RNA–Protein interactions for RNA: ENST00000466776.5

GTF3A-205, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-205ENST00000466776 HS3ST4Q9Y661 456 aa12.26□□□□□ -0.45
GTF3A-205ENST00000466776 IGSF10Q6WRI0 2623 aa12.26□□□□□ -0.45
GTF3A-205ENST00000466776 LAMA5O15230 3695 aa12.25□□□□□ -0.45
GTF3A-205ENST00000466776 BECN2A8MW95 431 aa12.25□□□□□ -0.45
GTF3A-205ENST00000466776 KPNA3O00505 521 aaPredicted RBP12.25□□□□□ -0.45
GTF3A-205ENST00000466776 THEGLP0DJG4 465 aa12.25□□□□□ -0.45
GTF3A-205ENST00000466776 PRKCSHP14314 528 aaPredicted RBP12.25□□□□□ -0.45
GTF3A-205ENST00000466776 SLC9A1P19634 815 aa12.25□□□□□ -0.45
GTF3A-205ENST00000466776 HNRNPA2B1P22626 353 aaKnown RBP12.25□□□□□ -0.45
GTF3A-205ENST00000466776 GLDCP23378 1020 aa12.25□□□□□ -0.45
GTF3A-205ENST00000466776 MTIF2P46199 727 aaKnown RBP12.25□□□□□ -0.45
GTF3A-205ENST00000466776 SULT1E1P49888 294 aa12.25□□□□□ -0.45
GTF3A-205ENST00000466776 ZNF211Q13398 564 aaPredicted RBP12.25□□□□□ -0.45
GTF3A-205ENST00000466776 RTP5Q14D33 572 aa12.25□□□□□ -0.45
GTF3A-205ENST00000466776 C5orf22Q49AR2 442 aa12.25□□□□□ -0.45
GTF3A-205ENST00000466776 GJB7Q6PEY0 223 aa12.25□□□□□ -0.45
GTF3A-205ENST00000466776 OLFML1Q6UWY5 402 aa12.25□□□□□ -0.45
GTF3A-205ENST00000466776 SPATS2Q86XZ4 545 aaKnown RBP12.25□□□□□ -0.45
GTF3A-205ENST00000466776 FAM114A1Q8IWE2 563 aa12.25□□□□□ -0.45
GTF3A-205ENST00000466776 DCAF4L2Q8NA75 395 aa12.25□□□□□ -0.45
GTF3A-205ENST00000466776 MSANTD4Q8NCY6 345 aa12.25□□□□□ -0.45
GTF3A-205ENST00000466776 TMIEQ8NEW7 156 aa12.25□□□□□ -0.45
GTF3A-205ENST00000466776 ZNF397Q8NF99 534 aaPredicted RBP12.25□□□□□ -0.45
GTF3A-205ENST00000466776 RFFLQ8WZ73 363 aa12.25□□□□□ -0.45
GTF3A-205ENST00000466776 TKTL2Q9H0I9 626 aa12.25□□□□□ -0.45
GTF3A-205ENST00000466776 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.25□□□□□ -0.45
GTF3A-205ENST00000466776 CELSR3Q9NYQ7 3312 aa12.25□□□□□ -0.45
GTF3A-205ENST00000466776 LOC400499M0QZD8 3231 aa12.24□□□□□ -0.45
GTF3A-205ENST00000466776 A0A1W2PQU0 124 aa12.24□□□□□ -0.45
GTF3A-205ENST00000466776 NEMP2A6NFY4 417 aa12.24□□□□□ -0.45
GTF3A-205ENST00000466776 SLC31A1O15431 190 aa12.24□□□□□ -0.45
GTF3A-205ENST00000466776 SDC3O75056 442 aa12.24□□□□□ -0.45
GTF3A-205ENST00000466776 PCDH8O95206 1070 aa12.24□□□□□ -0.45
GTF3A-205ENST00000466776 ERBB2P04626 1255 aa12.24□□□□□ -0.45
GTF3A-205ENST00000466776 SRCP12931 536 aa12.24□□□□□ -0.45
GTF3A-205ENST00000466776 CHRNA3P32297 505 aa12.24□□□□□ -0.45
GTF3A-205ENST00000466776 ACTN2P35609 894 aa12.24□□□□□ -0.45
GTF3A-205ENST00000466776 EIF2S3P41091 472 aaKnown RBP12.24□□□□□ -0.45
GTF3A-205ENST00000466776 METAP1P53582 386 aa12.24□□□□□ -0.45
GTF3A-205ENST00000466776 DEUP1Q05D60 604 aa12.24□□□□□ -0.45
GTF3A-205ENST00000466776 PIP5KL1Q5T9C9 394 aa12.24□□□□□ -0.45
GTF3A-205ENST00000466776 RETSATQ6NUM9 610 aa12.24□□□□□ -0.45
GTF3A-205ENST00000466776 ZSCAN30Q86W11 494 aa12.24□□□□□ -0.45
GTF3A-205ENST00000466776 HORMAD1Q86X24 394 aa12.24□□□□□ -0.45
GTF3A-205ENST00000466776 DCP2Q8IU60 420 aaKnown RBP12.24□□□□□ -0.45
GTF3A-205ENST00000466776 WDTC1Q8N5D0 677 aa12.24□□□□□ -0.45
GTF3A-205ENST00000466776 TMEM145Q8NBT3 493 aa12.24□□□□□ -0.45
GTF3A-205ENST00000466776 TMEM35BQ8NCS4 154 aa12.24□□□□□ -0.45
GTF3A-205ENST00000466776 OR4C6Q8NH72 309 aa12.24□□□□□ -0.45
GTF3A-205ENST00000466776 SNIP1Q8TAD8 396 aaKnown RBP12.24□□□□□ -0.45
GTF3A-205ENST00000466776 CHD5Q8TDI0 1954 aa12.24□□□□□ -0.45
GTF3A-205ENST00000466776 CALN1Q9BXU9 219 aa12.24□□□□□ -0.45
GTF3A-205ENST00000466776 KLHL11Q9NVR0 708 aa12.24□□□□□ -0.45
GTF3A-205ENST00000466776 OR51B4Q9Y5P0 310 aa12.24□□□□□ -0.45
GTF3A-205ENST00000466776 PTPRQQ9UMZ3 2332 aa12.23□□□□□ -0.45
GTF3A-205ENST00000466776 A6NNZ2 444 aa12.23□□□□□ -0.45
GTF3A-205ENST00000466776 SIGLEC6O43699 453 aa12.23□□□□□ -0.45
GTF3A-205ENST00000466776 ADCY5O95622 1261 aa12.23□□□□□ -0.45
GTF3A-205ENST00000466776 PON1P27169 355 aa12.23□□□□□ -0.45
GTF3A-205ENST00000466776 OR1E1P30953 314 aa12.23□□□□□ -0.45
GTF3A-205ENST00000466776 SCNN1AP37088 669 aa12.23□□□□□ -0.45
GTF3A-205ENST00000466776 GGCXP38435 758 aa12.23□□□□□ -0.45
GTF3A-205ENST00000466776 CXCR3P49682 368 aa12.23□□□□□ -0.45
GTF3A-205ENST00000466776 DUSP3P51452 185 aaPredicted RBP12.23□□□□□ -0.45
GTF3A-205ENST00000466776 IRAK1P51617 712 aa12.23□□□□□ -0.45
GTF3A-205ENST00000466776 TAS2R38P59533 333 aa12.23□□□□□ -0.45
GTF3A-205ENST00000466776 RNASE9P60153 205 aaKnown RBP12.23□□□□□ -0.45
GTF3A-205ENST00000466776 KCNMA1Q12791 1236 aa12.23□□□□□ -0.45
GTF3A-205ENST00000466776 PROX2Q3B8N5 592 aa12.23□□□□□ -0.45
GTF3A-205ENST00000466776 PTPN20Q4JDL3 420 aa12.23□□□□□ -0.45
GTF3A-205ENST00000466776 C22orf39Q6P5X5 142 aa12.23□□□□□ -0.45
GTF3A-205ENST00000466776 ZNF783Q6ZMS7 281 aa12.23□□□□□ -0.45
GTF3A-205ENST00000466776 ERN2Q76MJ5 926 aaKnown RBP12.23□□□□□ -0.45
GTF3A-205ENST00000466776 KANSL1Q7Z3B3 1105 aa12.23□□□□□ -0.45
GTF3A-205ENST00000466776 OR52K2Q8NGK3 314 aa12.23□□□□□ -0.45
GTF3A-205ENST00000466776 FGF11Q92914 225 aa12.23□□□□□ -0.45
GTF3A-205ENST00000466776 PGAP3Q96FM1 320 aaPredicted RBP12.23□□□□□ -0.45
GTF3A-205ENST00000466776 IFT43Q96FT9 208 aa12.23□□□□□ -0.45
GTF3A-205ENST00000466776 C1orf74Q96LT6 269 aa12.23□□□□□ -0.45
GTF3A-205ENST00000466776 NPY6RQ99463 290 aa12.23□□□□□ -0.45
GTF3A-205ENST00000466776 MYOCQ99972 504 aa12.23□□□□□ -0.45
GTF3A-205ENST00000466776 DUSP23Q9BVJ7 150 aa12.23□□□□□ -0.45
GTF3A-205ENST00000466776 PIGVQ9NUD9 493 aa12.23□□□□□ -0.45
GTF3A-205ENST00000466776 ARHGEF38Q9NXL2 777 aa12.23□□□□□ -0.45
GTF3A-205ENST00000466776 KIAA1468Q9P260 1216 aa12.23□□□□□ -0.45
GTF3A-205ENST00000466776 IL36AQ9UHA7 158 aa12.23□□□□□ -0.45
GTF3A-205ENST00000466776 VPS51Q9UID3 782 aa12.23□□□□□ -0.45
GTF3A-205ENST00000466776 DNAJC12Q9UKB3 198 aa12.23□□□□□ -0.45
GTF3A-205ENST00000466776 H3BM21 787 aa12.22□□□□□ -0.45
GTF3A-205ENST00000466776 TK2O00142 265 aa12.22□□□□□ -0.45
GTF3A-205ENST00000466776 RIOK3O14730 519 aaKnown RBP12.22□□□□□ -0.45
GTF3A-205ENST00000466776 SNAP91O60641 907 aa12.22□□□□□ -0.45
GTF3A-205ENST00000466776 CNTN5O94779 1100 aa12.22□□□□□ -0.45
GTF3A-205ENST00000466776 PRLRP16471 622 aa12.22□□□□□ -0.45
GTF3A-205ENST00000466776 DGKAP23743 735 aa12.22□□□□□ -0.45
GTF3A-205ENST00000466776 RRM1P23921 792 aa12.22□□□□□ -0.45
GTF3A-205ENST00000466776 ETFBP38117 255 aa12.22□□□□□ -0.45
GTF3A-205ENST00000466776 NEK3P51956 506 aa12.22□□□□□ -0.45
GTF3A-205ENST00000466776 CLDN6P56747 220 aa12.22□□□□□ -0.45
GTF3A-205ENST00000466776 HNRNPKP61978 463 aaKnown RBP eCLIP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms