RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 RHOAP61586 193 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 CXorf38Q8TB03 319 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 IL1RAPL1Q9NZN1 696 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 VPS28Q9UK41 221 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 HBS1LQ9Y450 684 aaKnown RBP14.86□□□□□ -0.03
HDAC6-220ENST00000477528 LYPLA1O75608 230 aaPredicted RBP14.85□□□□□ -0.03
HDAC6-220ENST00000477528 AP2A1O95782 977 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 CLCN5P51795 746 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 TNS4Q8IZW8 715 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 CRYBG2Q8N1P7 616 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 CARNMT1Q8N4J0 409 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 PPP2R3CQ969Q6 453 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 CNDP1Q96KN2 507 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 FCRL2Q96LA5 508 aaPredicted RBP14.85□□□□□ -0.03
HDAC6-220ENST00000477528 ATP13A1Q9HD20 1204 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 EIF2B3Q9NR50 452 aaKnown RBP14.85□□□□□ -0.03
HDAC6-220ENST00000477528 RAP2CQ9Y3L5 183 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 NCF1BA6NI72 391 aaPredicted RBP14.85□□□□□ -0.03
HDAC6-220ENST00000477528 NCF1CA8MVU1 366 aaPredicted RBP14.85□□□□□ -0.03
HDAC6-220ENST00000477528 ZNF197O14709 1029 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 NCF1P14598 390 aaPredicted RBP14.85□□□□□ -0.03
HDAC6-220ENST00000477528 ATP5F1P24539 256 aaPredicted RBP14.85□□□□□ -0.03
HDAC6-220ENST00000477528 GRIA4P48058 902 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 PTDSS1P48651 473 aaKnown RBP14.85□□□□□ -0.03
HDAC6-220ENST00000477528 HK2P52789 917 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 SEMA5AQ13591 1074 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 ARHGEF7Q14155 803 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 CERCAMQ5T4B2 595 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 HERC6Q8IVU3 1022 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 ZNF567Q8N184 647 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 FAM13CQ8NE31 585 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 RIN3Q8TB24 985 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 MRPL9Q9BYD2 267 aaKnown RBP14.85□□□□□ -0.03
HDAC6-220ENST00000477528 TAS2R13Q9NYV9 303 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 SNX5Q9Y5X3 404 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 MYH4Q9Y623 1939 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 TCRBV7S3A2A0A539 114 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 MGRN1O60291 552 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 PFDN1O60925 122 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 RASSF9O75901 435 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 LTA4HP09960 611 aaKnown RBP14.85□□□□□ -0.03
HDAC6-220ENST00000477528 PSMA4P25789 261 aaKnown RBP14.85□□□□□ -0.03
HDAC6-220ENST00000477528 CD86P42081 329 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 PSEN1P49768 467 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 SLC25A3Q00325 362 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 UBAP2LQ14157 1087 aaKnown RBP14.85□□□□□ -0.03
HDAC6-220ENST00000477528 SIX1Q15475 284 aaPredicted RBP14.85□□□□□ -0.03
HDAC6-220ENST00000477528 MFN1Q8IWA4 741 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 LPCAT1Q8NF37 534 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 CLEC4CQ8WTT0 213 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 ASB2Q96Q27 587 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 SEPT3Q9UH03 358 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 CFAP99D6REC4 459 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 HDAC3O15379 428 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 STAU1O95793 577 aaKnown RBP14.85□□□□□ -0.03
HDAC6-220ENST00000477528 ZCCHC18P0CG32 403 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 ME2P23368 584 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 PHEXP78562 749 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 SATB1Q01826 763 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 KRT72Q14CN4 511 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 LIPMQ5VYY2 423 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 RHBDF2Q6PJF5 856 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 KCTD4Q8WVF5 259 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 ZNF184Q99676 751 aaPredicted RBP14.85□□□□□ -0.03
HDAC6-220ENST00000477528 NMUR2Q9GZQ4 415 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 CLPBQ9H078 707 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 RHOJQ9H4E5 214 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 PKD2L2Q9NZM6 624 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 LAMB2P55268 1798 aa14.85□□□□□ -0.03
HDAC6-220ENST00000477528 ENO4A6NNW6 628 aa14.84□□□□□ -0.03
HDAC6-220ENST00000477528 PAGE1O75459 146 aa14.84□□□□□ -0.03
HDAC6-220ENST00000477528 MAP4P27816 1152 aaKnown RBP14.84□□□□□ -0.03
HDAC6-220ENST00000477528 ATXN1P54253 815 aaKnown RBP14.84□□□□□ -0.03
HDAC6-220ENST00000477528 FASTKQ14296 549 aaKnown RBP14.84□□□□□ -0.03
HDAC6-220ENST00000477528 NOMO2Q5JPE7 1267 aa14.84□□□□□ -0.03
HDAC6-220ENST00000477528 IRGCQ6NXR0 463 aa14.84□□□□□ -0.03
HDAC6-220ENST00000477528 TTC23LQ6PF05 361 aa14.84□□□□□ -0.03
HDAC6-220ENST00000477528 CDRT15Q96T59 188 aa14.84□□□□□ -0.03
HDAC6-220ENST00000477528 GBA3Q9H227 469 aa14.84□□□□□ -0.03
HDAC6-220ENST00000477528 GLOD4Q9HC38 313 aa14.84□□□□□ -0.03
HDAC6-220ENST00000477528 WWOXQ9NZC7 414 aa14.84□□□□□ -0.03
HDAC6-220ENST00000477528 DDX60LQ5H9U9 1706 aaKnown RBP14.84□□□□□ -0.03
HDAC6-220ENST00000477528 TBKBP1A7MCY6 615 aa14.84□□□□□ -0.03
HDAC6-220ENST00000477528 NR5A2O00482 541 aa14.84□□□□□ -0.03
HDAC6-220ENST00000477528 ZBTB24O43167 697 aaPredicted RBP14.84□□□□□ -0.03
HDAC6-220ENST00000477528 SNUPNO95149 360 aaKnown RBP14.84□□□□□ -0.03
HDAC6-220ENST00000477528 C6orf89Q6UWU4 347 aa14.84□□□□□ -0.03
HDAC6-220ENST00000477528 PIWIL4Q7Z3Z4 852 aaKnown RBP14.84□□□□□ -0.03
HDAC6-220ENST00000477528 UBA2Q9UBT2 640 aaPredicted RBP14.84□□□□□ -0.03
HDAC6-220ENST00000477528 FAM8A1Q9UBU6 413 aa14.84□□□□□ -0.03
HDAC6-220ENST00000477528 CHKBQ9Y259 395 aa14.84□□□□□ -0.03
HDAC6-220ENST00000477528 MT-CO1P00395 513 aa14.84□□□□□ -0.03
HDAC6-220ENST00000477528 ITGALP20701 1170 aa14.84□□□□□ -0.03
HDAC6-220ENST00000477528 DAOAP59103 153 aa14.84□□□□□ -0.03
HDAC6-220ENST00000477528 RAP1GAP2Q684P5 730 aa14.84□□□□□ -0.03
HDAC6-220ENST00000477528 ZFP1Q6P2D0 407 aa14.84□□□□□ -0.03
HDAC6-220ENST00000477528 OLFML1Q6UWY5 402 aa14.84□□□□□ -0.03
HDAC6-220ENST00000477528 SLC35F5Q8WV83 523 aa14.84□□□□□ -0.03
HDAC6-220ENST00000477528 DCAKDQ8WVC6 231 aa14.84□□□□□ -0.03
HDAC6-220ENST00000477528 BHMTQ93088 406 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms