RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 RAB6CQ53S08 254 aa16.7■□□□□ 0.26
COL9A3-208ENST00000469802 MANEALQ5VSG8 457 aa16.7■□□□□ 0.26
COL9A3-208ENST00000469802 APTXQ7Z2E3 356 aaKnown RBP16.7■□□□□ 0.26
COL9A3-208ENST00000469802 OR2A12Q8NGT7 310 aa16.7■□□□□ 0.26
COL9A3-208ENST00000469802 C11orf70Q9BRQ4 267 aa16.7■□□□□ 0.26
COL9A3-208ENST00000469802 RAB6CQ9H0N0 254 aa16.7■□□□□ 0.26
COL9A3-208ENST00000469802 ANO10Q9NW15 660 aa16.7■□□□□ 0.26
COL9A3-208ENST00000469802 PPARGC1AQ9UBK2 798 aaKnown RBP16.7■□□□□ 0.26
COL9A3-208ENST00000469802 NEU3Q9UQ49 428 aa16.7■□□□□ 0.26
COL9A3-208ENST00000469802 DMXL2Q8TDJ6 3036 aa16.7■□□□□ 0.26
COL9A3-208ENST00000469802 ARID1BQ8NFD5 2236 aaPredicted RBP16.7■□□□□ 0.26
COL9A3-208ENST00000469802 TRPM6Q9BX84 2022 aa16.69■□□□□ 0.26
COL9A3-208ENST00000469802 ILVBLA1L0T0 632 aa16.69■□□□□ 0.26
COL9A3-208ENST00000469802 LRRC10BA6NIK2 292 aa16.69■□□□□ 0.26
COL9A3-208ENST00000469802 C2CD4BA6NLJ0 364 aa16.69■□□□□ 0.26
COL9A3-208ENST00000469802 K7ERQ8 282 aa16.69■□□□□ 0.26
COL9A3-208ENST00000469802 SMAD6O43541 496 aaKnown RBP16.69■□□□□ 0.26
COL9A3-208ENST00000469802 ZMPSTE24O75844 475 aa16.69■□□□□ 0.26
COL9A3-208ENST00000469802 CAPNS1P04632 268 aa16.69■□□□□ 0.26
COL9A3-208ENST00000469802 GLDCP23378 1020 aa16.69■□□□□ 0.26
COL9A3-208ENST00000469802 RRM1P23921 792 aa16.69■□□□□ 0.26
COL9A3-208ENST00000469802 OR1E1P30953 314 aa16.69■□□□□ 0.26
COL9A3-208ENST00000469802 NUDT1P36639 197 aa16.69■□□□□ 0.26
COL9A3-208ENST00000469802 GRK6P43250 576 aa16.69■□□□□ 0.26
COL9A3-208ENST00000469802 PTPN9P43378 593 aa16.69■□□□□ 0.26
COL9A3-208ENST00000469802 TAS2R38P59533 333 aa16.69■□□□□ 0.26
COL9A3-208ENST00000469802 NCAPHQ15003 741 aa16.69■□□□□ 0.26
COL9A3-208ENST00000469802 SHBQ15464 509 aa16.69■□□□□ 0.26
COL9A3-208ENST00000469802 PIP5KL1Q5T9C9 394 aa16.69■□□□□ 0.26
COL9A3-208ENST00000469802 NAPEPLDQ6IQ20 393 aa16.69■□□□□ 0.26
COL9A3-208ENST00000469802 C22orf39Q6P5X5 142 aa16.69■□□□□ 0.26
COL9A3-208ENST00000469802 ATP11CQ8NB49 1132 aa16.69■□□□□ 0.26
COL9A3-208ENST00000469802 OR7D4Q8NG98 312 aa16.69■□□□□ 0.26
COL9A3-208ENST00000469802 JOSD2Q8TAC2 188 aa16.69■□□□□ 0.26
COL9A3-208ENST00000469802 SLC30A5Q8TAD4 765 aa16.69■□□□□ 0.26
COL9A3-208ENST00000469802 RHBDD1Q8TEB9 315 aa16.69■□□□□ 0.26
COL9A3-208ENST00000469802 SKA1Q96BD8 255 aa16.69■□□□□ 0.26
COL9A3-208ENST00000469802 SERAC1Q96JX3 654 aa16.69■□□□□ 0.26
COL9A3-208ENST00000469802 ERGIC2Q96RQ1 377 aa16.69■□□□□ 0.26
COL9A3-208ENST00000469802 PCDHB18PQ96TA0 734 aa16.69■□□□□ 0.26
COL9A3-208ENST00000469802 ELF4Q99607 663 aaPredicted RBP16.69■□□□□ 0.26
COL9A3-208ENST00000469802 ZYG11BQ9C0D3 744 aa16.69■□□□□ 0.26
COL9A3-208ENST00000469802 AASDHPPTQ9NRN7 309 aa16.69■□□□□ 0.26
COL9A3-208ENST00000469802 TBC1D3DA0A087WVF3 549 aa16.68■□□□□ 0.26
COL9A3-208ENST00000469802 TBC1D3IA0A087WXS9 549 aa16.68■□□□□ 0.26
COL9A3-208ENST00000469802 TBC1D3EA0A087X179 549 aa16.68■□□□□ 0.26
COL9A3-208ENST00000469802 TBC1D3KA0A087X1G2 549 aa16.68■□□□□ 0.26
COL9A3-208ENST00000469802 TBC1D3FA6NER0 549 aaPredicted RBP16.68■□□□□ 0.26
COL9A3-208ENST00000469802 TBC1D3LB9A6J9 549 aa16.68■□□□□ 0.26
COL9A3-208ENST00000469802 ZNF821O75541 412 aaPredicted RBP16.68■□□□□ 0.26
COL9A3-208ENST00000469802 ATXN1LP0C7T5 689 aaKnown RBP16.68■□□□□ 0.26
COL9A3-208ENST00000469802 TBC1D3HP0C7X1 549 aa16.68■□□□□ 0.26
COL9A3-208ENST00000469802 SDC4P31431 198 aa16.68■□□□□ 0.26
COL9A3-208ENST00000469802 STAT1P42224 750 aa16.68■□□□□ 0.26
COL9A3-208ENST00000469802 NXPH1P58417 271 aa16.68■□□□□ 0.26
COL9A3-208ENST00000469802 ATP11AP98196 1134 aa16.68■□□□□ 0.26
COL9A3-208ENST00000469802 IL9RQ01113 521 aa16.68■□□□□ 0.26
COL9A3-208ENST00000469802 C15orf59Q2T9L4 293 aaPredicted RBP16.68■□□□□ 0.26
COL9A3-208ENST00000469802 POM121L1PQ3SYA9 428 aa16.68■□□□□ 0.26
COL9A3-208ENST00000469802 CCDC14Q49A88 953 aa16.68■□□□□ 0.26
COL9A3-208ENST00000469802 TBC1D3GQ6DHY5 549 aa16.68■□□□□ 0.26
COL9A3-208ENST00000469802 TBC1D3CQ6IPX1 549 aa16.68■□□□□ 0.26
COL9A3-208ENST00000469802 SASS6Q6UVJ0 657 aa16.68■□□□□ 0.26
COL9A3-208ENST00000469802 LINGO4Q6UY18 593 aa16.68■□□□□ 0.26
COL9A3-208ENST00000469802 STRADAQ7RTN6 431 aa16.68■□□□□ 0.26
COL9A3-208ENST00000469802 PHF13Q86YI8 300 aaPredicted RBP16.68■□□□□ 0.26
COL9A3-208ENST00000469802 TBC1D3Q8IZP1 549 aaPredicted RBP16.68■□□□□ 0.26
COL9A3-208ENST00000469802 TMIEQ8NEW7 156 aa16.68■□□□□ 0.26
COL9A3-208ENST00000469802 RXFP2Q8WXD0 754 aa16.68■□□□□ 0.26
COL9A3-208ENST00000469802 ZCCHC14Q8WYQ9 949 aaKnown RBP16.68■□□□□ 0.26
COL9A3-208ENST00000469802 CENPIQ92674 756 aaPredicted RBP16.68■□□□□ 0.26
COL9A3-208ENST00000469802 PREBQ9HCU5 417 aa16.68■□□□□ 0.26
COL9A3-208ENST00000469802 DMTF1Q9Y222 760 aa16.68■□□□□ 0.26
COL9A3-208ENST00000469802 CXorf51AA0A1B0GTR3 108 aa16.67■□□□□ 0.26
COL9A3-208ENST00000469802 RNF103O00237 685 aa16.67■□□□□ 0.26
COL9A3-208ENST00000469802 YKT6O15498 198 aa16.67■□□□□ 0.26
COL9A3-208ENST00000469802 TNFSF14O43557 240 aa16.67■□□□□ 0.26
COL9A3-208ENST00000469802 SRGAP2O75044 1071 aa16.67■□□□□ 0.26
COL9A3-208ENST00000469802 GJB6O95452 261 aa16.67■□□□□ 0.26
COL9A3-208ENST00000469802 CHRNA3P32297 505 aa16.67■□□□□ 0.26
COL9A3-208ENST00000469802 ADRA1BP35368 520 aa16.67■□□□□ 0.26
COL9A3-208ENST00000469802 SERPINH1P50454 418 aaKnown RBP16.67■□□□□ 0.26
COL9A3-208ENST00000469802 ARF5P84085 180 aa16.67■□□□□ 0.26
COL9A3-208ENST00000469802 GNA12Q03113 381 aa16.67■□□□□ 0.26
COL9A3-208ENST00000469802 CDO1Q16878 200 aa16.67■□□□□ 0.26
COL9A3-208ENST00000469802 CLEC16AQ2KHT3 1053 aa16.67■□□□□ 0.26
COL9A3-208ENST00000469802 INAVAQ3KP66 663 aa16.67■□□□□ 0.26
COL9A3-208ENST00000469802 CCNI2Q6ZMN8 369 aaPredicted RBP16.67■□□□□ 0.26
COL9A3-208ENST00000469802 IQCHQ86VS3 1027 aa16.67■□□□□ 0.26
COL9A3-208ENST00000469802 MFSD2AQ8NA29 543 aa16.67■□□□□ 0.26
COL9A3-208ENST00000469802 CHST14Q8NCH0 376 aa16.67■□□□□ 0.26
COL9A3-208ENST00000469802 ANKRD20A12PQ8NF67 263 aa16.67■□□□□ 0.26
COL9A3-208ENST00000469802 NEK11Q8NG66 645 aa16.67■□□□□ 0.26
COL9A3-208ENST00000469802 SAP25Q8TEE9 199 aa16.67■□□□□ 0.26
COL9A3-208ENST00000469802 ARRDC3Q96B67 414 aa16.67■□□□□ 0.26
COL9A3-208ENST00000469802 CCDC114Q96M63 670 aa16.67■□□□□ 0.26
COL9A3-208ENST00000469802 CEP44Q9C0F1 390 aa16.67■□□□□ 0.26
COL9A3-208ENST00000469802 ERVMER34-1Q9H9K5 563 aa16.67■□□□□ 0.26
COL9A3-208ENST00000469802 GDF3Q9NR23 364 aa16.67■□□□□ 0.26
COL9A3-208ENST00000469802 ANKRD11Q6UB99 2663 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms