RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 SLC30A4O14863 429 aa11.44□□□□□ -0.58
COL4A6-205ENST00000468338 TM4SF5O14894 197 aa11.44□□□□□ -0.58
COL4A6-205ENST00000468338 GDF9O60383 454 aa11.44□□□□□ -0.58
COL4A6-205ENST00000468338 SIN3BO75182 1162 aa11.44□□□□□ -0.58
COL4A6-205ENST00000468338 GYPCP04921 128 aa11.44□□□□□ -0.58
COL4A6-205ENST00000468338 SKILP12757 684 aa11.44□□□□□ -0.58
COL4A6-205ENST00000468338 HNRNPH3P31942 346 aaKnown RBP11.44□□□□□ -0.58
COL4A6-205ENST00000468338 RPIAP49247 311 aa11.44□□□□□ -0.58
COL4A6-205ENST00000468338 DHPSP49366 369 aaPredicted RBP11.44□□□□□ -0.58
COL4A6-205ENST00000468338 STK19P49842 368 aaPredicted RBP11.44□□□□□ -0.58
COL4A6-205ENST00000468338 ST8SIA6P61647 398 aa11.44□□□□□ -0.58
COL4A6-205ENST00000468338 OGDHQ02218 1023 aa11.44□□□□□ -0.58
COL4A6-205ENST00000468338 KLHL30Q0D2K2 578 aa11.44□□□□□ -0.58
COL4A6-205ENST00000468338 NAA30Q147X3 362 aaPredicted RBP11.44□□□□□ -0.58
COL4A6-205ENST00000468338 NFKBIBQ15653 356 aa11.44□□□□□ -0.58
COL4A6-205ENST00000468338 CCDC6Q16204 474 aa11.44□□□□□ -0.58
COL4A6-205ENST00000468338 RSPO4Q2I0M5 234 aaPredicted RBP11.44□□□□□ -0.58
COL4A6-205ENST00000468338 ARL13BQ3SXY8 428 aa11.44□□□□□ -0.58
COL4A6-205ENST00000468338 LYSMD4Q5XG99 296 aa11.44□□□□□ -0.58
COL4A6-205ENST00000468338 ZNF783Q6ZMS7 281 aa11.44□□□□□ -0.58
COL4A6-205ENST00000468338 CYP2U1Q7Z449 544 aa11.44□□□□□ -0.58
COL4A6-205ENST00000468338 NLRP14Q86W24 1093 aa11.44□□□□□ -0.58
COL4A6-205ENST00000468338 CADM4Q8NFZ8 388 aa11.44□□□□□ -0.58
COL4A6-205ENST00000468338 DNASE2BQ8WZ79 361 aa11.44□□□□□ -0.58
COL4A6-205ENST00000468338 RPL10LQ96L21 214 aaKnown RBP11.44□□□□□ -0.58
COL4A6-205ENST00000468338 CDK15Q96Q40 435 aa11.44□□□□□ -0.58
COL4A6-205ENST00000468338 PSMB7Q99436 277 aa11.44□□□□□ -0.58
COL4A6-205ENST00000468338 CNPY3Q9BT09 278 aa11.44□□□□□ -0.58
COL4A6-205ENST00000468338 PCED1AQ9H1Q7 454 aa11.44□□□□□ -0.58
COL4A6-205ENST00000468338 SMOC1Q9H4F8 434 aa11.44□□□□□ -0.58
COL4A6-205ENST00000468338 MPP6Q9NZW5 540 aa11.44□□□□□ -0.58
COL4A6-205ENST00000468338 OR12D3Q9UGF7 316 aa11.44□□□□□ -0.58
COL4A6-205ENST00000468338 HS3ST2Q9Y278 367 aa11.44□□□□□ -0.58
COL4A6-205ENST00000468338 NYNRINQ9P2P1 1898 aaKnown RBP11.43□□□□□ -0.58
COL4A6-205ENST00000468338 EDDM13A0A1B0GTR0 161 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 CXorf51AA0A1B0GTR3 108 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 TMEM191CA6NGB0 347 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 PCNX2A6NKB5 2137 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 FAM72CH0Y354 149 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 CCP110O43303 1012 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 RTN2O75298 545 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 LRIG2O94898 1065 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 FTLP02792 175 aaPredicted RBP11.43□□□□□ -0.58
COL4A6-205ENST00000468338 ITPKAP23677 461 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 L1CAMP32004 1257 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 AIF1P55008 147 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 SEMA3BQ13214 749 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 C6orf118Q5T5N4 469 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 FAM72AQ5TYM5 149 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 RNF219Q5W0B1 726 aaPredicted RBP11.43□□□□□ -0.58
COL4A6-205ENST00000468338 ZNF776Q68DI1 518 aaPredicted RBP11.43□□□□□ -0.58
COL4A6-205ENST00000468338 TCEAL6Q6IPX3 200 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 FAM72DQ6L9T8 149 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 SLC23A3Q6PIS1 610 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 CAPN12Q6ZSI9 719 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 USP30Q70CQ3 517 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 FAM72BQ86X60 149 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 CCDC185Q8N715 623 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 DCAF4L2Q8NA75 395 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 FNIP1Q8TF40 1166 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 PIGKQ92643 395 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 TCEAL3Q969E4 200 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 FAM131CQ96AQ9 280 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 MCEEQ96PE7 176 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 RTKNQ9BST9 563 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 MAGEB5Q9BZ81 275 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 ZYG11BQ9C0D3 744 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 XPO4Q9C0E2 1151 aaKnown RBP11.43□□□□□ -0.58
COL4A6-205ENST00000468338 TSPY26PQ9H489 355 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 PARVAQ9NVD7 372 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 SCML1Q9UN30 329 aa11.43□□□□□ -0.58
COL4A6-205ENST00000468338 CABIN1Q9Y6J0 2220 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 PCDH15Q96QU1 1955 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 A0A0D9SEW6 157 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.42□□□□□ -0.58
COL4A6-205ENST00000468338 LNP1A1A4G5 178 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 METTL12A8MUP2 240 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 TMCO5BA8MYB1 307 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 PATE3B3GLJ2 98 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 KHNYNO15037 678 aaKnown RBP11.42□□□□□ -0.58
COL4A6-205ENST00000468338 SRGAP2O75044 1071 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 NDUFS2O75306 463 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 ZMPSTE24O75844 475 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 MT-CO1P00395 513 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 SERPING1P05155 500 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 RHOCP08134 193 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 PLEKP08567 350 aaPredicted RBP11.42□□□□□ -0.58
COL4A6-205ENST00000468338 ACADMP11310 421 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 RHOQP17081 205 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 OR1E1P30953 314 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 NNMTP40261 264 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 IRX4P78413 519 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 ZNF252P-AS1Q0IIN9 211 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 ELAVL3Q14576 367 aaKnown RBP11.42□□□□□ -0.58
COL4A6-205ENST00000468338 DCUN1D2Q6PH85 259 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 ARMCX6Q7L4S7 300 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 ERMP1Q7Z2K6 904 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 TFAP2DQ7Z6R9 452 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 DNAAF5Q86Y56 855 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 DRC7Q8IY82 874 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms