RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 SLC12A6Q9UHW9 1150 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 EIF2B4Q9UI10 523 aaKnown RBP7.53□□□□□ -1.2
BRCA1-214ENST00000477152 GGA2Q9UJY4 613 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 TSPAN16Q9UKR8 245 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 MAPK8IP1Q9UQF2 711 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 PCDHB14Q9Y5E9 798 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 PSMA7O14818 248 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 TNFSF14O43557 240 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 MAGEC1O60732 1142 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 GJB3O75712 270 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 SEMA4FO95754 770 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 CD27P26842 260 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 ACADSBP45954 432 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 PGFP49763 221 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 NDUFA8P51970 172 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 SNX16P57768 344 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 RING1Q06587 406 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 ADIGQ0VDE8 80 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 COBLL1Q53SF7 1204 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 ZNF658Q5TYW1 1059 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-214ENST00000477152 BSPRYQ5W0U4 402 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 PROSER1Q86XN7 944 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 OXR1Q8N573 874 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.53□□□□□ -1.2
BRCA1-214ENST00000477152 HJURPQ8NCD3 748 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-214ENST00000477152 IGSF8Q969P0 613 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 HSFY1Q96LI6 401 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 FAM81BQ96LP2 452 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 SERPINB11Q96P15 392 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 NT5C1BQ96P26 610 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 ACE2Q9BYF1 805 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-214ENST00000477152 MKRN2Q9H000 416 aaKnown RBP7.53□□□□□ -1.2
BRCA1-214ENST00000477152 FSCN3Q9NQT6 498 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 STOML2Q9UJZ1 356 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 PCOLCE2Q9UKZ9 415 aa7.53□□□□□ -1.2
BRCA1-214ENST00000477152 TARSL2A2RTX5 802 aaKnown RBP7.52□□□□□ -1.21
BRCA1-214ENST00000477152 P4HA2O15460 535 aa7.52□□□□□ -1.21
BRCA1-214ENST00000477152 MED7O43513 233 aa7.52□□□□□ -1.21
BRCA1-214ENST00000477152 FGFR1OPO95684 399 aaKnown RBP7.52□□□□□ -1.21
BRCA1-214ENST00000477152 TOP3BO95985 862 aaKnown RBP7.52□□□□□ -1.21
BRCA1-214ENST00000477152 APOEP02649 317 aa7.52□□□□□ -1.21
BRCA1-214ENST00000477152 SRPRAP08240 638 aaKnown RBP7.52□□□□□ -1.21
BRCA1-214ENST00000477152 PRKCHP24723 683 aa7.52□□□□□ -1.21
BRCA1-214ENST00000477152 HNF1BP35680 557 aa7.52□□□□□ -1.21
BRCA1-214ENST00000477152 NUDT1P36639 197 aa7.52□□□□□ -1.21
BRCA1-214ENST00000477152 TBX4P57082 545 aa7.52□□□□□ -1.21
BRCA1-214ENST00000477152 CCDC15Q0P6D6 951 aa7.52□□□□□ -1.21
BRCA1-214ENST00000477152 SCAPQ12770 1279 aa7.52□□□□□ -1.21
BRCA1-214ENST00000477152 ACAP1Q15027 740 aa7.52□□□□□ -1.21
BRCA1-214ENST00000477152 MBLAC2Q68D91 279 aa7.52□□□□□ -1.21
BRCA1-214ENST00000477152 CCNI2Q6ZMN8 369 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-214ENST00000477152 FAM124AQ86V42 546 aa7.52□□□□□ -1.21
BRCA1-214ENST00000477152 MFN1Q8IWA4 741 aa7.52□□□□□ -1.21
BRCA1-214ENST00000477152 SMARCE1Q969G3 411 aa7.52□□□□□ -1.21
BRCA1-214ENST00000477152 ELMO3Q96BJ8 720 aa7.52□□□□□ -1.21
BRCA1-214ENST00000477152 ERLEC1Q96DZ1 483 aa7.52□□□□□ -1.21
BRCA1-214ENST00000477152 SLC6A17Q9H1V8 727 aa7.52□□□□□ -1.21
BRCA1-214ENST00000477152 ABCB8Q9NUT2 735 aa7.52□□□□□ -1.21
BRCA1-214ENST00000477152 TMEM51Q9NW97 253 aa7.52□□□□□ -1.21
BRCA1-214ENST00000477152 COQ4Q9Y3A0 265 aa7.52□□□□□ -1.21
BRCA1-214ENST00000477152 CEP83Q9Y592 693 aa7.52□□□□□ -1.21
BRCA1-214ENST00000477152 GON4LQ3T8J9 2241 aa7.52□□□□□ -1.21
BRCA1-214ENST00000477152 DNAH14Q0VDD8 3507 aa7.52□□□□□ -1.21
BRCA1-214ENST00000477152 CACNA1EQ15878 2313 aa7.52□□□□□ -1.21
BRCA1-214ENST00000477152 CHD8Q9HCK8 2581 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 BICDL2A1A5D9 508 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 CAPN9O14815 690 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 PCDHGA12O60330 932 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 ACSL4O60488 711 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 TSPAN3O60637 253 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 TBL1XO60907 577 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 FSBPO95073 299 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 C1SP09871 688 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 LCP1P13796 627 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 HOXD9P28356 352 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-214ENST00000477152 COPAP53621 1224 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 SULT2A1Q06520 285 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 SLC12A1Q13621 1099 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 CDH18Q13634 790 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 CNGA2Q16280 664 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 CCDC40Q4G0X9 1142 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 ZCWPW2Q504Y3 356 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 HS1BP3Q53T59 392 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 MSANTD2Q6P1R3 559 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 LCLAT1Q6UWP7 414 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 TMPRSS7Q7RTY8 843 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 DSG4Q86SJ6 1040 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 OR2I1PQ8NGU4 316 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 FERD3LQ96RJ6 166 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 OMDQ99983 421 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 SRRTQ9BXP5 876 aaKnown RBP7.51□□□□□ -1.21
BRCA1-214ENST00000477152 TMEM245Q9H330 911 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 PIF1Q9H611 641 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 DKK4Q9UBT3 224 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 FTSJ1Q9UET6 329 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 ANKRD6Q9Y2G4 727 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-214ENST00000477152 PCDHB4Q9Y5E5 795 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 A0A1B0GVT2 93 aa7.51□□□□□ -1.21
BRCA1-214ENST00000477152 KCNJ18B7U540 433 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms