RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 SLC36A4Q6YBV0 504 aa6.8□□□□□ -1.32
LRCH3-216ENST00000481048 PAQR9Q6ZVX9 377 aa6.8□□□□□ -1.32
LRCH3-216ENST00000481048 SYT12Q8IV01 421 aa6.8□□□□□ -1.32
LRCH3-216ENST00000481048 ZNF276Q8N554 614 aa6.8□□□□□ -1.32
LRCH3-216ENST00000481048 MDGA1Q8NFP4 955 aa6.8□□□□□ -1.32
LRCH3-216ENST00000481048 CEP76Q8TAP6 659 aa6.8□□□□□ -1.32
LRCH3-216ENST00000481048 FNIP1Q8TF40 1166 aa6.8□□□□□ -1.32
LRCH3-216ENST00000481048 KCNK16Q96T55 309 aa6.8□□□□□ -1.32
LRCH3-216ENST00000481048 MED10Q9BTT4 135 aa6.8□□□□□ -1.32
LRCH3-216ENST00000481048 NT5C1AQ9BXI3 368 aa6.8□□□□□ -1.32
LRCH3-216ENST00000481048 NUSAP1Q9BXS6 441 aaKnown RBP6.8□□□□□ -1.32
LRCH3-216ENST00000481048 CEP295Q9C0D2 2601 aa6.8□□□□□ -1.32
LRCH3-216ENST00000481048 ZNF518BQ9C0D4 1074 aa6.8□□□□□ -1.32
LRCH3-216ENST00000481048 GZF1Q9H116 711 aaPredicted RBP6.8□□□□□ -1.32
LRCH3-216ENST00000481048 DPEP3Q9H4B8 488 aa6.8□□□□□ -1.32
LRCH3-216ENST00000481048 FAM124BQ9H5Z6 455 aaPredicted RBP6.8□□□□□ -1.32
LRCH3-216ENST00000481048 SLC39A2Q9NP94 309 aa6.8□□□□□ -1.32
LRCH3-216ENST00000481048 ARHGEF4Q9NR80 690 aa6.8□□□□□ -1.32
LRCH3-216ENST00000481048 TLR8Q9NR97 1041 aaKnown RBP6.8□□□□□ -1.32
LRCH3-216ENST00000481048 TMEM30AQ9NV96 361 aa6.8□□□□□ -1.32
LRCH3-216ENST00000481048 SMPD4Q9NXE4 827 aa6.8□□□□□ -1.32
LRCH3-216ENST00000481048 WDR35Q9P2L0 1181 aa6.8□□□□□ -1.32
LRCH3-216ENST00000481048 DEC1Q9P2X7 70 aa6.8□□□□□ -1.32
LRCH3-216ENST00000481048 CHORDC1Q9UHD1 332 aaPredicted RBP6.8□□□□□ -1.32
LRCH3-216ENST00000481048 RCOR1Q9UKL0 485 aa6.8□□□□□ -1.32
LRCH3-216ENST00000481048 PCDHA7Q9UN72 937 aa6.8□□□□□ -1.32
LRCH3-216ENST00000481048 PLA2G2DQ9UNK4 145 aa6.8□□□□□ -1.32
LRCH3-216ENST00000481048 FRMD4BQ9Y2L6 1034 aa6.8□□□□□ -1.32
LRCH3-216ENST00000481048 NUMA1Q14980 2115 aa6.8□□□□□ -1.32
LRCH3-216ENST00000481048 ASXL3Q9C0F0 2248 aa6.8□□□□□ -1.32
LRCH3-216ENST00000481048 CKAP5Q14008 2032 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 LRRIQ3A6PVS8 624 aaPredicted RBP6.79□□□□□ -1.32
LRCH3-216ENST00000481048 SGK1O00141 431 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 CDX4O14627 284 aaPredicted RBP6.79□□□□□ -1.32
LRCH3-216ENST00000481048 NPC1O15118 1278 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 AP5Z1O43299 807 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 KLRC4O43908 158 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 TLR5O60602 858 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 ZNF217O75362 1048 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 KRT37O76014 449 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 KLF8O95600 359 aaPredicted RBP6.79□□□□□ -1.32
LRCH3-216ENST00000481048 ASS1P00966 412 aaKnown RBP6.79□□□□□ -1.32
LRCH3-216ENST00000481048 PLA2G1BP04054 148 aaKnown RBP6.79□□□□□ -1.32
LRCH3-216ENST00000481048 NTSR1P30989 418 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 ATP5C1P36542 298 aaKnown RBP6.79□□□□□ -1.32
LRCH3-216ENST00000481048 ME1P48163 572 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 ZNF132P52740 706 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 CACNA2D1P54289 1103 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 CDH8P55286 799 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 IRX4P78413 519 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 PRR5P85299 388 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 CUL4BQ13620 913 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 NFIL3Q16649 462 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 VWA3BQ502W6 1294 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 SDE2Q6IQ49 451 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 CYP2R1Q6VVX0 501 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 TADA2BQ86TJ2 420 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 FUKQ8N0W3 1084 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 CCDC33Q8N5R6 958 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 ALLCQ8N6M5 410 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 ZNF513Q8N8E2 541 aaPredicted RBP6.79□□□□□ -1.32
LRCH3-216ENST00000481048 TERB1Q8NA31 727 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 TXNDC5Q8NBS9 432 aaKnown RBP6.79□□□□□ -1.32
LRCH3-216ENST00000481048 SCAMP5Q8TAC9 235 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 XPO6Q96QU8 1125 aaKnown RBP6.79□□□□□ -1.32
LRCH3-216ENST00000481048 CDK5RAP1Q96SZ6 601 aaKnown RBP6.79□□□□□ -1.32
LRCH3-216ENST00000481048 HNRNPABQ99729 332 aaKnown RBP6.79□□□□□ -1.32
LRCH3-216ENST00000481048 TPSD1Q9BZJ3 242 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 NACA2Q9H009 215 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 BLZF1Q9H2G9 400 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 KCTD10Q9H3F6 313 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 CYP3A43Q9HB55 503 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 EXOC1Q9NV70 894 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 SCML2Q9UQR0 700 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 TRAF3IP3Q9Y228 551 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 ZNF510Q9Y2H8 683 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 PMF1-BGLAPU3KQ54 211 aa6.79□□□□□ -1.32
LRCH3-216ENST00000481048 URB1O60287 2271 aaKnown RBP6.79□□□□□ -1.32
LRCH3-216ENST00000481048 LAMA1P25391 3075 aa6.78□□□□□ -1.32
LRCH3-216ENST00000481048 TMEM8BA6NDV4 472 aa6.78□□□□□ -1.32
LRCH3-216ENST00000481048 FGF10O15520 208 aaPredicted RBP6.78□□□□□ -1.32
LRCH3-216ENST00000481048 CALUO43852 315 aaPredicted RBP6.78□□□□□ -1.32
LRCH3-216ENST00000481048 CACNG3O60359 315 aa6.78□□□□□ -1.32
LRCH3-216ENST00000481048 TULP3O75386 442 aa6.78□□□□□ -1.32
LRCH3-216ENST00000481048 VNN1O95497 513 aa6.78□□□□□ -1.32
LRCH3-216ENST00000481048 NR3C1P04150 777 aa6.78□□□□□ -1.32
LRCH3-216ENST00000481048 PROS1P07225 676 aa6.78□□□□□ -1.32
LRCH3-216ENST00000481048 HSP90AA1P07900 732 aaKnown RBP6.78□□□□□ -1.32
LRCH3-216ENST00000481048 FAM200BP0CF97 657 aa6.78□□□□□ -1.32
LRCH3-216ENST00000481048 HNRNPLP14866 589 aaKnown RBP eCLIP6.78□□□□□ -1.322e-6■■■■□ 21
LRCH3-216ENST00000481048 CMA1P23946 247 aa6.78□□□□□ -1.32
LRCH3-216ENST00000481048 TACR1P25103 407 aa6.78□□□□□ -1.32
LRCH3-216ENST00000481048 GTF2H1P32780 548 aa6.78□□□□□ -1.32
LRCH3-216ENST00000481048 RDXP35241 583 aaKnown RBP6.78□□□□□ -1.32
LRCH3-216ENST00000481048 CHKAP35790 457 aa6.78□□□□□ -1.32
LRCH3-216ENST00000481048 NOP2P46087 812 aaKnown RBP6.78□□□□□ -1.32
LRCH3-216ENST00000481048 DHPSP49366 369 aaPredicted RBP6.78□□□□□ -1.32
LRCH3-216ENST00000481048 CASP4P49662 377 aa6.78□□□□□ -1.32
LRCH3-216ENST00000481048 NOVA1P51513 510 aaKnown RBP6.78□□□□□ -1.32
LRCH3-216ENST00000481048 NDST1P52848 882 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms