RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 ALDH1A2O94788 518 aa27.37■■□□□ 1.97
CCM2-211ENST00000478582 HLA-EP13747 358 aa27.37■■□□□ 1.97
CCM2-211ENST00000478582 TGM1P22735 817 aa27.37■■□□□ 1.97
CCM2-211ENST00000478582 GLDCP23378 1020 aa27.37■■□□□ 1.97
CCM2-211ENST00000478582 NUMBP49757 651 aa27.37■■□□□ 1.97
CCM2-211ENST00000478582 MMRN1Q13201 1228 aa27.37■■□□□ 1.97
CCM2-211ENST00000478582 CAMK2GQ13555 558 aaPredicted RBP27.37■■□□□ 1.97
CCM2-211ENST00000478582 HNRNPA1L2Q32P51 320 aaKnown RBP27.37■■□□□ 1.97
CCM2-211ENST00000478582 ANKRD20A8PQ5CZ79 823 aa27.37■■□□□ 1.97
CCM2-211ENST00000478582 ZFYVE27Q5T4F4 411 aa27.37■■□□□ 1.97
CCM2-211ENST00000478582 RETSATQ6NUM9 610 aa27.37■■□□□ 1.97
CCM2-211ENST00000478582 SH2D3CQ8N5H7 860 aa27.37■■□□□ 1.97
CCM2-211ENST00000478582 KCNF1Q9H3M0 494 aa27.37■■□□□ 1.97
CCM2-211ENST00000478582 KLHL11Q9NVR0 708 aa27.37■■□□□ 1.97
CCM2-211ENST00000478582 HPCAL4Q9UM19 191 aa27.37■■□□□ 1.97
CCM2-211ENST00000478582 LRRD1A4D1F6 860 aa27.36■■□□□ 1.97
CCM2-211ENST00000478582 CBX4O00257 560 aa27.36■■□□□ 1.97
CCM2-211ENST00000478582 SYNCRIPO60506 623 aaKnown RBP27.36■■□□□ 1.97
CCM2-211ENST00000478582 C7P10643 843 aa27.36■■□□□ 1.97
CCM2-211ENST00000478582 ARF5P84085 180 aa27.36■■□□□ 1.97
CCM2-211ENST00000478582 SERINC3Q13530 473 aa27.36■■□□□ 1.97
CCM2-211ENST00000478582 ANO7Q6IWH7 933 aa27.36■■□□□ 1.97
CCM2-211ENST00000478582 TMCO3Q6UWJ1 677 aa27.36■■□□□ 1.97
CCM2-211ENST00000478582 ARHGAP12Q8IWW6 846 aa27.36■■□□□ 1.97
CCM2-211ENST00000478582 SYCE1Q8N0S2 351 aa27.36■■□□□ 1.97
CCM2-211ENST00000478582 NPWQ8N729 165 aa27.36■■□□□ 1.97
CCM2-211ENST00000478582 PCDH19Q8TAB3 1148 aa27.36■■□□□ 1.97
CCM2-211ENST00000478582 FRS2Q8WU20 508 aa27.36■■□□□ 1.97
CCM2-211ENST00000478582 HMCESQ96FZ2 354 aa27.36■■□□□ 1.97
CCM2-211ENST00000478582 LOXL4Q96JB6 756 aa27.36■■□□□ 1.97
CCM2-211ENST00000478582 ZC3H10Q96K80 434 aaKnown RBP27.36■■□□□ 1.97
CCM2-211ENST00000478582 SLC39A8Q9C0K1 460 aa27.36■■□□□ 1.97
CCM2-211ENST00000478582 ETNK2Q9NVF9 386 aa27.36■■□□□ 1.97
CCM2-211ENST00000478582 WDR87Q6ZQQ6 2873 aa27.36■■□□□ 1.97
CCM2-211ENST00000478582 SPAG17Q6Q759 2223 aa27.36■■□□□ 1.97
CCM2-211ENST00000478582 TCRBV21S2A2A0A5A6 115 aa27.35■■□□□ 1.97
CCM2-211ENST00000478582 TARSL2A2RTX5 802 aaKnown RBP27.35■■□□□ 1.97
CCM2-211ENST00000478582 ZSCAN5CA6NGD5 496 aaPredicted RBP27.35■■□□□ 1.97
CCM2-211ENST00000478582 TTC34A8MYJ7 566 aa27.35■■□□□ 1.97
CCM2-211ENST00000478582 LRP3O75074 770 aa27.35■■□□□ 1.97
CCM2-211ENST00000478582 MT-CO1P00395 513 aa27.35■■□□□ 1.97
CCM2-211ENST00000478582 SRCP12931 536 aa27.35■■□□□ 1.97
CCM2-211ENST00000478582 CLCN6P51797 869 aa27.35■■□□□ 1.97
CCM2-211ENST00000478582 CCDC173Q0VFZ6 552 aa27.35■■□□□ 1.97
CCM2-211ENST00000478582 KBTBD6Q86V97 674 aa27.35■■□□□ 1.97
CCM2-211ENST00000478582 KATNAL2Q8IYT4 538 aa27.35■■□□□ 1.97
CCM2-211ENST00000478582 MDGA1Q8NFP4 955 aa27.35■■□□□ 1.97
CCM2-211ENST00000478582 FBRSQ9HAH7 460 aa27.35■■□□□ 1.97
CCM2-211ENST00000478582 PRDM16Q9HAZ2 1276 aa27.35■■□□□ 1.97
CCM2-211ENST00000478582 PRSS16Q9NQE7 514 aa27.35■■□□□ 1.97
CCM2-211ENST00000478582 GUCA1BQ9UMX6 200 aa27.35■■□□□ 1.97
CCM2-211ENST00000478582 PPP2R2CQ9Y2T4 447 aa27.35■■□□□ 1.97
CCM2-211ENST00000478582 SBDSQ9Y3A5 250 aaKnown RBP eCLIP27.35■■□□□ 1.97
CCM2-211ENST00000478582 FRYLO94915 3013 aa27.34■■□□□ 1.97
CCM2-211ENST00000478582 EDDM13A0A1B0GTR0 161 aa27.34■■□□□ 1.97
CCM2-211ENST00000478582 ARHGAP42A6NI28 874 aa27.34■■□□□ 1.97
CCM2-211ENST00000478582 PALMO75781 387 aa27.34■■□□□ 1.97
CCM2-211ENST00000478582 CD160O95971 181 aa27.34■■□□□ 1.97
CCM2-211ENST00000478582 KRT1P04264 644 aa27.34■■□□□ 1.97
CCM2-211ENST00000478582 TNNT1P13805 278 aa27.34■■□□□ 1.97
CCM2-211ENST00000478582 CTNNA1P35221 906 aaKnown RBP27.34■■□□□ 1.97
CCM2-211ENST00000478582 SERPINB6P35237 376 aa27.34■■□□□ 1.97
CCM2-211ENST00000478582 GEMIN4P57678 1058 aaKnown RBP27.34■■□□□ 1.97
CCM2-211ENST00000478582 SPEM2Q0P670 501 aa27.34■■□□□ 1.97
CCM2-211ENST00000478582 USP39Q53GS9 565 aaKnown RBP27.34■■□□□ 1.97
CCM2-211ENST00000478582 NT5DC3Q86UY8 548 aa27.34■■□□□ 1.97
CCM2-211ENST00000478582 ZNF366Q8N895 744 aa27.34■■□□□ 1.97
CCM2-211ENST00000478582 UBE2Q2Q8WVN8 375 aa27.34■■□□□ 1.97
CCM2-211ENST00000478582 PTPRN2Q92932 1015 aa27.34■■□□□ 1.97
CCM2-211ENST00000478582 CELF6Q96J87 481 aaKnown RBP27.34■■□□□ 1.97
CCM2-211ENST00000478582 RNF157Q96PX1 679 aa27.34■■□□□ 1.97
CCM2-211ENST00000478582 TPSD1Q9BZJ3 242 aa27.34■■□□□ 1.97
CCM2-211ENST00000478582 PARD6AQ9NPB6 346 aa27.34■■□□□ 1.97
CCM2-211ENST00000478582 MFHAS1Q9Y4C4 1052 aa27.34■■□□□ 1.97
CCM2-211ENST00000478582 PCDHA3Q9Y5H8 950 aa27.34■■□□□ 1.97
CCM2-211ENST00000478582 ZBTB24O43167 697 aaPredicted RBP27.33■■□□□ 1.97
CCM2-211ENST00000478582 GABRG2P18507 467 aa27.33■■□□□ 1.97
CCM2-211ENST00000478582 CTNNA2P26232 953 aa27.33■■□□□ 1.97
CCM2-211ENST00000478582 SERPINH1P50454 418 aaKnown RBP27.33■■□□□ 1.97
CCM2-211ENST00000478582 PAFAH1B3Q15102 231 aaKnown RBP27.33■■□□□ 1.97
CCM2-211ENST00000478582 DLG2Q15700 870 aa27.33■■□□□ 1.97
CCM2-211ENST00000478582 TAZQ16635 292 aa27.33■■□□□ 1.97
CCM2-211ENST00000478582 PLK5Q496M5 336 aa27.33■■□□□ 1.97
CCM2-211ENST00000478582 C9orf64Q5T6V5 341 aa27.33■■□□□ 1.97
CCM2-211ENST00000478582 LINGO4Q6UY18 593 aa27.33■■□□□ 1.97
CCM2-211ENST00000478582 PQLC3Q8N755 202 aa27.33■■□□□ 1.97
CCM2-211ENST00000478582 ATP11CQ8NB49 1132 aa27.33■■□□□ 1.97
CCM2-211ENST00000478582 ZNF830Q96NB3 372 aaPredicted RBP27.33■■□□□ 1.97
CCM2-211ENST00000478582 CAPN6Q9Y6Q1 641 aa27.33■■□□□ 1.97
CCM2-211ENST00000478582 CCDC66A2RUB6 948 aa27.32■■□□□ 1.96
CCM2-211ENST00000478582 ZRANB2O95218 330 aaKnown RBP eCLIP27.32■■□□□ 1.96
CCM2-211ENST00000478582 PAPOLAP51003 745 aaKnown RBP27.32■■□□□ 1.96
CCM2-211ENST00000478582 COPAP53621 1224 aa27.32■■□□□ 1.96
CCM2-211ENST00000478582 ODF2Q5BJF6 829 aa27.32■■□□□ 1.96
CCM2-211ENST00000478582 NCBP2-AS2Q69YL0 99 aa27.32■■□□□ 1.96
CCM2-211ENST00000478582 RCOR2Q8IZ40 523 aa27.32■■□□□ 1.96
CCM2-211ENST00000478582 OR2T3Q8NH03 318 aa27.32■■□□□ 1.96
CCM2-211ENST00000478582 CASKIN2Q8WXE0 1202 aa27.32■■□□□ 1.96
CCM2-211ENST00000478582 KRT35Q92764 455 aa27.32■■□□□ 1.96
CCM2-211ENST00000478582 RNF25Q96BH1 459 aaPredicted RBP27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms