RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 INO80DQ53TQ3 878 aaPredicted RBP20.45■□□□□ 0.86
NPHP4-206ENST00000468253 TXNRD3NBQ6F5E7 133 aa20.45■□□□□ 0.86
NPHP4-206ENST00000468253 USP30Q70CQ3 517 aa20.45■□□□□ 0.86
NPHP4-206ENST00000468253 LPCAT2Q7L5N7 544 aa20.45■□□□□ 0.86
NPHP4-206ENST00000468253 DSG4Q86SJ6 1040 aa20.45■□□□□ 0.86
NPHP4-206ENST00000468253 ALYREFQ86V81 257 aaKnown RBP20.45■□□□□ 0.86
NPHP4-206ENST00000468253 TMEM139Q8IV31 216 aa20.45■□□□□ 0.86
NPHP4-206ENST00000468253 HSPH1Q92598 858 aa20.45■□□□□ 0.86
NPHP4-206ENST00000468253 CCDC114Q96M63 670 aa20.45■□□□□ 0.86
NPHP4-206ENST00000468253 KLC2Q9H0B6 622 aa20.45■□□□□ 0.86
NPHP4-206ENST00000468253 PCDH18Q9HCL0 1135 aa20.45■□□□□ 0.86
NPHP4-206ENST00000468253 WSB2Q9NYS7 404 aaPredicted RBP20.45■□□□□ 0.86
NPHP4-206ENST00000468253 INVSQ9Y283 1065 aa20.45■□□□□ 0.86
NPHP4-206ENST00000468253 PCDHGA5Q9Y5G8 931 aa20.45■□□□□ 0.86
NPHP4-206ENST00000468253 BTNL10A8MVZ5 291 aa20.44■□□□□ 0.86
NPHP4-206ENST00000468253 SMAD6O43541 496 aaKnown RBP20.44■□□□□ 0.86
NPHP4-206ENST00000468253 CD160O95971 181 aa20.44■□□□□ 0.86
NPHP4-206ENST00000468253 GLDCP23378 1020 aa20.44■□□□□ 0.86
NPHP4-206ENST00000468253 CD6P30203 668 aa20.44■□□□□ 0.86
NPHP4-206ENST00000468253 HOXD11P31277 338 aaPredicted RBP20.44■□□□□ 0.86
NPHP4-206ENST00000468253 SMTNL2Q2TAL5 461 aa20.44■□□□□ 0.86
NPHP4-206ENST00000468253 FAM46CQ5VWP2 391 aa20.44■□□□□ 0.86
NPHP4-206ENST00000468253 PMS2CLQ68D20 193 aa20.44■□□□□ 0.86
NPHP4-206ENST00000468253 RAD9BQ6WBX8 426 aa20.44■□□□□ 0.86
NPHP4-206ENST00000468253 STK40Q8N2I9 435 aa20.44■□□□□ 0.86
NPHP4-206ENST00000468253 GPR161Q8N6U8 529 aaKnown RBP20.44■□□□□ 0.86
NPHP4-206ENST00000468253 PCDH20Q8N6Y1 951 aaKnown RBP20.44■□□□□ 0.86
NPHP4-206ENST00000468253 OR8D1Q8WZ84 308 aa20.44■□□□□ 0.86
NPHP4-206ENST00000468253 ERLEC1Q96DZ1 483 aa20.44■□□□□ 0.86
NPHP4-206ENST00000468253 CSPG4P5Q96PW8 444 aa20.44■□□□□ 0.86
NPHP4-206ENST00000468253 PCED1AQ9H1Q7 454 aa20.44■□□□□ 0.86
NPHP4-206ENST00000468253 GMEB2Q9UKD1 530 aa20.44■□□□□ 0.86
NPHP4-206ENST00000468253 PPM1HQ9ULR3 514 aa20.44■□□□□ 0.86
NPHP4-206ENST00000468253 DOCK4Q8N1I0 1966 aa20.44■□□□□ 0.86
NPHP4-206ENST00000468253 ARHGAP42A6NI28 874 aa20.43■□□□□ 0.86
NPHP4-206ENST00000468253 K7ERQ8 282 aa20.43■□□□□ 0.86
NPHP4-206ENST00000468253 ZNF821O75541 412 aaPredicted RBP20.43■□□□□ 0.86
NPHP4-206ENST00000468253 ADH1BP00325 375 aa20.43■□□□□ 0.86
NPHP4-206ENST00000468253 C5AR1P21730 350 aa20.43■□□□□ 0.86
NPHP4-206ENST00000468253 BCKDHBP21953 392 aa20.43■□□□□ 0.86
NPHP4-206ENST00000468253 SLC8A1P32418 973 aa20.43■□□□□ 0.86
NPHP4-206ENST00000468253 NOP2P46087 812 aaKnown RBP20.43■□□□□ 0.86
NPHP4-206ENST00000468253 CDH6P55285 790 aa20.43■□□□□ 0.86
NPHP4-206ENST00000468253 TAS2R40P59535 323 aa20.43■□□□□ 0.86
NPHP4-206ENST00000468253 CST6Q15828 149 aa20.43■□□□□ 0.86
NPHP4-206ENST00000468253 TTC31Q49AM3 519 aaPredicted RBP20.43■□□□□ 0.86
NPHP4-206ENST00000468253 LINGO4Q6UY18 593 aa20.43■□□□□ 0.86
NPHP4-206ENST00000468253 VSIG1Q86XK7 387 aa20.43■□□□□ 0.86
NPHP4-206ENST00000468253 TXLNBQ8N3L3 684 aa20.43■□□□□ 0.86
NPHP4-206ENST00000468253 FRMD1Q8N878 549 aa20.43■□□□□ 0.86
NPHP4-206ENST00000468253 KCTD6Q8NC69 237 aa20.43■□□□□ 0.86
NPHP4-206ENST00000468253 TMIEQ8NEW7 156 aa20.43■□□□□ 0.86
NPHP4-206ENST00000468253 CADM4Q8NFZ8 388 aa20.43■□□□□ 0.86
NPHP4-206ENST00000468253 OR2A12Q8NGT7 310 aa20.43■□□□□ 0.86
NPHP4-206ENST00000468253 HMCESQ96FZ2 354 aa20.43■□□□□ 0.86
NPHP4-206ENST00000468253 ZNF419Q96HQ0 510 aaPredicted RBP20.43■□□□□ 0.86
NPHP4-206ENST00000468253 PABPC3Q9H361 631 aaKnown RBP20.43■□□□□ 0.86
NPHP4-206ENST00000468253 CYP8B1Q9UNU6 501 aa20.43■□□□□ 0.86
NPHP4-206ENST00000468253 NCKAP1Q9Y2A7 1128 aa20.43■□□□□ 0.86
NPHP4-206ENST00000468253 SDK1Q7Z5N4 2213 aa20.42■□□□□ 0.86
NPHP4-206ENST00000468253 ZNF487B1APH4 448 aa20.42■□□□□ 0.86
NPHP4-206ENST00000468253 PJA2O43164 708 aa20.42■□□□□ 0.86
NPHP4-206ENST00000468253 BUB1O43683 1085 aa20.42■□□□□ 0.86
NPHP4-206ENST00000468253 EPN2O95208 641 aa20.42■□□□□ 0.86
NPHP4-206ENST00000468253 VAV1P15498 845 aa20.42■□□□□ 0.86
NPHP4-206ENST00000468253 DPP6P42658 865 aa20.42■□□□□ 0.86
NPHP4-206ENST00000468253 NUMBP49757 651 aa20.42■□□□□ 0.86
NPHP4-206ENST00000468253 KRT81Q14533 505 aa20.42■□□□□ 0.86
NPHP4-206ENST00000468253 ATP13A4Q4VNC1 1196 aa20.42■□□□□ 0.86
NPHP4-206ENST00000468253 LRRC49Q8IUZ0 686 aa20.42■□□□□ 0.86
NPHP4-206ENST00000468253 MMAAQ8IVH4 418 aaKnown RBP20.42■□□□□ 0.86
NPHP4-206ENST00000468253 FOXJ1Q92949 421 aa20.42■□□□□ 0.86
NPHP4-206ENST00000468253 TOE1Q96GM8 510 aaKnown RBP20.42■□□□□ 0.86
NPHP4-206ENST00000468253 SLC39A8Q9C0K1 460 aa20.42■□□□□ 0.86
NPHP4-206ENST00000468253 SGK2Q9HBY8 427 aa20.42■□□□□ 0.86
NPHP4-206ENST00000468253 NCDNQ9UBB6 729 aa20.42■□□□□ 0.86
NPHP4-206ENST00000468253 CKAP5Q14008 2032 aa20.41■□□□□ 0.86
NPHP4-206ENST00000468253 GVINP1Q7Z2Y8 2422 aa20.41■□□□□ 0.86
NPHP4-206ENST00000468253 NDUFS2O75306 463 aa20.41■□□□□ 0.86
NPHP4-206ENST00000468253 AMPD1P23109 780 aa20.41■□□□□ 0.86
NPHP4-206ENST00000468253 RECQLP46063 649 aaPredicted RBP20.41■□□□□ 0.86
NPHP4-206ENST00000468253 PAPOLAP51003 745 aaKnown RBP20.41■□□□□ 0.86
NPHP4-206ENST00000468253 LPAL2Q16609 132 aa20.41■□□□□ 0.86
NPHP4-206ENST00000468253 CARD16Q5EG05 197 aa20.41■□□□□ 0.86
NPHP4-206ENST00000468253 C22orf39Q6P5X5 142 aa20.41■□□□□ 0.86
NPHP4-206ENST00000468253 TMCO3Q6UWJ1 677 aa20.41■□□□□ 0.86
NPHP4-206ENST00000468253 Q6ZVU0 165 aa20.41■□□□□ 0.86
NPHP4-206ENST00000468253 ARHGAP12Q8IWW6 846 aa20.41■□□□□ 0.86
NPHP4-206ENST00000468253 ZNF670Q9BS34 389 aa20.41■□□□□ 0.86
NPHP4-206ENST00000468253 GRPEL1Q9HAV7 217 aa20.41■□□□□ 0.86
NPHP4-206ENST00000468253 REXO2Q9Y3B8 237 aaKnown RBP20.41■□□□□ 0.86
NPHP4-206ENST00000468253 ALG6Q9Y672 507 aa20.41■□□□□ 0.86
NPHP4-206ENST00000468253 BCLAF3A2AJT9 711 aaKnown RBP20.4■□□□□ 0.86
NPHP4-206ENST00000468253 GOLGA6L3A6NEY3 463 aa20.4■□□□□ 0.86
NPHP4-206ENST00000468253 TMEM110-MUSTN1A8MSY1 372 aa20.4■□□□□ 0.86
NPHP4-206ENST00000468253 FOXD2O60548 495 aaPredicted RBP20.4■□□□□ 0.86
NPHP4-206ENST00000468253 PRAMEF11O60813 436 aa20.4■□□□□ 0.86
NPHP4-206ENST00000468253 IL1BP01584 269 aa20.4■□□□□ 0.86
NPHP4-206ENST00000468253 PRNPP04156 253 aa20.4■□□□□ 0.86
NPHP4-206ENST00000468253 KDELR1P24390 212 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms