPAS1Q99814 870 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 SPON2Q9BUD6 331 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 ACE2Q9BYF1 805 aaPredicted RBP10.83□□□□□ -0.68
SSBP1-210ENST00000481508 FAM126AQ9BYI3 521 aaPredicted RBP10.83□□□□□ -0.68
SSBP1-210ENST00000481508 LACRTQ9GZZ8 138 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 PCDH18Q9HCL0 1135 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 POLMQ9NP87 494 aaPredicted RBP10.83□□□□□ -0.68
SSBP1-210ENST00000481508 ETNK2Q9NVF9 386 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 TRIM10Q9UDY6 481 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 MBD1Q9UIS9 605 aaPredicted RBP10.83□□□□□ -0.68
SSBP1-210ENST00000481508 PLA2G4CQ9UP65 541 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 DUSP10Q9Y6W6 482 aa10.83□□□□□ -0.68
SSBP1-210ENST00000481508 GOLGA6L3A6NEY3 463 aa10.82□□□□□ -0.68
SSBP1-210ENST00000481508 NPC1O15118 1278 aa10.82□□□□□ -0.68
SSBP1-210ENST00000481508 BUB1BO60566 1050 aaPredicted RBP10.82□□□□□ -0.68
SSBP1-210ENST00000481508 SRCP12931 536 aa10.82□□□□□ -0.68
SSBP1-210ENST00000481508 DESP17661 470 aa10.82□□□□□ -0.68
SSBP1-210ENST00000481508 AMPD1P23109 780 aa10.82□□□□□ -0.68
SSBP1-210ENST00000481508 METAP1P53582 386 aa10.82□□□□□ -0.68
SSBP1-210ENST00000481508 OXCT1P55809 520 aa10.82□□□□□ -0.68
SSBP1-210ENST00000481508 MAP7D1Q3KQU3 841 aa10.82□□□□□ -0.68
SSBP1-210ENST00000481508 C9orf64Q5T6V5 341 aa10.82□□□□□ -0.68
SSBP1-210ENST00000481508 SDE2Q6IQ49 451 aa10.82□□□□□ -0.68
SSBP1-210ENST00000481508 KIAA1324Q6UXG2 1013 aaKnown RBP10.82□□□□□ -0.68
SSBP1-210ENST00000481508 ARHGAP36Q6ZRI8 547 aa10.82□□□□□ -0.68
SSBP1-210ENST00000481508 POLNQ7Z5Q5 900 aa10.82□□□□□ -0.68
SSBP1-210ENST00000481508 ARHGAP12Q8IWW6 846 aa10.82□□□□□ -0.68
SSBP1-210ENST00000481508 RHOT2Q8IXI1 618 aa10.82□□□□□ -0.68
SSBP1-210ENST00000481508 TEKT4Q8WW24 435 aa10.82□□□□□ -0.68
SSBP1-210ENST00000481508 GAB3Q8WWW8 586 aa10.82□□□□□ -0.68
SSBP1-210ENST00000481508 PTPRN2Q92932 1015 aa10.82□□□□□ -0.68
SSBP1-210ENST00000481508 CELF6Q96J87 481 aaKnown RBP10.82□□□□□ -0.68
SSBP1-210ENST00000481508 LRRC19Q9H756 370 aa10.82□□□□□ -0.68
SSBP1-210ENST00000481508 ATP13A1Q9HD20 1204 aa10.82□□□□□ -0.68
SSBP1-210ENST00000481508 BCCIPQ9P287 314 aaKnown RBP eCLIP10.82□□□□□ -0.68
SSBP1-210ENST00000481508 CCDC163A0A0D9SF12 145 aa10.81□□□□□ -0.68
SSBP1-210ENST00000481508 RASA4BC9J798 803 aa10.81□□□□□ -0.68
SSBP1-210ENST00000481508 CBX4O00257 560 aa10.81□□□□□ -0.68
SSBP1-210ENST00000481508 RASA4O43374 803 aa10.81□□□□□ -0.68
SSBP1-210ENST00000481508 BUB1O43683 1085 aa10.81□□□□□ -0.68
SSBP1-210ENST00000481508 ATP9BO43861 1147 aa10.81□□□□□ -0.68
SSBP1-210ENST00000481508 ZNF821O75541 412 aaPredicted RBP10.81□□□□□ -0.68
SSBP1-210ENST00000481508 RPP40O75818 363 aaKnown RBP10.81□□□□□ -0.68
SSBP1-210ENST00000481508 SDHBP21912 280 aa10.81□□□□□ -0.68
SSBP1-210ENST00000481508 COMTP21964 271 aa10.81□□□□□ -0.68
SSBP1-210ENST00000481508 IL4RP24394 825 aa10.81□□□□□ -0.68
SSBP1-210ENST00000481508 MAN1A1P33908 653 aa10.81□□□□□ -0.68
SSBP1-210ENST00000481508 P2RY2P41231 377 aa10.81□□□□□ -0.68
SSBP1-210ENST00000481508 MARCKSL1P49006 195 aa10.81□□□□□ -0.68
SSBP1-210ENST00000481508 NRLP54845 237 aa10.81□□□□□ -0.68
SSBP1-210ENST00000481508 CDH6P55285 790 aa10.81□□□□□ -0.68
SSBP1-210ENST00000481508 ST8SIA6P61647 398 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms