RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 TMEM9BQ9NQ34 198 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 DNAJB4Q9UDY4 337 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 PIAS3Q9Y6X2 628 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 ZNF462Q96JM2 2506 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 K7ESF4 209 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 ZNF197O14709 1029 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 ALOX15P16050 662 aaPredicted RBP5.18□□□□□ -1.58
VPS8-219ENST00000469479 MX1P20591 662 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 ITPKBP27987 946 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 DPP6P42658 865 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 GPC3P51654 580 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 CLCN3P51790 818 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 OCRLQ01968 901 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 TROAPQ12815 778 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 LMAN2Q12907 356 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 TRDNQ13061 729 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 SP140Q13342 867 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 TRIM25Q14258 630 aaKnown RBP5.18□□□□□ -1.58
VPS8-219ENST00000469479 PCBP1Q15365 356 aaKnown RBP eCLIP5.18□□□□□ -1.58
VPS8-219ENST00000469479 KLHL22Q53GT1 634 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 MTX3Q5HYI7 312 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 KAZNQ674X7 775 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 FCRLBQ6BAA4 426 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 USP17L6PQ6QN14 398 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 CATIPQ7Z7H3 387 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 MRPL10Q7Z7H8 261 aaKnown RBP5.18□□□□□ -1.58
VPS8-219ENST00000469479 PALB2Q86YC2 1186 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 EXOC8Q8IYI6 725 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 NXPE1Q8N323 547 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 CAMKK1Q8N5S9 505 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 LINC01465Q8N7H1 131 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 CSGALNACT1Q8TDX6 532 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 JPH2Q9BR39 696 aaPredicted RBP5.18□□□□□ -1.58
VPS8-219ENST00000469479 ADGRE3Q9BY15 652 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 DCTPP1Q9H773 170 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 BCO1Q9HAY6 547 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 ZFP14Q9HCL3 533 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 NRBP2Q9NSY0 501 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 TBC1D22BQ9NU19 505 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 FBXW11Q9UKB1 542 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 PIN4Q9Y237 131 aaKnown RBP5.18□□□□□ -1.58
VPS8-219ENST00000469479 WNT6Q9Y6F9 365 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 C2orf16Q68DN1 1984 aa5.18□□□□□ -1.58
VPS8-219ENST00000469479 SF3B1O75533 1304 aaKnown RBP eCLIP5.18□□□□□ -1.58
VPS8-219ENST00000469479 USP9XQ93008 2570 aaPredicted RBP5.17□□□□□ -1.58
VPS8-219ENST00000469479 DOCK8Q8NF50 2099 aa5.17□□□□□ -1.58
VPS8-219ENST00000469479 C4orf47A7E2U8 309 aa5.17□□□□□ -1.58
VPS8-219ENST00000469479 YY2O15391 372 aa5.17□□□□□ -1.58
VPS8-219ENST00000469479 MPPED1O15442 326 aa5.17□□□□□ -1.58
VPS8-219ENST00000469479 RFPL3O75679 317 aa5.17□□□□□ -1.58
VPS8-219ENST00000469479 CHRNB1P11230 501 aa5.17□□□□□ -1.58
VPS8-219ENST00000469479 PSMC3P17980 439 aa5.17□□□□□ -1.58
VPS8-219ENST00000469479 OR1G1P47890 313 aa5.17□□□□□ -1.58
VPS8-219ENST00000469479 EXOSC10Q01780 885 aaKnown RBP5.17□□□□□ -1.58
VPS8-219ENST00000469479 NCBP1Q09161 790 aaKnown RBP5.17□□□□□ -1.58
VPS8-219ENST00000469479 SLC10A2Q12908 348 aaPredicted RBP5.17□□□□□ -1.58
VPS8-219ENST00000469479 ELAVL2Q12926 359 aaKnown RBP5.17□□□□□ -1.58
VPS8-219ENST00000469479 LLGL1Q15334 1064 aa5.17□□□□□ -1.58
VPS8-219ENST00000469479 MST1LQ2TV78 715 aa5.17□□□□□ -1.58
VPS8-219ENST00000469479 SWSAP1Q6NVH7 229 aa5.17□□□□□ -1.58
VPS8-219ENST00000469479 CATSPER4Q7RTX7 472 aa5.17□□□□□ -1.58
VPS8-219ENST00000469479 RALGPS2Q86X27 583 aaPredicted RBP5.17□□□□□ -1.58
VPS8-219ENST00000469479 CCDC60Q8IWA6 550 aaPredicted RBP5.17□□□□□ -1.58
VPS8-219ENST00000469479 LEMD2Q8NC56 503 aa5.17□□□□□ -1.58
VPS8-219ENST00000469479 OR7D4Q8NG98 312 aa5.17□□□□□ -1.58
VPS8-219ENST00000469479 CTCFLQ8NI51 663 aaPredicted RBP5.17□□□□□ -1.58
VPS8-219ENST00000469479 EXOC4Q96A65 974 aa5.17□□□□□ -1.58
VPS8-219ENST00000469479 CCDC51Q96ER9 411 aa5.17□□□□□ -1.58
VPS8-219ENST00000469479 MRI1Q9BV20 369 aa5.17□□□□□ -1.58
VPS8-219ENST00000469479 GPR88Q9GZN0 384 aa5.17□□□□□ -1.58
VPS8-219ENST00000469479 AGO4Q9HCK5 861 aaKnown RBP5.17□□□□□ -1.58
VPS8-219ENST00000469479 ADAM28Q9UKQ2 775 aa5.17□□□□□ -1.58
VPS8-219ENST00000469479 PRG3Q9Y2Y8 225 aaPredicted RBP5.17□□□□□ -1.58
VPS8-219ENST00000469479 PCDHB2Q9Y5E7 798 aa5.17□□□□□ -1.58
VPS8-219ENST00000469479 PCDHA10Q9Y5I2 948 aa5.17□□□□□ -1.58
VPS8-219ENST00000469479 F5P12259 2224 aa5.17□□□□□ -1.58
VPS8-219ENST00000469479 MYH6P13533 1939 aa5.17□□□□□ -1.58
VPS8-219ENST00000469479 PIEZO2Q9H5I5 2752 aa5.16□□□□□ -1.58
VPS8-219ENST00000469479 A0A0D9SFI3 127 aa5.16□□□□□ -1.58
VPS8-219ENST00000469479 LNP1A1A4G5 178 aa5.16□□□□□ -1.58
VPS8-219ENST00000469479 BCLAF3A2AJT9 711 aaKnown RBP5.16□□□□□ -1.58
VPS8-219ENST00000469479 SHISA7A6NL88 538 aa5.16□□□□□ -1.58
VPS8-219ENST00000469479 HIP1O00291 1037 aa5.16□□□□□ -1.58
VPS8-219ENST00000469479 IPO5O00410 1097 aaKnown RBP5.16□□□□□ -1.58
VPS8-219ENST00000469479 ZNF263O14978 683 aa5.16□□□□□ -1.58
VPS8-219ENST00000469479 CYTH3O43739 400 aa5.16□□□□□ -1.58
VPS8-219ENST00000469479 DDHD2O94830 711 aa5.16□□□□□ -1.58
VPS8-219ENST00000469479 CAVIN2O95810 425 aa5.16□□□□□ -1.58
VPS8-219ENST00000469479 CCNE2O96020 404 aa5.16□□□□□ -1.58
VPS8-219ENST00000469479 NCLP19338 710 aaKnown RBP5.16□□□□□ -1.58
VPS8-219ENST00000469479 GRIA3P42263 894 aa5.16□□□□□ -1.58
VPS8-219ENST00000469479 SETQ01105 290 aaPredicted RBP5.16□□□□□ -1.58
VPS8-219ENST00000469479 DSC1Q08554 894 aa5.16□□□□□ -1.58
VPS8-219ENST00000469479 SRSF5Q13243 272 aaKnown RBP5.16□□□□□ -1.58
VPS8-219ENST00000469479 ITGB3BPQ13352 177 aaPredicted RBP5.16□□□□□ -1.58
VPS8-219ENST00000469479 TERF2Q15554 542 aa5.16□□□□□ -1.58
VPS8-219ENST00000469479 COL28A1Q2UY09 1125 aa5.16□□□□□ -1.58
VPS8-219ENST00000469479 PLK5Q496M5 336 aa5.16□□□□□ -1.58
VPS8-219ENST00000469479 TSTD2Q5T7W7 516 aa5.16□□□□□ -1.58
VPS8-219ENST00000469479 FUT10Q6P4F1 479 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms