RNA–Protein interactions for RNA: ENST00000473978.5

PCYT1A-214, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-214ENST00000473978 CLDN1O95832 211 aa13.05□□□□□ -0.32
PCYT1A-214ENST00000473978 IGLV3-27P01718 113 aa13.05□□□□□ -0.32
PCYT1A-214ENST00000473978 RPLP0P05388 317 aaKnown RBP13.05□□□□□ -0.32
PCYT1A-214ENST00000473978 CD82P27701 267 aa13.05□□□□□ -0.32
PCYT1A-214ENST00000473978 GRNP28799 593 aaKnown RBP13.05□□□□□ -0.32
PCYT1A-214ENST00000473978 NOS2P35228 1153 aa13.05□□□□□ -0.32
PCYT1A-214ENST00000473978 ADKP55263 362 aaKnown RBP13.05□□□□□ -0.32
PCYT1A-214ENST00000473978 CLDN10P78369 228 aa13.05□□□□□ -0.32
PCYT1A-214ENST00000473978 NFKBIBQ15653 356 aa13.05□□□□□ -0.32
PCYT1A-214ENST00000473978 KRTAP21-3Q3LHN1 58 aa13.05□□□□□ -0.32
PCYT1A-214ENST00000473978 KYAT3Q6YP21 454 aaKnown RBP13.05□□□□□ -0.32
PCYT1A-214ENST00000473978 STXBP4Q6ZWJ1 553 aa13.05□□□□□ -0.32
PCYT1A-214ENST00000473978 PARD3BQ8TEW8 1205 aa13.05□□□□□ -0.32
PCYT1A-214ENST00000473978 NKD1Q969G9 470 aa13.05□□□□□ -0.32
PCYT1A-214ENST00000473978 CCDC74AQ96AQ1 378 aa13.05□□□□□ -0.32
PCYT1A-214ENST00000473978 CPEB1Q9BZB8 566 aaKnown RBP13.05□□□□□ -0.32
PCYT1A-214ENST00000473978 UBXN6Q9BZV1 441 aa13.05□□□□□ -0.32
PCYT1A-214ENST00000473978 CUEDC1Q9NWM3 386 aaPredicted RBP13.05□□□□□ -0.32
PCYT1A-214ENST00000473978 CCDC39Q9UFE4 941 aa13.05□□□□□ -0.32
PCYT1A-214ENST00000473978 VPS4AQ9UN37 437 aa13.05□□□□□ -0.32
PCYT1A-214ENST00000473978 HIVEP1P15822 2718 aa13.04□□□□□ -0.32
PCYT1A-214ENST00000473978 SDK2Q58EX2 2172 aa13.04□□□□□ -0.32
PCYT1A-214ENST00000473978 RAD51BO15315 384 aa13.04□□□□□ -0.32
PCYT1A-214ENST00000473978 LUC7L3O95232 432 aaKnown RBP13.04□□□□□ -0.32
PCYT1A-214ENST00000473978 ASS1P00966 412 aaKnown RBP13.04□□□□□ -0.32
PCYT1A-214ENST00000473978 LIFP15018 202 aa13.04□□□□□ -0.32
PCYT1A-214ENST00000473978 AP3M2P53677 418 aa13.04□□□□□ -0.32
PCYT1A-214ENST00000473978 EIF2B5Q13144 721 aaKnown RBP13.04□□□□□ -0.32
PCYT1A-214ENST00000473978 PDE1CQ14123 709 aaPredicted RBP13.04□□□□□ -0.32
PCYT1A-214ENST00000473978 LACTB2Q53H82 288 aaPredicted RBP13.04□□□□□ -0.32
PCYT1A-214ENST00000473978 PRRT3Q5FWE3 981 aa13.04□□□□□ -0.32
PCYT1A-214ENST00000473978 C1QL3Q5VWW1 255 aa13.04□□□□□ -0.32
PCYT1A-214ENST00000473978 BSPRYQ5W0U4 402 aa13.04□□□□□ -0.32
PCYT1A-214ENST00000473978 ESRP1Q6NXG1 681 aaKnown RBP13.04□□□□□ -0.32
PCYT1A-214ENST00000473978 CCDC117Q8IWD4 279 aaPredicted RBP13.04□□□□□ -0.32
PCYT1A-214ENST00000473978 ZNF507Q8TCN5 953 aa13.04□□□□□ -0.32
PCYT1A-214ENST00000473978 CATSPER2Q96P56 530 aa13.04□□□□□ -0.32
PCYT1A-214ENST00000473978 SPASTQ9UBP0 616 aa13.04□□□□□ -0.32
PCYT1A-214ENST00000473978 GULP1Q9UBP9 304 aa13.04□□□□□ -0.32
PCYT1A-214ENST00000473978 IPO11Q9UI26 975 aaKnown RBP13.04□□□□□ -0.32
PCYT1A-214ENST00000473978 UNC13CQ8NB66 2214 aa13.03□□□□□ -0.32
PCYT1A-214ENST00000473978 TYW5A2RUC4 315 aaKnown RBP13.03□□□□□ -0.32
PCYT1A-214ENST00000473978 WIPF3A6NGB9 483 aa13.03□□□□□ -0.32
PCYT1A-214ENST00000473978 YJEFN3A6XGL0 299 aa13.03□□□□□ -0.32
PCYT1A-214ENST00000473978 E7ENQ6 273 aa13.03□□□□□ -0.32
PCYT1A-214ENST00000473978 LMO7DNF2Z398 122 aa13.03□□□□□ -0.32
PCYT1A-214ENST00000473978 STMND1H3BQB6 276 aa13.03□□□□□ -0.32
PCYT1A-214ENST00000473978 H3BQV1 296 aa13.03□□□□□ -0.32
PCYT1A-214ENST00000473978 TULP2O00295 520 aa13.03□□□□□ -0.32
PCYT1A-214ENST00000473978 MCF2LO15068 1137 aa13.03□□□□□ -0.32
PCYT1A-214ENST00000473978 YY2O15391 372 aa13.03□□□□□ -0.32
PCYT1A-214ENST00000473978 PCDH8O95206 1070 aa13.03□□□□□ -0.32
PCYT1A-214ENST00000473978 ZNF18P17022 549 aa13.03□□□□□ -0.32
PCYT1A-214ENST00000473978 CD58P19256 250 aa13.03□□□□□ -0.32
PCYT1A-214ENST00000473978 NR1D1P20393 614 aa13.03□□□□□ -0.32
PCYT1A-214ENST00000473978 ZFP36L1Q07352 338 aaKnown RBP13.03□□□□□ -0.32
PCYT1A-214ENST00000473978 FGL2Q14314 439 aa13.03□□□□□ -0.32
PCYT1A-214ENST00000473978 TMEM259Q4ZIN3 620 aa13.03□□□□□ -0.32
PCYT1A-214ENST00000473978 ZNF394Q53GI3 561 aa13.03□□□□□ -0.32
PCYT1A-214ENST00000473978 DCAF6Q58WW2 860 aa13.03□□□□□ -0.32
PCYT1A-214ENST00000473978 NUGGCQ68CJ6 796 aa13.03□□□□□ -0.32
PCYT1A-214ENST00000473978 EPM2AIP1Q7L775 607 aaPredicted RBP13.03□□□□□ -0.32
PCYT1A-214ENST00000473978 UNC45BQ8IWX7 931 aa13.03□□□□□ -0.32
PCYT1A-214ENST00000473978 CCDC65Q8IXS2 484 aa13.03□□□□□ -0.32
PCYT1A-214ENST00000473978 TAF4BQ92750 862 aa13.03□□□□□ -0.32
PCYT1A-214ENST00000473978 TMEM159Q96B96 161 aa13.03□□□□□ -0.32
PCYT1A-214ENST00000473978 CLPBQ9H078 707 aa13.03□□□□□ -0.32
PCYT1A-214ENST00000473978 NUCKS1Q9H1E3 243 aaKnown RBP13.03□□□□□ -0.32
PCYT1A-214ENST00000473978 APOBEC3BQ9UH17 382 aaKnown RBP13.03□□□□□ -0.32
PCYT1A-214ENST00000473978 PNMA8BQ9ULN7 279 aaPredicted RBP13.03□□□□□ -0.32
PCYT1A-214ENST00000473978 A0A087X0B3 334 aa13.02□□□□□ -0.33
PCYT1A-214ENST00000473978 EIF3DO15371 548 aaKnown RBP eCLIP13.02□□□□□ -0.33
PCYT1A-214ENST00000473978 NKX2-8O15522 239 aa13.02□□□□□ -0.33
PCYT1A-214ENST00000473978 CD2BP2O95400 341 aaKnown RBP13.02□□□□□ -0.33
PCYT1A-214ENST00000473978 BMP15O95972 392 aa13.02□□□□□ -0.33
PCYT1A-214ENST00000473978 PAK4O96013 591 aaPredicted RBP13.02□□□□□ -0.33
PCYT1A-214ENST00000473978 RPN1P04843 607 aaKnown RBP13.02□□□□□ -0.33
PCYT1A-214ENST00000473978 CTSLP07711 333 aa13.02□□□□□ -0.33
PCYT1A-214ENST00000473978 ANXA6P08133 673 aa13.02□□□□□ -0.33
PCYT1A-214ENST00000473978 GJB2P29033 226 aa13.02□□□□□ -0.33
PCYT1A-214ENST00000473978 RABIFP47224 123 aa13.02□□□□□ -0.33
PCYT1A-214ENST00000473978 ARSDP51689 593 aa13.02□□□□□ -0.33
PCYT1A-214ENST00000473978 DLG4P78352 724 aa13.02□□□□□ -0.33
PCYT1A-214ENST00000473978 ESPL1Q14674 2120 aa13.02□□□□□ -0.33
PCYT1A-214ENST00000473978 ZACNQ401N2 412 aa13.02□□□□□ -0.33
PCYT1A-214ENST00000473978 ACCSLQ4AC99 568 aa13.02□□□□□ -0.33
PCYT1A-214ENST00000473978 MS4A13Q5J8X5 152 aa13.02□□□□□ -0.33
PCYT1A-214ENST00000473978 Q6ZVU0 165 aa13.02□□□□□ -0.33
PCYT1A-214ENST00000473978 HEATR4Q86WZ0 1026 aa13.02□□□□□ -0.33
PCYT1A-214ENST00000473978 NELFCDQ8IXH7 590 aa13.02□□□□□ -0.33
PCYT1A-214ENST00000473978 TEX19Q8NA77 164 aa13.02□□□□□ -0.33
PCYT1A-214ENST00000473978 GALNT11Q8NCW6 608 aa13.02□□□□□ -0.33
PCYT1A-214ENST00000473978 BTN2A2Q8WVV5 523 aa13.02□□□□□ -0.33
PCYT1A-214ENST00000473978 AZIN2Q96A70 460 aa13.02□□□□□ -0.33
PCYT1A-214ENST00000473978 CMKLR1Q99788 373 aa13.02□□□□□ -0.33
PCYT1A-214ENST00000473978 EPAS1Q99814 870 aa13.02□□□□□ -0.33
PCYT1A-214ENST00000473978 LRRC61Q9BV99 259 aa13.02□□□□□ -0.33
PCYT1A-214ENST00000473978 LRRN3Q9H3W5 708 aa13.02□□□□□ -0.33
PCYT1A-214ENST00000473978 APOBEC3GQ9HC16 384 aaKnown RBP13.02□□□□□ -0.33
PCYT1A-214ENST00000473978 ABCC13Q9NSE7 274 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms