RNA–Protein interactions for RNA: ENST00000477132.1

PRKD3-209, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-209ENST00000477132 CADM4Q8NFZ8 388 aa12.55□□□□□ -0.4
PRKD3-209ENST00000477132 ARHGEF2Q92974 986 aaKnown RBP12.55□□□□□ -0.4
PRKD3-209ENST00000477132 TRIM11Q96F44 468 aa12.55□□□□□ -0.4
PRKD3-209ENST00000477132 BTBD6Q96KE9 485 aa12.55□□□□□ -0.4
PRKD3-209ENST00000477132 SNRNP25Q9BV90 132 aaKnown RBP12.55□□□□□ -0.4
PRKD3-209ENST00000477132 NEUROG2Q9H2A3 272 aa12.55□□□□□ -0.4
PRKD3-209ENST00000477132 CAPN10Q9HC96 672 aa12.55□□□□□ -0.4
PRKD3-209ENST00000477132 FBXL12Q9NXK8 326 aa12.55□□□□□ -0.4
PRKD3-209ENST00000477132 PCSK1NQ9UHG2 260 aa12.55□□□□□ -0.4
PRKD3-209ENST00000477132 EVLQ9UI08 416 aaPredicted RBP12.55□□□□□ -0.4
PRKD3-209ENST00000477132 AP4E1Q9UPM8 1137 aa12.55□□□□□ -0.4
PRKD3-209ENST00000477132 SCINQ9Y6U3 715 aa12.55□□□□□ -0.4
PRKD3-209ENST00000477132 MEI4A8MW99 385 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 C10orf142B7Z368 130 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 CDX4O14627 284 aaPredicted RBP12.54□□□□□ -0.4
PRKD3-209ENST00000477132 BNIP3LO60238 219 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 FOXD2O60548 495 aaPredicted RBP12.54□□□□□ -0.4
PRKD3-209ENST00000477132 MFAP3LO75121 409 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 SEMA4FO95754 770 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 IL1BP01584 269 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 CFIP05156 583 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 IL1R2P27930 398 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 EPHB2P29323 1055 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 HOXD12P35452 270 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 SERPINH1P50454 418 aaKnown RBP12.54□□□□□ -0.4
PRKD3-209ENST00000477132 LIMK1P53667 647 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 ADKP55263 362 aaKnown RBP12.54□□□□□ -0.4
PRKD3-209ENST00000477132 TRIM14Q14142 442 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 PUM1Q14671 1186 aaKnown RBP eCLIP12.54□□□□□ -0.4
PRKD3-209ENST00000477132 POM121L1PQ3SYA9 428 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 CCDC122Q5T0U0 273 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 STPG1Q5TH74 334 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 IL31Q6EBC2 164 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 ALKBH5Q6P6C2 394 aaKnown RBP12.54□□□□□ -0.4
PRKD3-209ENST00000477132 LEKR1Q6ZMV7 388 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 USP30Q70CQ3 517 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 VPS36Q86VN1 386 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 CPNE8Q86YQ8 564 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 RGL4Q8IZJ4 473 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 CHST14Q8NCH0 376 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 OR2A12Q8NGT7 310 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 DNASE2BQ8WZ79 361 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 FOXJ1Q92949 421 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 FAM131CQ96AQ9 280 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 KCTD15Q96SI1 283 aaPredicted RBP12.54□□□□□ -0.4
PRKD3-209ENST00000477132 CHP1Q99653 195 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 ORAI3Q9BRQ5 295 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 PACSIN1Q9BY11 444 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 KLC2Q9H0B6 622 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 BTBD1Q9H0C5 482 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 RBSNQ9H1K0 784 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 TNKS2Q9H2K2 1166 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 DHX35Q9H5Z1 703 aaKnown RBP12.54□□□□□ -0.4
PRKD3-209ENST00000477132 ABHD10Q9NUJ1 306 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 PPM1HQ9ULR3 514 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 SCML1Q9UN30 329 aa12.54□□□□□ -0.4
PRKD3-209ENST00000477132 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.54□□□□□ -0.4
PRKD3-209ENST00000477132 FCF1Q9Y324 198 aaKnown RBP12.54□□□□□ -0.4
PRKD3-209ENST00000477132 DCDC2BA2VCK2 349 aa12.53□□□□□ -0.4
PRKD3-209ENST00000477132 WASH4PA8MWX3 477 aa12.53□□□□□ -0.4
PRKD3-209ENST00000477132 MCF2LO15068 1137 aa12.53□□□□□ -0.4
PRKD3-209ENST00000477132 RAMP2O60895 175 aa12.53□□□□□ -0.4
PRKD3-209ENST00000477132 RNASEH1O60930 286 aaKnown RBP12.53□□□□□ -0.4
PRKD3-209ENST00000477132 RNASEH2AO75792 299 aaKnown RBP12.53□□□□□ -0.4
PRKD3-209ENST00000477132 ADH1BP00325 375 aa12.53□□□□□ -0.4
PRKD3-209ENST00000477132 CYP1A2P05177 515 aa12.53□□□□□ -0.4
PRKD3-209ENST00000477132 IGHV4-34P06331 123 aa12.53□□□□□ -0.4
PRKD3-209ENST00000477132 ENGP17813 658 aa12.53□□□□□ -0.4
PRKD3-209ENST00000477132 C5AR1P21730 350 aa12.53□□□□□ -0.4
PRKD3-209ENST00000477132 GALCP54803 685 aa12.53□□□□□ -0.4
PRKD3-209ENST00000477132 ADPRHP54922 357 aa12.53□□□□□ -0.4
PRKD3-209ENST00000477132 TBX2Q13207 712 aaPredicted RBP12.53□□□□□ -0.4
PRKD3-209ENST00000477132 DUOXA1Q1HG43 343 aa12.53□□□□□ -0.4
PRKD3-209ENST00000477132 TXNRD3NBQ6F5E7 133 aa12.53□□□□□ -0.4
PRKD3-209ENST00000477132 SARM1Q6SZW1 724 aa12.53□□□□□ -0.4
PRKD3-209ENST00000477132 GAS2L3Q86XJ1 694 aa12.53□□□□□ -0.4
PRKD3-209ENST00000477132 HDDC3Q8N4P3 179 aa12.53□□□□□ -0.4
PRKD3-209ENST00000477132 ZCCHC9Q8N567 271 aaKnown RBP12.53□□□□□ -0.4
PRKD3-209ENST00000477132 OR8K1Q8NGG5 319 aa12.53□□□□□ -0.4
PRKD3-209ENST00000477132 OR2I1PQ8NGU4 316 aa12.53□□□□□ -0.4
PRKD3-209ENST00000477132 C1orf216Q8TAB5 229 aa12.53□□□□□ -0.4
PRKD3-209ENST00000477132 PIP4K2CQ8TBX8 421 aa12.53□□□□□ -0.4
PRKD3-209ENST00000477132 GANCQ8TET4 914 aa12.53□□□□□ -0.4
PRKD3-209ENST00000477132 OR8D1Q8WZ84 308 aa12.53□□□□□ -0.4
PRKD3-209ENST00000477132 VOPP1Q96AW1 172 aa12.53□□□□□ -0.4
PRKD3-209ENST00000477132 BIRC7Q96CA5 298 aa12.53□□□□□ -0.4
PRKD3-209ENST00000477132 EPAS1Q99814 870 aa12.53□□□□□ -0.4
PRKD3-209ENST00000477132 RTKNQ9BST9 563 aa12.53□□□□□ -0.4
PRKD3-209ENST00000477132 NUP85Q9BW27 656 aa12.53□□□□□ -0.4
PRKD3-209ENST00000477132 RETREG1Q9H6L5 497 aa12.53□□□□□ -0.4
PRKD3-209ENST00000477132 SGK2Q9HBY8 427 aa12.53□□□□□ -0.4
PRKD3-209ENST00000477132 MRPL47Q9HD33 250 aaKnown RBP12.53□□□□□ -0.4
PRKD3-209ENST00000477132 EIF2B4Q9UI10 523 aaKnown RBP12.53□□□□□ -0.4
PRKD3-209ENST00000477132 FAM47DPA6NHR8 397 aa12.52□□□□□ -0.41
PRKD3-209ENST00000477132 C4orf47A7E2U8 309 aa12.52□□□□□ -0.41
PRKD3-209ENST00000477132 TM4SF5O14894 197 aa12.52□□□□□ -0.41
PRKD3-209ENST00000477132 ALOX15BO15296 676 aa12.52□□□□□ -0.41
PRKD3-209ENST00000477132 RNF8O76064 485 aa12.52□□□□□ -0.41
PRKD3-209ENST00000477132 SERPINF2P08697 491 aa12.52□□□□□ -0.41
PRKD3-209ENST00000477132 GOT1P17174 413 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms