RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 EIF3CQ99613 913 aaKnown RBP14.54□□□□□ -0.08
VAMP4-203ENST00000474047 SNRNP25Q9BV90 132 aaKnown RBP14.54□□□□□ -0.08
VAMP4-203ENST00000474047 MIR1-1HGQ9H1L0 117 aa14.54□□□□□ -0.08
VAMP4-203ENST00000474047 SGK2Q9HBY8 427 aa14.54□□□□□ -0.08
VAMP4-203ENST00000474047 CTTNBP2NLQ9P2B4 639 aa14.54□□□□□ -0.08
VAMP4-203ENST00000474047 ZNF212Q9UDV6 495 aa14.54□□□□□ -0.08
VAMP4-203ENST00000474047 PILRBQ9UKJ0 227 aa14.54□□□□□ -0.08
VAMP4-203ENST00000474047 CACNA1AO00555 2505 aa14.53□□□□□ -0.08
VAMP4-203ENST00000474047 GON4LQ3T8J9 2241 aa14.53□□□□□ -0.08
VAMP4-203ENST00000474047 C1QTNF3-AMACRE9PGA6 284 aa14.53□□□□□ -0.08
VAMP4-203ENST00000474047 K7ERQ8 282 aa14.53□□□□□ -0.08
VAMP4-203ENST00000474047 SEMA4FO95754 770 aa14.53□□□□□ -0.08
VAMP4-203ENST00000474047 H2AFZP0C0S5 128 aa14.53□□□□□ -0.08
VAMP4-203ENST00000474047 ACSL1P33121 698 aa14.53□□□□□ -0.08
VAMP4-203ENST00000474047 ACVRL1P37023 503 aa14.53□□□□□ -0.08
VAMP4-203ENST00000474047 MAPK8IP2Q13387 824 aaPredicted RBP14.53□□□□□ -0.08
VAMP4-203ENST00000474047 DUOXA1Q1HG43 343 aa14.53□□□□□ -0.08
VAMP4-203ENST00000474047 H2AFVQ71UI9 128 aa14.53□□□□□ -0.08
VAMP4-203ENST00000474047 HDDC3Q8N4P3 179 aa14.53□□□□□ -0.08
VAMP4-203ENST00000474047 ZWILCHQ9H900 591 aa14.53□□□□□ -0.08
VAMP4-203ENST00000474047 NHEJ1Q9H9Q4 299 aaPredicted RBP14.53□□□□□ -0.08
VAMP4-203ENST00000474047 TMEM74BQ9NUR3 256 aa14.53□□□□□ -0.08
VAMP4-203ENST00000474047 NDFIP2Q9NV92 336 aa14.53□□□□□ -0.08
VAMP4-203ENST00000474047 SUSD2Q9UGT4 822 aa14.53□□□□□ -0.08
VAMP4-203ENST00000474047 MYO15AQ9UKN7 3530 aa14.53□□□□□ -0.08
VAMP4-203ENST00000474047 USP34Q70CQ2 3546 aa14.53□□□□□ -0.08
VAMP4-203ENST00000474047 METTL12A8MUP2 240 aa14.52□□□□□ -0.08
VAMP4-203ENST00000474047 PATE3B3GLJ2 98 aa14.52□□□□□ -0.08
VAMP4-203ENST00000474047 MCF2LO15068 1137 aa14.52□□□□□ -0.08
VAMP4-203ENST00000474047 ALOX15BO15296 676 aa14.52□□□□□ -0.08
VAMP4-203ENST00000474047 LRCH4O75427 683 aa14.52□□□□□ -0.08
VAMP4-203ENST00000474047 MAOBP27338 520 aa14.52□□□□□ -0.08
VAMP4-203ENST00000474047 HOXD12P35452 270 aa14.52□□□□□ -0.08
VAMP4-203ENST00000474047 PCK1P35558 622 aa14.52□□□□□ -0.08
VAMP4-203ENST00000474047 BOLA3Q53S33 107 aa14.52□□□□□ -0.08
VAMP4-203ENST00000474047 ARTNQ5T4W7 220 aa14.52□□□□□ -0.08
VAMP4-203ENST00000474047 DCAF12L1Q5VU92 463 aa14.52□□□□□ -0.08
VAMP4-203ENST00000474047 PSTKQ8IV42 348 aaKnown RBP14.52□□□□□ -0.08
VAMP4-203ENST00000474047 ARFGAP1Q8N6T3 406 aa14.52□□□□□ -0.08
VAMP4-203ENST00000474047 ZNF564Q8TBZ8 553 aaPredicted RBP14.52□□□□□ -0.08
VAMP4-203ENST00000474047 NETO1Q8TDF5 533 aa14.52□□□□□ -0.08
VAMP4-203ENST00000474047 ARHGEF26Q96DR7 871 aa14.52□□□□□ -0.08
VAMP4-203ENST00000474047 BTBD6Q96KE9 485 aa14.52□□□□□ -0.08
VAMP4-203ENST00000474047 CHP1Q99653 195 aa14.52□□□□□ -0.08
VAMP4-203ENST00000474047 ANP32EQ9BTT0 268 aa14.52□□□□□ -0.08
VAMP4-203ENST00000474047 PCED1AQ9H1Q7 454 aa14.52□□□□□ -0.08
VAMP4-203ENST00000474047 TNKS2Q9H2K2 1166 aa14.52□□□□□ -0.08
VAMP4-203ENST00000474047 WDR87Q6ZQQ6 2873 aa14.52□□□□□ -0.09
VAMP4-203ENST00000474047 LRRC72A6NJI9 287 aa14.52□□□□□ -0.09
VAMP4-203ENST00000474047 SMAD6O43541 496 aaKnown RBP14.52□□□□□ -0.09
VAMP4-203ENST00000474047 BUB1O43683 1085 aa14.52□□□□□ -0.09
VAMP4-203ENST00000474047 GDF9O60383 454 aa14.52□□□□□ -0.09
VAMP4-203ENST00000474047 FSBPO95073 299 aa14.52□□□□□ -0.09
VAMP4-203ENST00000474047 GOT1P17174 413 aa14.52□□□□□ -0.09
VAMP4-203ENST00000474047 ARL4AP40617 200 aa14.52□□□□□ -0.09
VAMP4-203ENST00000474047 SERPINH1P50454 418 aaKnown RBP14.52□□□□□ -0.09
VAMP4-203ENST00000474047 ATXN3P54252 364 aaPredicted RBP14.52□□□□□ -0.09
VAMP4-203ENST00000474047 YBEYP58557 167 aaPredicted RBP14.52□□□□□ -0.09
VAMP4-203ENST00000474047 IRX4P78413 519 aa14.52□□□□□ -0.09
VAMP4-203ENST00000474047 CA9Q16790 459 aa14.52□□□□□ -0.09
VAMP4-203ENST00000474047 HADHQ16836 314 aaKnown RBP14.52□□□□□ -0.09
VAMP4-203ENST00000474047 DAB2IPQ5VWQ8 1189 aa14.52□□□□□ -0.09
VAMP4-203ENST00000474047 C22orf39Q6P5X5 142 aa14.52□□□□□ -0.09
VAMP4-203ENST00000474047 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.52□□□□□ -0.09
VAMP4-203ENST00000474047 RYBPQ8N488 228 aaPredicted RBP14.52□□□□□ -0.09
VAMP4-203ENST00000474047 PIP4K2CQ8TBX8 421 aa14.52□□□□□ -0.09
VAMP4-203ENST00000474047 HSPH1Q92598 858 aa14.52□□□□□ -0.09
VAMP4-203ENST00000474047 PEBP4Q96S96 227 aa14.52□□□□□ -0.09
VAMP4-203ENST00000474047 EDEM2Q9BV94 578 aa14.52□□□□□ -0.09
VAMP4-203ENST00000474047 ACE2Q9BYF1 805 aaPredicted RBP14.52□□□□□ -0.09
VAMP4-203ENST00000474047 NEUROG2Q9H2A3 272 aa14.52□□□□□ -0.09
VAMP4-203ENST00000474047 C6orf106Q9H6K1 298 aaPredicted RBP14.52□□□□□ -0.09
VAMP4-203ENST00000474047 DYRK4Q9NR20 520 aa14.52□□□□□ -0.09
VAMP4-203ENST00000474047 ZNF292O60281 2723 aa14.51□□□□□ -0.09
VAMP4-203ENST00000474047 ZSCAN5CA6NGD5 496 aaPredicted RBP14.51□□□□□ -0.09
VAMP4-203ENST00000474047 H3BRJ5 948 aa14.51□□□□□ -0.09
VAMP4-203ENST00000474047 KDELR3O43731 214 aa14.51□□□□□ -0.09
VAMP4-203ENST00000474047 ZMPSTE24O75844 475 aa14.51□□□□□ -0.09
VAMP4-203ENST00000474047 CHRNA3P32297 505 aa14.51□□□□□ -0.09
VAMP4-203ENST00000474047 ZNF75DP51815 510 aa14.51□□□□□ -0.09
VAMP4-203ENST00000474047 ZNF135P52742 658 aaPredicted RBP14.51□□□□□ -0.09
VAMP4-203ENST00000474047 ARF5P84085 180 aa14.51□□□□□ -0.09
VAMP4-203ENST00000474047 CCDC15Q0P6D6 951 aa14.51□□□□□ -0.09
VAMP4-203ENST00000474047 TBX2Q13207 712 aaPredicted RBP14.51□□□□□ -0.09
VAMP4-203ENST00000474047 SEMA3BQ13214 749 aa14.51□□□□□ -0.09
VAMP4-203ENST00000474047 PUM1Q14671 1186 aaKnown RBP eCLIP14.51□□□□□ -0.09
VAMP4-203ENST00000474047 SMTNL2Q2TAL5 461 aa14.51□□□□□ -0.09
VAMP4-203ENST00000474047 POM121L1PQ3SYA9 428 aa14.51□□□□□ -0.09
VAMP4-203ENST00000474047 PARP15Q460N3 678 aa14.51□□□□□ -0.09
VAMP4-203ENST00000474047 KCNT1Q5JUK3 1230 aa14.51□□□□□ -0.09
VAMP4-203ENST00000474047 LEKR1Q6ZMV7 388 aa14.51□□□□□ -0.09
VAMP4-203ENST00000474047 RFX8Q6ZV50 586 aa14.51□□□□□ -0.09
VAMP4-203ENST00000474047 PCDH20Q8N6Y1 951 aaKnown RBP14.51□□□□□ -0.09
VAMP4-203ENST00000474047 OR14C36Q8NHC7 312 aa14.51□□□□□ -0.09
VAMP4-203ENST00000474047 RMDN1Q96DB5 314 aa14.51□□□□□ -0.09
VAMP4-203ENST00000474047 KCTD15Q96SI1 283 aaPredicted RBP14.51□□□□□ -0.09
VAMP4-203ENST00000474047 CEP44Q9C0F1 390 aa14.51□□□□□ -0.09
VAMP4-203ENST00000474047 SPTLC3Q9NUV7 552 aa14.51□□□□□ -0.09
VAMP4-203ENST00000474047 UVRAGQ9P2Y5 699 aa14.51□□□□□ -0.09
VAMP4-203ENST00000474047 EVLQ9UI08 416 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms