RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 FILIP1LQ4L180 1135 aa19.53■□□□□ 0.72
COL7A1-207ENST00000467985 ARTNQ5T4W7 220 aa19.53■□□□□ 0.72
COL7A1-207ENST00000467985 TBC1D3GQ6DHY5 549 aa19.53■□□□□ 0.72
COL7A1-207ENST00000467985 TBC1D3CQ6IPX1 549 aa19.53■□□□□ 0.72
COL7A1-207ENST00000467985 DBX2Q6ZNG2 339 aa19.53■□□□□ 0.72
COL7A1-207ENST00000467985 PHLDB2Q86SQ0 1253 aa19.53■□□□□ 0.72
COL7A1-207ENST00000467985 TBC1D3Q8IZP1 549 aaPredicted RBP19.53■□□□□ 0.72
COL7A1-207ENST00000467985 JOSD2Q8TAC2 188 aa19.53■□□□□ 0.72
COL7A1-207ENST00000467985 PIP4K2CQ8TBX8 421 aa19.53■□□□□ 0.72
COL7A1-207ENST00000467985 SETD7Q8WTS6 366 aaKnown RBP19.53■□□□□ 0.72
COL7A1-207ENST00000467985 FAM172AQ8WUF8 416 aa19.53■□□□□ 0.72
COL7A1-207ENST00000467985 ANP32EQ9BTT0 268 aa19.53■□□□□ 0.72
COL7A1-207ENST00000467985 ZNF212Q9UDV6 495 aa19.53■□□□□ 0.72
COL7A1-207ENST00000467985 PCOLCE2Q9UKZ9 415 aa19.53■□□□□ 0.72
COL7A1-207ENST00000467985 SARDHQ9UL12 918 aa19.53■□□□□ 0.72
COL7A1-207ENST00000467985 ZZEF1O43149 2961 aa19.53■□□□□ 0.72
COL7A1-207ENST00000467985 CXorf51AA0A1B0GTR3 108 aa19.52■□□□□ 0.72
COL7A1-207ENST00000467985 SIGLEC16A6NMB1 481 aa19.52■□□□□ 0.72
COL7A1-207ENST00000467985 CBX4O00257 560 aa19.52■□□□□ 0.72
COL7A1-207ENST00000467985 LATO43561 262 aa19.52■□□□□ 0.72
COL7A1-207ENST00000467985 PLRG1O43660 514 aaKnown RBP19.52■□□□□ 0.72
COL7A1-207ENST00000467985 BNIP3LO60238 219 aa19.52■□□□□ 0.72
COL7A1-207ENST00000467985 GPD1P21695 349 aa19.52■□□□□ 0.72
COL7A1-207ENST00000467985 CTSKP43235 329 aa19.52■□□□□ 0.72
COL7A1-207ENST00000467985 RECQLP46063 649 aaPredicted RBP19.52■□□□□ 0.72
COL7A1-207ENST00000467985 MAPKAPK2P49137 400 aa19.52■□□□□ 0.72
COL7A1-207ENST00000467985 GNA12Q03113 381 aa19.52■□□□□ 0.72
COL7A1-207ENST00000467985 SLC45A4Q5BKX6 768 aa19.52■□□□□ 0.72
COL7A1-207ENST00000467985 MON1BQ7L1V2 547 aa19.52■□□□□ 0.72
COL7A1-207ENST00000467985 GLRX5Q86SX6 157 aa19.52■□□□□ 0.72
COL7A1-207ENST00000467985 TMIEQ8NEW7 156 aa19.52■□□□□ 0.72
COL7A1-207ENST00000467985 OR2A12Q8NGT7 310 aa19.52■□□□□ 0.72
COL7A1-207ENST00000467985 CAMK1GQ96NX5 476 aa19.52■□□□□ 0.72
COL7A1-207ENST00000467985 CDC6Q99741 560 aa19.52■□□□□ 0.72
COL7A1-207ENST00000467985 SPON2Q9BUD6 331 aa19.52■□□□□ 0.72
COL7A1-207ENST00000467985 CEP44Q9C0F1 390 aa19.52■□□□□ 0.72
COL7A1-207ENST00000467985 ATP13A1Q9HD20 1204 aa19.52■□□□□ 0.72
COL7A1-207ENST00000467985 RTN4Q9NQC3 1192 aaKnown RBP19.52■□□□□ 0.72
COL7A1-207ENST00000467985 AASDHPPTQ9NRN7 309 aa19.52■□□□□ 0.72
COL7A1-207ENST00000467985 IGF2RP11717 2491 aa19.52■□□□□ 0.72
COL7A1-207ENST00000467985 CABIN1Q9Y6J0 2220 aa19.52■□□□□ 0.71
COL7A1-207ENST00000467985 WDFY3Q8IZQ1 3526 aa19.52■□□□□ 0.71
COL7A1-207ENST00000467985 SPEGQ15772 3267 aa19.52■□□□□ 0.71
COL7A1-207ENST00000467985 CBFA2T3O75081 653 aa19.51■□□□□ 0.71
COL7A1-207ENST00000467985 RTN2O75298 545 aa19.51■□□□□ 0.71
COL7A1-207ENST00000467985 PRNPP04156 253 aa19.51■□□□□ 0.71
COL7A1-207ENST00000467985 RHOQP17081 205 aa19.51■□□□□ 0.71
COL7A1-207ENST00000467985 DESP17661 470 aa19.51■□□□□ 0.71
COL7A1-207ENST00000467985 RRM1P23921 792 aa19.51■□□□□ 0.71
COL7A1-207ENST00000467985 CD38P28907 300 aa19.51■□□□□ 0.71
COL7A1-207ENST00000467985 CHRNA3P32297 505 aa19.51■□□□□ 0.71
COL7A1-207ENST00000467985 CCT8P50990 548 aa19.51■□□□□ 0.71
COL7A1-207ENST00000467985 FAM193AP78312 1265 aa19.51■□□□□ 0.71
COL7A1-207ENST00000467985 CNTN1Q12860 1018 aa19.51■□□□□ 0.71
COL7A1-207ENST00000467985 ST3GAL2Q16842 350 aa19.51■□□□□ 0.71
COL7A1-207ENST00000467985 MANEALQ5VSG8 457 aa19.51■□□□□ 0.71
COL7A1-207ENST00000467985 RWDD4Q6NW29 188 aaKnown RBP19.51■□□□□ 0.71
COL7A1-207ENST00000467985 DNAJC24Q6P3W2 148 aa19.51■□□□□ 0.71
COL7A1-207ENST00000467985 WDR59Q6PJI9 974 aa19.51■□□□□ 0.71
COL7A1-207ENST00000467985 PRPF39Q86UA1 669 aaKnown RBP19.51■□□□□ 0.71
COL7A1-207ENST00000467985 DRC7Q8IY82 874 aa19.51■□□□□ 0.71
COL7A1-207ENST00000467985 OR7D4Q8NG98 312 aa19.51■□□□□ 0.71
COL7A1-207ENST00000467985 NTAN1Q96AB6 310 aa19.51■□□□□ 0.71
COL7A1-207ENST00000467985 SERAC1Q96JX3 654 aa19.51■□□□□ 0.71
COL7A1-207ENST00000467985 SLC6A18Q96N87 628 aa19.51■□□□□ 0.71
COL7A1-207ENST00000467985 SCNM1Q9BWG6 230 aa19.51■□□□□ 0.71
COL7A1-207ENST00000467985 PREBQ9HCU5 417 aa19.51■□□□□ 0.71
COL7A1-207ENST00000467985 DYRK4Q9NR20 520 aa19.51■□□□□ 0.71
COL7A1-207ENST00000467985 NEUROG3Q9Y4Z2 214 aa19.51■□□□□ 0.71
COL7A1-207ENST00000467985 PLXNA2O75051 1894 aa19.51■□□□□ 0.71
COL7A1-207ENST00000467985 K7ERQ8 282 aa19.5■□□□□ 0.71
COL7A1-207ENST00000467985 SMAD6O43541 496 aaKnown RBP19.5■□□□□ 0.71
COL7A1-207ENST00000467985 PCDHGA12O60330 932 aa19.5■□□□□ 0.71
COL7A1-207ENST00000467985 GJB6O95452 261 aa19.5■□□□□ 0.71
COL7A1-207ENST00000467985 PLEKP08567 350 aaPredicted RBP19.5■□□□□ 0.71
COL7A1-207ENST00000467985 ZNF165P49910 485 aa19.5■□□□□ 0.71
COL7A1-207ENST00000467985 SERPINH1P50454 418 aaKnown RBP19.5■□□□□ 0.71
COL7A1-207ENST00000467985 ZNF143P52747 638 aaPredicted RBP19.5■□□□□ 0.71
COL7A1-207ENST00000467985 METAP1P53582 386 aa19.5■□□□□ 0.71
COL7A1-207ENST00000467985 HDAC4P56524 1084 aa19.5■□□□□ 0.71
COL7A1-207ENST00000467985 GEMIN4P57678 1058 aaKnown RBP19.5■□□□□ 0.71
COL7A1-207ENST00000467985 SCAPQ12770 1279 aa19.5■□□□□ 0.71
COL7A1-207ENST00000467985 INAVAQ3KP66 663 aa19.5■□□□□ 0.71
COL7A1-207ENST00000467985 AGBL4Q5VU57 503 aa19.5■□□□□ 0.71
COL7A1-207ENST00000467985 ACAD10Q6JQN1 1059 aa19.5■□□□□ 0.71
COL7A1-207ENST00000467985 C22orf39Q6P5X5 142 aa19.5■□□□□ 0.71
COL7A1-207ENST00000467985 LINGO4Q6UY18 593 aa19.5■□□□□ 0.71
COL7A1-207ENST00000467985 IRF2BP2Q7Z5L9 587 aa19.5■□□□□ 0.71
COL7A1-207ENST00000467985 TRIM69Q86WT6 500 aa19.5■□□□□ 0.71
COL7A1-207ENST00000467985 PCDH20Q8N6Y1 951 aaKnown RBP19.5■□□□□ 0.71
COL7A1-207ENST00000467985 TBC1D31Q96DN5 1066 aa19.5■□□□□ 0.71
COL7A1-207ENST00000467985 VCPIP1Q96JH7 1222 aa19.5■□□□□ 0.71
COL7A1-207ENST00000467985 EBF2Q9HAK2 575 aa19.5■□□□□ 0.71
COL7A1-207ENST00000467985 DMTF1Q9Y222 760 aa19.5■□□□□ 0.71
COL7A1-207ENST00000467985 APOBEC2Q9Y235 224 aaKnown RBP19.5■□□□□ 0.71
COL7A1-207ENST00000467985 A0A1W2PQC6 194 aa19.49■□□□□ 0.71
COL7A1-207ENST00000467985 H0Y8X5 98 aa19.49■□□□□ 0.71
COL7A1-207ENST00000467985 TEX33O43247 280 aa19.49■□□□□ 0.71
COL7A1-207ENST00000467985 ZMPSTE24O75844 475 aa19.49■□□□□ 0.71
COL7A1-207ENST00000467985 GLDCP23378 1020 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms