RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 PRPHP41219 470 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 PTGER3P43115 390 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 TUFMP49411 452 aaKnown RBP4.9□□□□□ -1.63
CKS1B-207ENST00000477676 DGKEP52429 567 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 RAC3P60763 192 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 ATP2C1P98194 919 aaPredicted RBP4.9□□□□□ -1.63
CKS1B-207ENST00000477676 STRN3Q13033 797 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 TRIM29Q14134 588 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 ZNF268Q14587 947 aaPredicted RBP4.9□□□□□ -1.63
CKS1B-207ENST00000477676 USP10Q14694 798 aaKnown RBP4.9□□□□□ -1.63
CKS1B-207ENST00000477676 MTF1Q14872 753 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 TMEM132DQ14C87 1099 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 ZRSR1Q15695 479 aaKnown RBP4.9□□□□□ -1.63
CKS1B-207ENST00000477676 SKIDA1Q1XH10 827 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 KRTAP15-1Q3LI76 137 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 LSM12Q3MHD2 195 aaKnown RBP4.9□□□□□ -1.63
CKS1B-207ENST00000477676 USP39Q53GS9 565 aaKnown RBP4.9□□□□□ -1.63
CKS1B-207ENST00000477676 SLC35F1Q5T1Q4 408 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 PHF19Q5T6S3 580 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 EMC10Q5UCC4 262 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 KRT79Q5XKE5 535 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 ARMCX5Q6P1M9 558 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 USP53Q70EK8 1073 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 PIP4P1Q86T03 277 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 ITIH5Q86UX2 942 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 RASSF3Q86WH2 238 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 PDCL2Q8N4E4 241 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 CCDC33Q8N5R6 958 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 ARL14EPQ8N8R7 260 aaPredicted RBP4.9□□□□□ -1.63
CKS1B-207ENST00000477676 MDGA1Q8NFP4 955 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 WDR48Q8TAF3 677 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 PIP4K2CQ8TBX8 421 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 OSCP1Q8WVF1 389 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 RLN3Q8WXF3 142 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 CD101Q93033 1021 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 NAF1Q96HR8 494 aaKnown RBP4.9□□□□□ -1.63
CKS1B-207ENST00000477676 SGSM3Q96HU1 749 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 GNRHR2Q96P88 292 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 ADOQ96SZ5 270 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 PYM1Q9BRP8 204 aaKnown RBP4.9□□□□□ -1.63
CKS1B-207ENST00000477676 PI4K2AQ9BTU6 479 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 MSTO1Q9BUK6 570 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 TIPINQ9BVW5 301 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 STRA6Q9BX79 667 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 RPF1Q9H9Y2 349 aaKnown RBP4.9□□□□□ -1.63
CKS1B-207ENST00000477676 TMEM30AQ9NV96 361 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 DPP3Q9NY33 737 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 ZFP69BQ9UJL9 534 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 DSEQ9UL01 958 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 L1RE1Q9UN81 338 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 MAGED2Q9UNF1 606 aaPredicted RBP4.9□□□□□ -1.63
CKS1B-207ENST00000477676 NME7Q9Y5B8 376 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 COL6A6A6NMZ7 2263 aa4.9□□□□□ -1.63
CKS1B-207ENST00000477676 TDRD6O60522 2096 aaKnown RBP4.89□□□□□ -1.63
CKS1B-207ENST00000477676 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 SPAARA0A1B0GVQ0 90 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 FAM47E-STBD1D6RA91 191 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 SGK1O00141 431 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 HNRNPDLO14979 420 aaKnown RBP4.89□□□□□ -1.63
CKS1B-207ENST00000477676 ATG13O75143 517 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 PPFIA2O75334 1257 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 RHOBTB1O94844 696 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 CYP17A1P05093 508 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 CEACAM1P13688 526 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 CSRP1P21291 193 aaKnown RBP4.89□□□□□ -1.63
CKS1B-207ENST00000477676 COMTP21964 271 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 GRK2P25098 689 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 GRK3P35626 688 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 AVPR1AP37288 418 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 P2RY2P41231 377 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 MATR3P43243 847 aaKnown RBP eCLIP4.89□□□□□ -1.63
CKS1B-207ENST00000477676 TAF6P49848 677 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 LIG4P49917 911 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 CACNA2D1P54289 1103 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 INHBCP55103 352 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 PPP2R2AP63151 447 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 DGCR2P98153 550 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 GTF2BQ00403 316 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 CYP4F3Q08477 520 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 BFSP1Q12934 665 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 PDGFRLQ15198 375 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 SF1Q15637 639 aaKnown RBP4.89□□□□□ -1.63
CKS1B-207ENST00000477676 ELF2Q15723 593 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 UAP1L1Q3KQV9 507 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 C2orf27AQ580R0 203 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 ANO7Q6IWH7 933 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 TCTN3Q6NUS6 607 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 LRSAM1Q6UWE0 723 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 USP49Q70CQ1 688 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.89□□□□□ -1.63
CKS1B-207ENST00000477676 GPBP1Q86WP2 473 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 NLGN4XQ8N0W4 816 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 IL17RCQ8NAC3 791 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 NUDT10Q8NFP7 164 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 OR2I1PQ8NGU4 316 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 SPPL2BQ8TCT7 592 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 SH3RF2Q8TEC5 729 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 PIGKQ92643 395 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 EXTL1Q92935 676 aa4.89□□□□□ -1.63
CKS1B-207ENST00000477676 WBP2Q969T9 261 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms