RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 ADKP55263 362 aaKnown RBP15.76■□□□□ 0.11
SMG5-204ENST00000476954 GOLGA7BQ2TAP0 167 aa15.76■□□□□ 0.11
SMG5-204ENST00000476954 NUGGCQ68CJ6 796 aa15.76■□□□□ 0.11
SMG5-204ENST00000476954 ARHGAP17Q68EM7 881 aa15.76■□□□□ 0.11
SMG5-204ENST00000476954 CCDC117Q8IWD4 279 aaPredicted RBP15.76■□□□□ 0.11
SMG5-204ENST00000476954 LGI2Q8N0V4 545 aa15.76■□□□□ 0.11
SMG5-204ENST00000476954 SDR16C5Q8N3Y7 309 aa15.76■□□□□ 0.11
SMG5-204ENST00000476954 WDR48Q8TAF3 677 aa15.76■□□□□ 0.11
SMG5-204ENST00000476954 TAS1R2Q8TE23 839 aa15.76■□□□□ 0.11
SMG5-204ENST00000476954 FCRL2Q96LA5 508 aaPredicted RBP15.76■□□□□ 0.11
SMG5-204ENST00000476954 IPO9Q96P70 1041 aaKnown RBP15.76■□□□□ 0.11
SMG5-204ENST00000476954 GFM1Q96RP9 751 aaKnown RBP15.76■□□□□ 0.11
SMG5-204ENST00000476954 STRADBQ9C0K7 418 aa15.76■□□□□ 0.11
SMG5-204ENST00000476954 SLC39A2Q9NP94 309 aa15.76■□□□□ 0.11
SMG5-204ENST00000476954 TMPRSS4Q9NRS4 437 aa15.76■□□□□ 0.11
SMG5-204ENST00000476954 PNMA8BQ9ULN7 279 aaPredicted RBP15.76■□□□□ 0.11
SMG5-204ENST00000476954 CRYBG3Q68DQ2 2970 aa15.76■□□□□ 0.11
SMG5-204ENST00000476954 C9orf172C9J069 976 aa15.75■□□□□ 0.11
SMG5-204ENST00000476954 PIK3R2O00459 728 aa15.75■□□□□ 0.11
SMG5-204ENST00000476954 MCF2LO15068 1137 aa15.75■□□□□ 0.11
SMG5-204ENST00000476954 GABBR2O75899 941 aa15.75■□□□□ 0.11
SMG5-204ENST00000476954 AGFG2O95081 481 aa15.75■□□□□ 0.11
SMG5-204ENST00000476954 MOCS2O96007 188 aaPredicted RBP15.75■□□□□ 0.11
SMG5-204ENST00000476954 RPLP0P05388 317 aaKnown RBP15.75■□□□□ 0.11
SMG5-204ENST00000476954 CELA2BP08218 269 aaPredicted RBP15.75■□□□□ 0.11
SMG5-204ENST00000476954 CD97P48960 835 aa15.75■□□□□ 0.11
SMG5-204ENST00000476954 RPIAP49247 311 aa15.75■□□□□ 0.11
SMG5-204ENST00000476954 CEBPZQ03701 1054 aaKnown RBP15.75■□□□□ 0.11
SMG5-204ENST00000476954 PDE1CQ14123 709 aaPredicted RBP15.75■□□□□ 0.11
SMG5-204ENST00000476954 TMEM259Q4ZIN3 620 aa15.75■□□□□ 0.11
SMG5-204ENST00000476954 NEK5Q6P3R8 708 aa15.75■□□□□ 0.11
SMG5-204ENST00000476954 KYAT3Q6YP21 454 aaKnown RBP15.75■□□□□ 0.11
SMG5-204ENST00000476954 CIR1Q86X95 450 aaPredicted RBP15.75■□□□□ 0.11
SMG5-204ENST00000476954 DCP2Q8IU60 420 aaKnown RBP15.75■□□□□ 0.11
SMG5-204ENST00000476954 AZIN2Q96A70 460 aa15.75■□□□□ 0.11
SMG5-204ENST00000476954 CCDC74AQ96AQ1 378 aa15.75■□□□□ 0.11
SMG5-204ENST00000476954 BACH2Q9BYV9 841 aa15.75■□□□□ 0.11
SMG5-204ENST00000476954 GULP1Q9UBP9 304 aa15.75■□□□□ 0.11
SMG5-204ENST00000476954 IPO11Q9UI26 975 aaKnown RBP15.75■□□□□ 0.11
SMG5-204ENST00000476954 PCDHB11Q9Y5F2 797 aa15.75■□□□□ 0.11
SMG5-204ENST00000476954 HS3ST3A1Q9Y663 406 aa15.75■□□□□ 0.11
SMG5-204ENST00000476954 KPNA3O00505 521 aaPredicted RBP15.74■□□□□ 0.11
SMG5-204ENST00000476954 XPO1O14980 1071 aaKnown RBP15.74■□□□□ 0.11
SMG5-204ENST00000476954 YY2O15391 372 aa15.74■□□□□ 0.11
SMG5-204ENST00000476954 CD2BP2O95400 341 aaKnown RBP15.74■□□□□ 0.11
SMG5-204ENST00000476954 PAK4O96013 591 aaPredicted RBP15.74■□□□□ 0.11
SMG5-204ENST00000476954 LCP1P13796 627 aa15.74■□□□□ 0.11
SMG5-204ENST00000476954 MLLT10P55197 1068 aa15.74■□□□□ 0.11
SMG5-204ENST00000476954 DAOAP59103 153 aa15.74■□□□□ 0.11
SMG5-204ENST00000476954 DLG2Q15700 870 aa15.74■□□□□ 0.11
SMG5-204ENST00000476954 KNOP1Q1ED39 458 aaKnown RBP15.74■□□□□ 0.11
SMG5-204ENST00000476954 FAM173BQ6P4H8 233 aa15.74■□□□□ 0.11
SMG5-204ENST00000476954 BRAPQ7Z569 592 aa15.74■□□□□ 0.11
SMG5-204ENST00000476954 C9orf43Q8TAL5 461 aaPredicted RBP15.74■□□□□ 0.11
SMG5-204ENST00000476954 UBA3Q8TBC4 463 aa15.74■□□□□ 0.11
SMG5-204ENST00000476954 LRRC61Q9BV99 259 aa15.74■□□□□ 0.11
SMG5-204ENST00000476954 CPEB1Q9BZB8 566 aaKnown RBP15.74■□□□□ 0.11
SMG5-204ENST00000476954 CLPBQ9H078 707 aa15.74■□□□□ 0.11
SMG5-204ENST00000476954 TNMDQ9H2S6 317 aa15.74■□□□□ 0.11
SMG5-204ENST00000476954 KBTBD4Q9NVX7 518 aa15.74■□□□□ 0.11
SMG5-204ENST00000476954 DMAC2Q9NW81 257 aa15.74■□□□□ 0.11
SMG5-204ENST00000476954 TUBD1Q9UJT1 453 aa15.74■□□□□ 0.11
SMG5-204ENST00000476954 SPTLC2O15270 562 aa15.73■□□□□ 0.11
SMG5-204ENST00000476954 ATP9BO43861 1147 aa15.73■□□□□ 0.11
SMG5-204ENST00000476954 KRT7P08729 469 aa15.73■□□□□ 0.11
SMG5-204ENST00000476954 CCKBRP32239 447 aa15.73■□□□□ 0.11
SMG5-204ENST00000476954 GCLMP48507 274 aa15.73■□□□□ 0.11
SMG5-204ENST00000476954 TCEA2Q15560 299 aa15.73■□□□□ 0.11
SMG5-204ENST00000476954 E2F4Q16254 413 aa15.73■□□□□ 0.11
SMG5-204ENST00000476954 PRRT3Q5FWE3 981 aa15.73■□□□□ 0.11
SMG5-204ENST00000476954 RAP1GAP2Q684P5 730 aa15.73■□□□□ 0.11
SMG5-204ENST00000476954 ATCAYQ86WG3 371 aa15.73■□□□□ 0.11
SMG5-204ENST00000476954 SIX6OS1Q8N1H7 587 aa15.73■□□□□ 0.11
SMG5-204ENST00000476954 KYQ8NBH2 561 aa15.73■□□□□ 0.11
SMG5-204ENST00000476954 OR52K2Q8NGK3 314 aa15.73■□□□□ 0.11
SMG5-204ENST00000476954 SPATA20Q8TB22 786 aa15.73■□□□□ 0.11
SMG5-204ENST00000476954 TMC2Q8TDI7 906 aa15.73■□□□□ 0.11
SMG5-204ENST00000476954 CLEC4CQ8WTT0 213 aa15.73■□□□□ 0.11
SMG5-204ENST00000476954 GLMNQ92990 594 aa15.73■□□□□ 0.11
SMG5-204ENST00000476954 DDX50Q9BQ39 737 aaKnown RBP15.73■□□□□ 0.11
SMG5-204ENST00000476954 SLC17A9Q9BYT1 436 aa15.73■□□□□ 0.11
SMG5-204ENST00000476954 CISHQ9NSE2 258 aa15.73■□□□□ 0.11
SMG5-204ENST00000476954 SIRPGQ9P1W8 387 aa15.73■□□□□ 0.11
SMG5-204ENST00000476954 CGNQ9P2M7 1197 aaKnown RBP15.73■□□□□ 0.11
SMG5-204ENST00000476954 SPASTQ9UBP0 616 aa15.73■□□□□ 0.11
SMG5-204ENST00000476954 APOBEC3BQ9UH17 382 aaKnown RBP15.73■□□□□ 0.11
SMG5-204ENST00000476954 TSPAN16Q9UKR8 245 aa15.73■□□□□ 0.11
SMG5-204ENST00000476954 DAAM1Q9Y4D1 1078 aa15.73■□□□□ 0.11
SMG5-204ENST00000476954 RIOK3O14730 519 aaKnown RBP15.72■□□□□ 0.11
SMG5-204ENST00000476954 ALOX15BO15296 676 aa15.72■□□□□ 0.11
SMG5-204ENST00000476954 ANXA6P08133 673 aa15.72■□□□□ 0.11
SMG5-204ENST00000476954 TRIM49P0CI25 452 aa15.72■□□□□ 0.11
SMG5-204ENST00000476954 TRIM49CP0CI26 452 aa15.72■□□□□ 0.11
SMG5-204ENST00000476954 RGS7P49802 495 aa15.72■□□□□ 0.11
SMG5-204ENST00000476954 PPP3CAQ08209 521 aa15.72■□□□□ 0.11
SMG5-204ENST00000476954 CHST14Q8NCH0 376 aa15.72■□□□□ 0.11
SMG5-204ENST00000476954 ERCC4Q92889 916 aaPredicted RBP15.72■□□□□ 0.11
SMG5-204ENST00000476954 KLF6Q99612 283 aaPredicted RBP15.72■□□□□ 0.11
SMG5-204ENST00000476954 IMPG2Q9BZV3 1241 aa15.72■□□□□ 0.11
SMG5-204ENST00000476954 BLZF1Q9H2G9 400 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms