RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.93■□□□□ 0.46
UPF3A-206ENST00000480362 CBX4O00257 560 aa17.93■□□□□ 0.46
UPF3A-206ENST00000480362 ZBTB24O43167 697 aaPredicted RBP17.93■□□□□ 0.46
UPF3A-206ENST00000480362 HOXC11O43248 304 aaPredicted RBP17.93■□□□□ 0.46
UPF3A-206ENST00000480362 OPHN1O60890 802 aa17.93■□□□□ 0.46
UPF3A-206ENST00000480362 SEC31AO94979 1220 aaKnown RBP17.93■□□□□ 0.46
UPF3A-206ENST00000480362 METTL18O95568 372 aa17.93■□□□□ 0.46
UPF3A-206ENST00000480362 TNFRSF8P28908 595 aa17.93■□□□□ 0.46
UPF3A-206ENST00000480362 RENBPP51606 427 aa17.93■□□□□ 0.46
UPF3A-206ENST00000480362 PLK1P53350 603 aa17.93■□□□□ 0.46
UPF3A-206ENST00000480362 TNK2Q07912 1038 aa17.93■□□□□ 0.46
UPF3A-206ENST00000480362 SLC12A1Q13621 1099 aa17.93■□□□□ 0.46
UPF3A-206ENST00000480362 HNRNPDQ14103 355 aaKnown RBP17.93■□□□□ 0.46
UPF3A-206ENST00000480362 HLTFQ14527 1009 aaKnown RBP eCLIP17.93■□□□□ 0.46
UPF3A-206ENST00000480362 MARC1Q5VT66 337 aa17.93■□□□□ 0.46
UPF3A-206ENST00000480362 ASTLQ6HA08 431 aaPredicted RBP17.93■□□□□ 0.46
UPF3A-206ENST00000480362 CNTD1Q8N815 330 aa17.93■□□□□ 0.46
UPF3A-206ENST00000480362 ZNF557Q8N988 423 aaPredicted RBP17.93■□□□□ 0.46
UPF3A-206ENST00000480362 BBOF1Q8ND07 529 aa17.93■□□□□ 0.46
UPF3A-206ENST00000480362 TEKT5Q96M29 485 aa17.93■□□□□ 0.46
UPF3A-206ENST00000480362 TRMT61BQ9BVS5 477 aaKnown RBP17.93■□□□□ 0.46
UPF3A-206ENST00000480362 SLC2A11Q9BYW1 496 aa17.93■□□□□ 0.46
UPF3A-206ENST00000480362 RAB6BQ9NRW1 208 aa17.93■□□□□ 0.46
UPF3A-206ENST00000480362 ABCB8Q9NUT2 735 aa17.93■□□□□ 0.46
UPF3A-206ENST00000480362 ANAPC5Q9UJX4 755 aa17.93■□□□□ 0.46
UPF3A-206ENST00000480362 NFU1Q9UMS0 254 aa17.93■□□□□ 0.46
UPF3A-206ENST00000480362 NUMBLQ9Y6R0 609 aa17.93■□□□□ 0.46
UPF3A-206ENST00000480362 MYOFQ9NZM1 2061 aa17.93■□□□□ 0.46
UPF3A-206ENST00000480362 OTOL1A6NHN0 477 aaPredicted RBP17.92■□□□□ 0.46
UPF3A-206ENST00000480362 C2CD4DB7Z1M9 353 aa17.92■□□□□ 0.46
UPF3A-206ENST00000480362 ANHXE9PGG2 379 aa17.92■□□□□ 0.46
UPF3A-206ENST00000480362 CHADO15335 359 aa17.92■□□□□ 0.46
UPF3A-206ENST00000480362 SNAP91O60641 907 aa17.92■□□□□ 0.46
UPF3A-206ENST00000480362 ZMPSTE24O75844 475 aa17.92■□□□□ 0.46
UPF3A-206ENST00000480362 NEBLO76041 1014 aa17.92■□□□□ 0.46
UPF3A-206ENST00000480362 MYBL2P10244 700 aa17.92■□□□□ 0.46
UPF3A-206ENST00000480362 HLA-FP30511 346 aa17.92■□□□□ 0.46
UPF3A-206ENST00000480362 GDI1P31150 447 aa17.92■□□□□ 0.46
UPF3A-206ENST00000480362 ITGA8P53708 1063 aa17.92■□□□□ 0.46
UPF3A-206ENST00000480362 PLTPP55058 493 aa17.92■□□□□ 0.46
UPF3A-206ENST00000480362 BASP1P80723 227 aaKnown RBP17.92■□□□□ 0.46
UPF3A-206ENST00000480362 SLC10A7Q0GE19 358 aa17.92■□□□□ 0.46
UPF3A-206ENST00000480362 NR1H3Q13133 447 aa17.92■□□□□ 0.46
UPF3A-206ENST00000480362 HTR4Q13639 388 aa17.92■□□□□ 0.46
UPF3A-206ENST00000480362 LBRQ14739 615 aaKnown RBP17.92■□□□□ 0.46
UPF3A-206ENST00000480362 PLEKHG6Q3KR16 790 aa17.92■□□□□ 0.46
UPF3A-206ENST00000480362 FAXCQ5TGI0 409 aa17.92■□□□□ 0.46
UPF3A-206ENST00000480362 TMCO4Q5TGY1 634 aa17.92■□□□□ 0.46
UPF3A-206ENST00000480362 ZDHHC24Q6UX98 284 aa17.92■□□□□ 0.46
UPF3A-206ENST00000480362 GSPT2Q8IYD1 628 aaKnown RBP17.92■□□□□ 0.46
UPF3A-206ENST00000480362 DCAF4L2Q8NA75 395 aa17.92■□□□□ 0.46
UPF3A-206ENST00000480362 ART4Q93070 314 aa17.92■□□□□ 0.46
UPF3A-206ENST00000480362 ZNF599Q96NL3 588 aa17.92■□□□□ 0.46
UPF3A-206ENST00000480362 XPO6Q96QU8 1125 aaKnown RBP17.92■□□□□ 0.46
UPF3A-206ENST00000480362 NEUROG2Q9H2A3 272 aa17.92■□□□□ 0.46
UPF3A-206ENST00000480362 ETNK1Q9HBU6 452 aa17.92■□□□□ 0.46
UPF3A-206ENST00000480362 FBXO10Q9UK96 956 aa17.92■□□□□ 0.46
UPF3A-206ENST00000480362 INTS6Q9UL03 887 aaKnown RBP17.92■□□□□ 0.46
UPF3A-206ENST00000480362 ACTL7AQ9Y615 435 aa17.92■□□□□ 0.46
UPF3A-206ENST00000480362 KIF26AQ9ULI4 1882 aaPredicted RBP17.92■□□□□ 0.46
UPF3A-206ENST00000480362 F5H423 210 aaPredicted RBP17.91■□□□□ 0.46
UPF3A-206ENST00000480362 CACNG3O60359 315 aa17.91■□□□□ 0.46
UPF3A-206ENST00000480362 HLA-DQB2P05538 268 aa17.91■□□□□ 0.46
UPF3A-206ENST00000480362 PABPC1P11940 636 aaKnown RBP17.91■□□□□ 0.46
UPF3A-206ENST00000480362 CD68P34810 354 aaPredicted RBP17.91■□□□□ 0.46
UPF3A-206ENST00000480362 FDFT1P37268 417 aa17.91■□□□□ 0.46
UPF3A-206ENST00000480362 MMP13P45452 471 aa17.91■□□□□ 0.46
UPF3A-206ENST00000480362 ARF5P84085 180 aa17.91■□□□□ 0.46
UPF3A-206ENST00000480362 RUNX3Q13761 415 aa17.91■□□□□ 0.46
UPF3A-206ENST00000480362 PARP6Q2NL67 630 aa17.91■□□□□ 0.46
UPF3A-206ENST00000480362 RNASEH2BQ5TBB1 312 aaKnown RBP17.91■□□□□ 0.46
UPF3A-206ENST00000480362 ITPRIPL1Q6GPH6 555 aa17.91■□□□□ 0.46
UPF3A-206ENST00000480362 HIBCHQ6NVY1 386 aaPredicted RBP17.91■□□□□ 0.46
UPF3A-206ENST00000480362 PCGF5Q86SE9 256 aa17.91■□□□□ 0.46
UPF3A-206ENST00000480362 CPA6Q8N4T0 437 aa17.91■□□□□ 0.46
UPF3A-206ENST00000480362 TEX26Q8N6G2 289 aa17.91■□□□□ 0.46
UPF3A-206ENST00000480362 EIF1ADQ8N9N8 165 aaKnown RBP17.91■□□□□ 0.46
UPF3A-206ENST00000480362 TTC8Q8TAM2 541 aa17.91■□□□□ 0.46
UPF3A-206ENST00000480362 CPT1BQ92523 772 aa17.91■□□□□ 0.46
UPF3A-206ENST00000480362 C2orf49Q9BVC5 232 aaPredicted RBP17.91■□□□□ 0.46
UPF3A-206ENST00000480362 PHF7Q9BWX1 381 aaPredicted RBP17.91■□□□□ 0.46
UPF3A-206ENST00000480362 ZDHHC18Q9NUE0 388 aa17.91■□□□□ 0.46
UPF3A-206ENST00000480362 IGSF9Q9P2J2 1179 aa17.91■□□□□ 0.46
UPF3A-206ENST00000480362 UBA2Q9UBT2 640 aaPredicted RBP17.91■□□□□ 0.46
UPF3A-206ENST00000480362 RSPH14Q9UHP6 348 aa17.91■□□□□ 0.46
UPF3A-206ENST00000480362 VPS51Q9UID3 782 aa17.91■□□□□ 0.46
UPF3A-206ENST00000480362 GGA2Q9UJY4 613 aa17.91■□□□□ 0.46
UPF3A-206ENST00000480362 NDC80O14777 642 aa17.9■□□□□ 0.46
UPF3A-206ENST00000480362 TRIM24O15164 1050 aa17.9■□□□□ 0.46
UPF3A-206ENST00000480362 TP73O15350 636 aa17.9■□□□□ 0.46
UPF3A-206ENST00000480362 CISD3P0C7P0 127 aa17.9■□□□□ 0.46
UPF3A-206ENST00000480362 NFKB1P19838 968 aa17.9■□□□□ 0.46
UPF3A-206ENST00000480362 PSMB4P28070 264 aa17.9■□□□□ 0.46
UPF3A-206ENST00000480362 ECHS1P30084 290 aa17.9■□□□□ 0.46
UPF3A-206ENST00000480362 CAV1Q03135 178 aa17.9■□□□□ 0.46
UPF3A-206ENST00000480362 BRD3Q15059 726 aa17.9■□□□□ 0.46
UPF3A-206ENST00000480362 GAB4Q2WGN9 574 aa17.9■□□□□ 0.46
UPF3A-206ENST00000480362 LEXMQ3ZCV2 418 aa17.9■□□□□ 0.46
UPF3A-206ENST00000480362 PITRM1Q5JRX3 1037 aa17.9■□□□□ 0.46
UPF3A-206ENST00000480362 LINGO4Q6UY18 593 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms