RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 PCDHGB3Q9Y5G1 929 aa4.56□□□□□ -1.68
SMC4-207ENST00000467263 IFNA2P01563 188 aa4.55□□□□□ -1.68
SMC4-207ENST00000467263 HLA-DQA2P01906 255 aa4.55□□□□□ -1.68
SMC4-207ENST00000467263 TK1P04183 234 aa4.55□□□□□ -1.68
SMC4-207ENST00000467263 TBXAS1P24557 533 aaPredicted RBP4.55□□□□□ -1.68
SMC4-207ENST00000467263 TNFSF8P32971 234 aa4.55□□□□□ -1.68
SMC4-207ENST00000467263 MCM2P49736 904 aa4.55□□□□□ -1.68
SMC4-207ENST00000467263 RPS6KA3P51812 740 aa4.55□□□□□ -1.68
SMC4-207ENST00000467263 ACTR2P61160 394 aa4.55□□□□□ -1.68
SMC4-207ENST00000467263 THOC5Q13769 683 aaKnown RBP4.55□□□□□ -1.68
SMC4-207ENST00000467263 ADCK5Q3MIX3 580 aa4.55□□□□□ -1.68
SMC4-207ENST00000467263 WASHC2DQ5SRD0 308 aa4.55□□□□□ -1.68
SMC4-207ENST00000467263 ANKRD45Q5TZF3 282 aa4.55□□□□□ -1.68
SMC4-207ENST00000467263 CTU1Q7Z7A3 348 aaKnown RBP4.55□□□□□ -1.68
SMC4-207ENST00000467263 GALNT7Q86SF2 657 aa4.55□□□□□ -1.68
SMC4-207ENST00000467263 TMEM57Q8N5G2 664 aa4.55□□□□□ -1.68
SMC4-207ENST00000467263 CEP70Q8NHQ1 597 aa4.55□□□□□ -1.68
SMC4-207ENST00000467263 SDCCAG3Q96C92 435 aa4.55□□□□□ -1.68
SMC4-207ENST00000467263 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.55□□□□□ -1.68
SMC4-207ENST00000467263 SIRT3Q9NTG7 399 aaPredicted RBP4.55□□□□□ -1.68
SMC4-207ENST00000467263 PLEKHB1Q9UF11 243 aaPredicted RBP4.55□□□□□ -1.68
SMC4-207ENST00000467263 DERAQ9Y315 318 aa4.55□□□□□ -1.68
SMC4-207ENST00000467263 RAP2CQ9Y3L5 183 aa4.55□□□□□ -1.68
SMC4-207ENST00000467263 A0A0A0MQY5 61 aa4.54□□□□□ -1.68
SMC4-207ENST00000467263 IFRD1O00458 451 aaPredicted RBP4.54□□□□□ -1.68
SMC4-207ENST00000467263 TNFRSF13BO14836 293 aaPredicted RBP4.54□□□□□ -1.68
SMC4-207ENST00000467263 IRAK2O43187 625 aa4.54□□□□□ -1.68
SMC4-207ENST00000467263 MVDP53602 400 aa4.54□□□□□ -1.68
SMC4-207ENST00000467263 ARHGAP8P85298 464 aa4.54□□□□□ -1.68
SMC4-207ENST00000467263 AP5B1Q2VPB7 878 aa4.54□□□□□ -1.68
SMC4-207ENST00000467263 VWA5B1Q5TIE3 1220 aa4.54□□□□□ -1.68
SMC4-207ENST00000467263 PARM1Q6UWI2 310 aa4.54□□□□□ -1.68
SMC4-207ENST00000467263 SLC16A12Q6ZSM3 486 aa4.54□□□□□ -1.68
SMC4-207ENST00000467263 C2CD5Q86YS7 1000 aa4.54□□□□□ -1.68
SMC4-207ENST00000467263 SCAIQ8N9R8 606 aa4.54□□□□□ -1.68
SMC4-207ENST00000467263 KDM1BQ8NB78 822 aa4.54□□□□□ -1.68
SMC4-207ENST00000467263 SPPL3Q8TCT6 385 aa4.54□□□□□ -1.68
SMC4-207ENST00000467263 IFT27Q9BW83 186 aa4.54□□□□□ -1.68
SMC4-207ENST00000467263 POLDIP3Q9BY77 421 aaKnown RBP4.54□□□□□ -1.68
SMC4-207ENST00000467263 B3GNT4Q9C0J1 378 aa4.54□□□□□ -1.68
SMC4-207ENST00000467263 CTDSP1Q9GZU7 261 aa4.54□□□□□ -1.68
SMC4-207ENST00000467263 RBM38Q9H0Z9 239 aaKnown RBP4.54□□□□□ -1.68
SMC4-207ENST00000467263 ISCUQ9H1K1 167 aa4.54□□□□□ -1.68
SMC4-207ENST00000467263 RNF146Q9NTX7 359 aa4.54□□□□□ -1.68
SMC4-207ENST00000467263 CDH22Q9UJ99 828 aa4.54□□□□□ -1.68
SMC4-207ENST00000467263 INSL5Q9Y5Q6 135 aa4.54□□□□□ -1.68
SMC4-207ENST00000467263 C4orf47A7E2U8 309 aa4.53□□□□□ -1.68
SMC4-207ENST00000467263 C17orf100A8MU93 164 aa4.53□□□□□ -1.68
SMC4-207ENST00000467263 PRSS44E7EML9 344 aa4.53□□□□□ -1.68
SMC4-207ENST00000467263 CBX6O95503 412 aa4.53□□□□□ -1.68
SMC4-207ENST00000467263 DDAH2O95865 285 aa4.53□□□□□ -1.68
SMC4-207ENST00000467263 CPA1P15085 419 aa4.53□□□□□ -1.68
SMC4-207ENST00000467263 BYSLQ13895 437 aaKnown RBP4.53□□□□□ -1.68
SMC4-207ENST00000467263 SYTL3Q4VX76 610 aa4.53□□□□□ -1.68
SMC4-207ENST00000467263 Q5PR19 223 aa4.53□□□□□ -1.68
SMC4-207ENST00000467263 LVRNQ6Q4G3 990 aa4.53□□□□□ -1.68
SMC4-207ENST00000467263 LDHAL6AQ6ZMR3 332 aa4.53□□□□□ -1.68
SMC4-207ENST00000467263 Q6ZTC4 211 aa4.53□□□□□ -1.68
SMC4-207ENST00000467263 USP43Q70EL4 1123 aa4.53□□□□□ -1.68
SMC4-207ENST00000467263 FAM185AQ8N0U4 392 aa4.53□□□□□ -1.68
SMC4-207ENST00000467263 HORMAD2Q8N7B1 307 aa4.53□□□□□ -1.68
SMC4-207ENST00000467263 ANKRD42Q8N9B4 389 aa4.53□□□□□ -1.68
SMC4-207ENST00000467263 C7orf57Q8NEG2 295 aa4.53□□□□□ -1.68
SMC4-207ENST00000467263 B4GALNT2Q8NHY0 566 aa4.53□□□□□ -1.68
SMC4-207ENST00000467263 FAR1Q8WVX9 515 aa4.53□□□□□ -1.68
SMC4-207ENST00000467263 THOC3Q96J01 351 aaKnown RBP4.53□□□□□ -1.68
SMC4-207ENST00000467263 COG8Q96MW5 612 aa4.53□□□□□ -1.68
SMC4-207ENST00000467263 WDR77Q9BQA1 342 aaPredicted RBP4.53□□□□□ -1.68
SMC4-207ENST00000467263 HERPUD2Q9BSE4 406 aa4.53□□□□□ -1.68
SMC4-207ENST00000467263 MRPL44Q9H9J2 332 aaKnown RBP4.53□□□□□ -1.68
SMC4-207ENST00000467263 ZDHHC7Q9NXF8 308 aa4.53□□□□□ -1.68
SMC4-207ENST00000467263 ICKQ9UPZ9 632 aa4.53□□□□□ -1.68
SMC4-207ENST00000467263 DNAJC16Q9Y2G8 782 aa4.53□□□□□ -1.68
SMC4-207ENST00000467263 RRP7AQ9Y3A4 280 aaKnown RBP4.53□□□□□ -1.68
SMC4-207ENST00000467263 SLC4A4Q9Y6R1 1079 aa4.53□□□□□ -1.68
SMC4-207ENST00000467263 RPS10-NUDT3A0A1W2PQS6 291 aa4.52□□□□□ -1.69
SMC4-207ENST00000467263 TARSL2A2RTX5 802 aaKnown RBP4.52□□□□□ -1.69
SMC4-207ENST00000467263 TMEM247A6NEH6 219 aa4.52□□□□□ -1.69
SMC4-207ENST00000467263 BECN2A8MW95 431 aa4.52□□□□□ -1.69
SMC4-207ENST00000467263 STMND1H3BQB6 276 aa4.52□□□□□ -1.69
SMC4-207ENST00000467263 STRNO43815 780 aa4.52□□□□□ -1.69
SMC4-207ENST00000467263 TMCC1O94876 653 aa4.52□□□□□ -1.69
SMC4-207ENST00000467263 METTL18O95568 372 aa4.52□□□□□ -1.69
SMC4-207ENST00000467263 KLKB1P03952 638 aa4.52□□□□□ -1.69
SMC4-207ENST00000467263 PRKCHP24723 683 aa4.52□□□□□ -1.69
SMC4-207ENST00000467263 ARL4CP56559 192 aa4.52□□□□□ -1.69
SMC4-207ENST00000467263 PKP1Q13835 747 aa4.52□□□□□ -1.69
SMC4-207ENST00000467263 IL13RA2Q14627 380 aa4.52□□□□□ -1.69
SMC4-207ENST00000467263 CTXN3Q4LDR2 81 aa4.52□□□□□ -1.69
SMC4-207ENST00000467263 SH2D4BQ5SQS7 431 aa4.52□□□□□ -1.69
SMC4-207ENST00000467263 TMEM268Q5VZI3 342 aa4.52□□□□□ -1.69
SMC4-207ENST00000467263 AADACL2Q6P093 401 aa4.52□□□□□ -1.69
SMC4-207ENST00000467263 TMEM71Q6P5X7 295 aa4.52□□□□□ -1.69
SMC4-207ENST00000467263 Q6ZTK2 550 aa4.52□□□□□ -1.69
SMC4-207ENST00000467263 WDR5BQ86VZ2 330 aa4.52□□□□□ -1.69
SMC4-207ENST00000467263 CAMK1DQ8IU85 385 aa4.52□□□□□ -1.69
SMC4-207ENST00000467263 HERC6Q8IVU3 1022 aa4.52□□□□□ -1.69
SMC4-207ENST00000467263 ANKRD44Q8N8A2 993 aa4.52□□□□□ -1.69
SMC4-207ENST00000467263 ENGASEQ8NFI3 743 aa4.52□□□□□ -1.69
SMC4-207ENST00000467263 TRIM63Q969Q1 353 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms