RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 KBTBD6Q86V97 674 aa11.15□□□□□ -0.62
C9orf3-214ENST00000473778 KCNMB4Q86W47 210 aa11.15□□□□□ -0.62
C9orf3-214ENST00000473778 MFSD6LQ8IWD5 586 aa11.15□□□□□ -0.62
C9orf3-214ENST00000473778 FBXW8Q8N3Y1 598 aa11.15□□□□□ -0.62
C9orf3-214ENST00000473778 TDRD5Q8NAT2 981 aaKnown RBP11.15□□□□□ -0.62
C9orf3-214ENST00000473778 CMTM5Q96DZ9 223 aa11.15□□□□□ -0.62
C9orf3-214ENST00000473778 UNKQ9C0B0 810 aaKnown RBP11.15□□□□□ -0.62
C9orf3-214ENST00000473778 NMRAL1Q9HBL8 299 aa11.15□□□□□ -0.62
C9orf3-214ENST00000473778 IARS2Q9NSE4 1012 aaKnown RBP11.15□□□□□ -0.62
C9orf3-214ENST00000473778 PCDHGB4Q9UN71 923 aa11.15□□□□□ -0.62
C9orf3-214ENST00000473778 PCDHGB5Q9Y5G0 923 aa11.15□□□□□ -0.62
C9orf3-214ENST00000473778 TIMM13Q9Y5L4 95 aaPredicted RBP11.15□□□□□ -0.62
C9orf3-214ENST00000473778 HUS1O60921 280 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 CD4P01730 458 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 USP17L7P0C7H9 530 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 MYL4P12829 197 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 KCNE1P15382 129 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 SPRP35270 261 aaPredicted RBP11.14□□□□□ -0.63
C9orf3-214ENST00000473778 AVPR1AP37288 418 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 DPP6P42658 865 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 MPP3Q13368 585 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 DGKDQ16760 1214 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 ISLR2Q6UXK2 745 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 ARHGAP36Q6ZRI8 547 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 ANKRD23Q86SG2 305 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 SDCCAG8Q86SQ7 713 aaPredicted RBP11.14□□□□□ -0.63
C9orf3-214ENST00000473778 SPATA6LQ8N4H0 392 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 CNTD1Q8N815 330 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 GDPD5Q8WTR4 605 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 DTNBP1Q96EV8 351 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 CELF6Q96J87 481 aaKnown RBP11.14□□□□□ -0.63
C9orf3-214ENST00000473778 SMOQ99835 787 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 GBA3Q9H227 469 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 LRRC4Q9HBW1 653 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 OXSMQ9NWU1 459 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 ZDHHC7Q9NXF8 308 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 SLC39A10Q9ULF5 831 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 SSX2IPQ9Y2D8 614 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 IPPQ9Y573 584 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 TTC3P53804 2025 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 MYBPHLA2RUH7 354 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 MBLAC1A4D2B0 266 aaPredicted RBP11.14□□□□□ -0.63
C9orf3-214ENST00000473778 MATN2O00339 956 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 TREHO43280 583 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 TRIM13O60858 407 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 CYP2C9P11712 490 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 ARSAP15289 507 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 SAT1P21673 171 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 WARSP23381 471 aaKnown RBP11.14□□□□□ -0.63
C9orf3-214ENST00000473778 TPI1P60174 286 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 PPP2R5DQ14738 602 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 ZRSR2Q15696 482 aaKnown RBP11.14□□□□□ -0.63
C9orf3-214ENST00000473778 LSM12Q3MHD2 195 aaKnown RBP11.14□□□□□ -0.63
C9orf3-214ENST00000473778 OTOP3Q7RTS5 596 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 CENPLQ8N0S6 344 aaPredicted RBP11.14□□□□□ -0.63
C9orf3-214ENST00000473778 SIX6OS1Q8N1H7 587 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 KCTD13Q8WZ19 329 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 EDEM1Q92611 657 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 PPP2R3CQ969Q6 453 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 MAML3Q96JK9 1138 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 TNIP3Q96KP6 325 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 MARK4Q96L34 752 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 ZNF560Q96MR9 790 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 PLEKHG4BQ96PX9 1271 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 C20orf96Q9NUD7 363 aaPredicted RBP11.14□□□□□ -0.63
C9orf3-214ENST00000473778 BFARQ9NZS9 450 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 ZDHHC2Q9UIJ5 367 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 ADAM28Q9UKQ2 775 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 STAP1Q9ULZ2 295 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 TBC1D30Q9Y2I9 924 aa11.14□□□□□ -0.63
C9orf3-214ENST00000473778 FNDC1Q4ZHG4 1894 aaPredicted RBP11.14□□□□□ -0.63
C9orf3-214ENST00000473778 GABRDO14764 452 aa11.13□□□□□ -0.63
C9orf3-214ENST00000473778 AIM2O14862 343 aa11.13□□□□□ -0.63
C9orf3-214ENST00000473778 ZSCAN9O15535 394 aaPredicted RBP11.13□□□□□ -0.63
C9orf3-214ENST00000473778 GRID2O43424 1007 aa11.13□□□□□ -0.63
C9orf3-214ENST00000473778 SLC35E2BP0CK96 405 aa11.13□□□□□ -0.63
C9orf3-214ENST00000473778 NCAM1P13591 858 aa11.13□□□□□ -0.63
C9orf3-214ENST00000473778 GARSP41250 739 aaKnown RBP11.13□□□□□ -0.63
C9orf3-214ENST00000473778 CDK7P50613 346 aa11.13□□□□□ -0.63
C9orf3-214ENST00000473778 DAOAP59103 153 aa11.13□□□□□ -0.63
C9orf3-214ENST00000473778 ADAM17P78536 824 aa11.13□□□□□ -0.63
C9orf3-214ENST00000473778 ARL13AQ5H913 290 aaPredicted RBP11.13□□□□□ -0.63
C9orf3-214ENST00000473778 LSMEM2Q8N112 164 aa11.13□□□□□ -0.63
C9orf3-214ENST00000473778 C3orf58Q8NDZ4 430 aa11.13□□□□□ -0.63
C9orf3-214ENST00000473778 SPATA22Q8NHS9 363 aa11.13□□□□□ -0.63
C9orf3-214ENST00000473778 NPLOC4Q8TAT6 608 aa11.13□□□□□ -0.63
C9orf3-214ENST00000473778 PCED1BQ96HM7 432 aa11.13□□□□□ -0.63
C9orf3-214ENST00000473778 APBA2Q99767 749 aa11.13□□□□□ -0.63
C9orf3-214ENST00000473778 ACE2Q9BYF1 805 aaPredicted RBP11.13□□□□□ -0.63
C9orf3-214ENST00000473778 NUF2Q9BZD4 464 aa11.13□□□□□ -0.63
C9orf3-214ENST00000473778 TCF7L2Q9NQB0 619 aa11.13□□□□□ -0.63
C9orf3-214ENST00000473778 FBXW11Q9UKB1 542 aa11.13□□□□□ -0.63
C9orf3-214ENST00000473778 CDY2AQ9Y6F7 541 aa11.13□□□□□ -0.63
C9orf3-214ENST00000473778 CDY1Q9Y6F8 540 aa11.13□□□□□ -0.63
C9orf3-214ENST00000473778 TMEM233B4DJY2 109 aa11.13□□□□□ -0.63
C9orf3-214ENST00000473778 FBXO21O94952 628 aa11.13□□□□□ -0.63
C9orf3-214ENST00000473778 MT-CYBP00156 380 aaPredicted RBP11.13□□□□□ -0.63
C9orf3-214ENST00000473778 F2P00734 622 aa11.13□□□□□ -0.63
C9orf3-214ENST00000473778 SERPINB6P35237 376 aa11.13□□□□□ -0.63
C9orf3-214ENST00000473778 GRIA4P48058 902 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms