RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 HSFY1Q96LI6 401 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 SERPINB11Q96P15 392 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 NOX5Q96PH1 765 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 UBL7Q96S82 380 aaPredicted RBP9.34□□□□□ -0.91
SF3A1-206ENST00000471037 PCDHB18PQ96TA0 734 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 ZSWIM1Q9BR11 485 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 DESI2Q9BSY9 194 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 NEUROG2Q9H2A3 272 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 GDF3Q9NR23 364 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 STIM2Q9P246 746 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 INTUQ9ULD6 942 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 PYCARDQ9ULZ3 195 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 TLR6Q9Y2C9 796 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 PCDHA13Q9Y5I0 950 aa9.34□□□□□ -0.91
SF3A1-206ENST00000471037 TP53BP1Q12888 1972 aaPredicted RBP9.33□□□□□ -0.92
SF3A1-206ENST00000471037 GOLGA6L9A6NEM1 432 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 FAM47DPA6NHR8 397 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 EIF4E1BA6NMX2 242 aaKnown RBP9.33□□□□□ -0.92
SF3A1-206ENST00000471037 SART1O43290 800 aaKnown RBP9.33□□□□□ -0.92
SF3A1-206ENST00000471037 LATO43561 262 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 LUC7L3O95232 432 aaKnown RBP9.33□□□□□ -0.92
SF3A1-206ENST00000471037 MOCS3O95396 460 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 LDOC1O95751 146 aaPredicted RBP9.33□□□□□ -0.92
SF3A1-206ENST00000471037 ADH1BP00325 375 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 FYNP06241 537 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 ITGAVP06756 1048 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 H2AFZP0C0S5 128 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 JUPP14923 745 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 GOT1P17174 413 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 ABCB4P21439 1286 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 C5AR1P21730 350 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 SLC8A1P32418 973 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 EIF2S3P41091 472 aaKnown RBP9.33□□□□□ -0.92
SF3A1-206ENST00000471037 MAGEA1P43355 309 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 NSFP46459 744 aaKnown RBP9.33□□□□□ -0.92
SF3A1-206ENST00000471037 RPL34P49207 117 aaKnown RBP9.33□□□□□ -0.92
SF3A1-206ENST00000471037 ARRB1P49407 418 aaPredicted RBP9.33□□□□□ -0.92
SF3A1-206ENST00000471037 RGS7P49802 495 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 VAV2P52735 878 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 ADPRHP54922 357 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 NXPH1P58417 271 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 DNAJC3Q13217 504 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 RTP5Q14D33 572 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 FSCBQ5H9T9 825 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 PRAMEF14Q5SWL7 426 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 ACAD10Q6JQN1 1059 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 DENND1BQ6P3S1 775 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 ZNF662Q6ZS27 426 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 H2AFVQ71UI9 128 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 SND1Q7KZF4 910 aaKnown RBP eCLIP9.33□□□□□ -0.92
SF3A1-206ENST00000471037 BEND5Q7L4P6 421 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 KIAA1328Q86T90 577 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 PHF13Q86YI8 300 aaPredicted RBP9.33□□□□□ -0.92
SF3A1-206ENST00000471037 PASD1Q8IV76 773 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 MMAAQ8IVH4 418 aaKnown RBP9.33□□□□□ -0.92
SF3A1-206ENST00000471037 CCDC117Q8IWD4 279 aaPredicted RBP9.33□□□□□ -0.92
SF3A1-206ENST00000471037 CARNMT1Q8N4J0 409 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 OXR1Q8N573 874 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 AADATQ8N5Z0 425 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 KIAA1524Q8TCG1 905 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 DQX1Q8TE96 717 aaKnown RBP9.33□□□□□ -0.92
SF3A1-206ENST00000471037 GANCQ8TET4 914 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 CLEC4CQ8WTT0 213 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 STK32AQ8WU08 396 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 TSC1Q92574 1164 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 MYEOVQ96EZ4 313 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 TRIM11Q96F44 468 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 VCPIP1Q96JH7 1222 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 FAM129BQ96TA1 746 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 OMDQ99983 421 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 TSGA10Q9BZW7 698 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 NRSN2Q9GZP1 204 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 MIS12Q9H081 205 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 ISCUQ9H1K1 167 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 ERVMER34-1Q9H9K5 563 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 AASDHPPTQ9NRN7 309 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 KCND1Q9NSA2 647 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 ERVW-1Q9UQF0 538 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 PPP2R2CQ9Y2T4 447 aa9.33□□□□□ -0.92
SF3A1-206ENST00000471037 REXO2Q9Y3B8 237 aaKnown RBP9.33□□□□□ -0.92
SF3A1-206ENST00000471037 GCN1Q92616 2671 aaKnown RBP9.32□□□□□ -0.92
SF3A1-206ENST00000471037 NYNRINQ9P2P1 1898 aaKnown RBP9.32□□□□□ -0.92
SF3A1-206ENST00000471037 ANKRD62A6NC57 917 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 TMCO5BA8MYB1 307 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 TTC34A8MYJ7 566 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 TK2O00142 265 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 CBX4O00257 560 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 PIK3R2O00459 728 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 WNT9AO14904 365 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 PJA2O43164 708 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 FTLP02792 175 aaPredicted RBP9.32□□□□□ -0.92
SF3A1-206ENST00000471037 CALB1P05937 261 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 MYBL1P10243 752 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 MMP8P22894 467 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 CTSOP43234 321 aaPredicted RBP9.32□□□□□ -0.92
SF3A1-206ENST00000471037 GPD2P43304 727 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 RXRGP48443 463 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 PSMD8P48556 350 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 SNX16P57768 344 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 ECT2LQ008S8 904 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms