RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 A0A087X0B3 334 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 PRR19A6NJB7 356 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 CLIC2O15247 247 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 RAD51BO15315 384 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 YY2O15391 372 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 ACSL4O60488 711 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 LUC7L3O95232 432 aaKnown RBP7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 MOCS3O95396 460 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 DDAH2O95865 285 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 ASS1P00966 412 aaKnown RBP7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 LIFP15018 202 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 NOS2P35228 1153 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 NNMTP40261 264 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 SLC11A2P49281 568 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 CYP2J2P51589 502 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 ARSDP51689 593 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 TKTL1P51854 596 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 C1orf61Q13536 156 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 CDH18Q13634 790 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 FGL2Q14314 439 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 PRRT3Q5FWE3 981 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 RNF219Q5W0B1 726 aaPredicted RBP7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 BSPRYQ5W0U4 402 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 SEL1L3Q68CR1 1132 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 MCTP1Q6DN14 999 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 SPOPLQ6IQ16 392 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 KYAT3Q6YP21 454 aaKnown RBP7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 EPM2AIP1Q7L775 607 aaPredicted RBP7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 PTAR1Q7Z6K3 402 aaPredicted RBP7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 PARD3BQ8TEW8 1205 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 OR8D1Q8WZ84 308 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 EDEM1Q92611 657 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 TAF4BQ92750 862 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 GLMNQ92990 594 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 TMUB1Q9BVT8 246 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 ULBP1Q9BZM6 244 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 CLPBQ9H078 707 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 CDH19Q9H159 772 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 TCEAL2Q9H3H9 227 aaPredicted RBP7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 SYNDIG1Q9H7V2 258 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 SPASTQ9UBP0 616 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 PNMA8BQ9ULN7 279 aaPredicted RBP7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 CEP83Q9Y592 693 aa7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 TP53BP1Q12888 1972 aaPredicted RBP7.53□□□□□ -1.2
SPTLC1-205ENST00000477888 F8P00451 2351 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 ZFC3H1O60293 1989 aaKnown RBP7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 MYH10P35580 1976 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 LRRIQ3A6PVS8 624 aaPredicted RBP7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 YJEFN3A6XGL0 299 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 E7ENQ6 273 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 C1QTNF3-AMACRE9PGA6 284 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 STMND1H3BQB6 276 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 K7EM74 188 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 RNF103O00237 685 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 ALOX15BO15296 676 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 NKX2-8O15522 239 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 ATP9BO43861 1147 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 PAK4O96013 591 aaPredicted RBP7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 RPLP0P05388 317 aaKnown RBP7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 TRIM21P19474 475 aaKnown RBP7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 RABIFP47224 123 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 PLK1P53350 603 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 SNRPFP62306 86 aaKnown RBP7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 ZACNQ401N2 412 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 LACTB2Q53H82 288 aaPredicted RBP7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 MS4A13Q5J8X5 152 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 RRAGBQ5VZM2 374 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 NUGGCQ68CJ6 796 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 ESRP1Q6NXG1 681 aaKnown RBP7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 STXBP4Q6ZWJ1 553 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 UNC45BQ8IWX7 931 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 RBFAQ8N0V3 343 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 CFAP52Q8N1V2 620 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 SDR16C5Q8N3Y7 309 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 GPBAR1Q8TDU6 330 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 RNF139Q8WU17 664 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 BTN2A2Q8WVV5 523 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 CCDC74AQ96AQ1 378 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 TBATAQ96M53 351 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 KLF6Q99612 283 aaPredicted RBP7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 CMKLR1Q99788 373 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 SLC17A9Q9BYT1 436 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 LRRN3Q9H3W5 708 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 CYP3A43Q9HB55 503 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 APOBEC3GQ9HC16 384 aaKnown RBP7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 ABCC13Q9NSE7 274 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 CCDC39Q9UFE4 941 aa7.52□□□□□ -1.21
SPTLC1-205ENST00000477888 AGRPO00253 132 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 TULP2O00295 520 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 EIF3DO15371 548 aaKnown RBP eCLIP7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 CLSTN1O94985 981 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 PCDH8O95206 1070 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 CTSLP07711 333 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 ANXA6P08133 673 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 TSHRP16473 764 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 UGT1A3P35503 534 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 NUMBP49757 651 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 ATP1A2P50993 1020 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 MAPK10P53779 464 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 PFN3P60673 137 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms