RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 L2HGDHQ9H9P8 463 aa9.31□□□□□ -0.92
SMG5-203ENST00000473643 POLR3BQ9NW08 1133 aaPredicted RBP9.31□□□□□ -0.92
SMG5-203ENST00000473643 KIAA1522Q9P206 1035 aaPredicted RBP9.31□□□□□ -0.92
SMG5-203ENST00000473643 CLEC4EQ9ULY5 219 aa9.31□□□□□ -0.92
SMG5-203ENST00000473643 SMG5Q9UPR3 1016 aaKnown RBP9.31□□□□□ -0.92
SMG5-203ENST00000473643 SLC8A2Q9UPR5 921 aa9.31□□□□□ -0.92
SMG5-203ENST00000473643 SLC27A6Q9Y2P4 619 aa9.31□□□□□ -0.92
SMG5-203ENST00000473643 MFHAS1Q9Y4C4 1052 aa9.31□□□□□ -0.92
SMG5-203ENST00000473643 OR51B4Q9Y5P0 310 aa9.31□□□□□ -0.92
SMG5-203ENST00000473643 FANCMQ8IYD8 2048 aa9.31□□□□□ -0.92
SMG5-203ENST00000473643 ANTXRLA6NF34 631 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 HACD1B0YJ81 288 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.3□□□□□ -0.92
SMG5-203ENST00000473643 RASA4BC9J798 803 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 NEDD8-MDP1E9PL57 170 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 H0Y626 953 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 RASA4O43374 803 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 MFSD11O43934 449 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 RAMP2O60895 175 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 TULP3O75386 442 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 KAT7O95251 611 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 RHOCP08134 193 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 PECAM1P16284 738 aaPredicted RBP9.3□□□□□ -0.92
SMG5-203ENST00000473643 MX2P20592 715 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 TGM1P22735 817 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 ETFBP38117 255 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 TNFRSF4P43489 277 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 KIR2DL1P43626 348 aaPredicted RBP9.3□□□□□ -0.92
SMG5-203ENST00000473643 DYNLT1P63172 113 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 MRPS21P82921 87 aaKnown RBP9.3□□□□□ -0.92
SMG5-203ENST00000473643 GNA12Q03113 381 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 GALNT2Q10471 571 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 CDH18Q13634 790 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 DMC1Q14565 340 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 POLD3Q15054 466 aaPredicted RBP9.3□□□□□ -0.92
SMG5-203ENST00000473643 PDK1Q15118 436 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 FSCBQ5H9T9 825 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 CCDC181Q5TID7 509 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 HEATR6Q6AI08 1181 aaKnown RBP9.3□□□□□ -0.92
SMG5-203ENST00000473643 CCDC117Q8IWD4 279 aaPredicted RBP9.3□□□□□ -0.92
SMG5-203ENST00000473643 CARNMT1Q8N4J0 409 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 DCLK2Q8N568 766 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 C12orf50Q8NA57 414 aaPredicted RBP9.3□□□□□ -0.92
SMG5-203ENST00000473643 OR52K2Q8NGK3 314 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 ACTL9Q8TC94 416 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 WFDC5Q8TCV5 224 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 KCNV2Q8TDN2 545 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 ARHGEF2Q92974 986 aaKnown RBP9.3□□□□□ -0.92
SMG5-203ENST00000473643 FATE1Q969F0 183 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 CAPZA3Q96KX2 299 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 ACE2Q9BYF1 805 aaPredicted RBP9.3□□□□□ -0.92
SMG5-203ENST00000473643 PLK2Q9NYY3 685 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 DEC1Q9P2X7 70 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 EBF1Q9UH73 591 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 DRG1Q9Y295 367 aaKnown RBP9.3□□□□□ -0.92
SMG5-203ENST00000473643 STARD13Q9Y3M8 1113 aa9.3□□□□□ -0.92
SMG5-203ENST00000473643 HELZP42694 1942 aaKnown RBP9.29□□□□□ -0.92
SMG5-203ENST00000473643 A0A0D9SEW6 157 aa9.29□□□□□ -0.92
SMG5-203ENST00000473643 BCLAF3A2AJT9 711 aaKnown RBP9.29□□□□□ -0.92
SMG5-203ENST00000473643 ARHGAP42A6NI28 874 aa9.29□□□□□ -0.92
SMG5-203ENST00000473643 CCDC188H7C350 402 aa9.29□□□□□ -0.92
SMG5-203ENST00000473643 KRIT1O00522 736 aa9.29□□□□□ -0.92
SMG5-203ENST00000473643 KDELR3O43731 214 aa9.29□□□□□ -0.92
SMG5-203ENST00000473643 LIASO43766 372 aa9.29□□□□□ -0.92
SMG5-203ENST00000473643 ZNF189O75820 626 aaPredicted RBP9.29□□□□□ -0.92
SMG5-203ENST00000473643 ZMPSTE24O75844 475 aa9.29□□□□□ -0.92
SMG5-203ENST00000473643 APODP05090 189 aa9.29□□□□□ -0.92
SMG5-203ENST00000473643 RETP07949 1114 aa9.29□□□□□ -0.92
SMG5-203ENST00000473643 CCNCP24863 283 aa9.29□□□□□ -0.92
SMG5-203ENST00000473643 MZF1P28698 734 aaPredicted RBP9.29□□□□□ -0.92
SMG5-203ENST00000473643 HLA-FP30511 346 aa9.29□□□□□ -0.92
SMG5-203ENST00000473643 CD70P32970 193 aa9.29□□□□□ -0.92
SMG5-203ENST00000473643 GARSP41250 739 aaKnown RBP9.29□□□□□ -0.92
SMG5-203ENST00000473643 PXNP49023 591 aaPredicted RBP9.29□□□□□ -0.92
SMG5-203ENST00000473643 PAPOLAP51003 745 aaKnown RBP9.29□□□□□ -0.92
SMG5-203ENST00000473643 OTUD4Q01804 1114 aaKnown RBP9.29□□□□□ -0.92
SMG5-203ENST00000473643 CKAP4Q07065 602 aaKnown RBP9.29□□□□□ -0.92
SMG5-203ENST00000473643 PPIDQ08752 370 aaKnown RBP9.29□□□□□ -0.92
SMG5-203ENST00000473643 LMAN2Q12907 356 aa9.29□□□□□ -0.92
SMG5-203ENST00000473643 SRSF5Q13243 272 aaKnown RBP9.29□□□□□ -0.92
SMG5-203ENST00000473643 SERINC3Q13530 473 aa9.29□□□□□ -0.92
SMG5-203ENST00000473643 SIM2Q14190 667 aaPredicted RBP9.29□□□□□ -0.92
SMG5-203ENST00000473643 OASLQ15646 514 aaKnown RBP9.29□□□□□ -0.92
SMG5-203ENST00000473643 PLEKHG6Q3KR16 790 aa9.29□□□□□ -0.92
SMG5-203ENST00000473643 HSF5Q4G112 596 aaPredicted RBP9.29□□□□□ -0.92
SMG5-203ENST00000473643 PREPLQ4J6C6 727 aaPredicted RBP9.29□□□□□ -0.92
SMG5-203ENST00000473643 C2orf27AQ580R0 203 aa9.29□□□□□ -0.92
SMG5-203ENST00000473643 DNTTIP2Q5QJE6 756 aaKnown RBP9.29□□□□□ -0.92
SMG5-203ENST00000473643 EMC10Q5UCC4 262 aa9.29□□□□□ -0.92
SMG5-203ENST00000473643 RNF219Q5W0B1 726 aaPredicted RBP9.29□□□□□ -0.92
SMG5-203ENST00000473643 LAIR1Q6GTX8 287 aa9.29□□□□□ -0.92
SMG5-203ENST00000473643 NPNTQ6UXI9 565 aa9.29□□□□□ -0.92
SMG5-203ENST00000473643 SFTPA1Q8IWL2 248 aa9.29□□□□□ -0.92
SMG5-203ENST00000473643 TP53INP2Q8IXH6 220 aa9.29□□□□□ -0.92
SMG5-203ENST00000473643 GPR161Q8N6U8 529 aaKnown RBP9.29□□□□□ -0.92
SMG5-203ENST00000473643 NAT16Q8N8M0 369 aa9.29□□□□□ -0.92
SMG5-203ENST00000473643 SPATA4Q8NEY3 305 aa9.29□□□□□ -0.92
SMG5-203ENST00000473643 BHMTQ93088 406 aa9.29□□□□□ -0.92
SMG5-203ENST00000473643 TTC17Q96AE7 1141 aa9.29□□□□□ -0.92
SMG5-203ENST00000473643 ACDQ96AP0 544 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms