RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 RGS9BPQ6ZS82 235 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 C15orf52Q6ZUT6 534 aaKnown RBP3.6□□□□□ -1.83
SORT1-202ENST00000466471 TRPM8Q7Z2W7 1104 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 SPPL2CQ8IUH8 684 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 TBC1D10CQ8IV04 446 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 HERC6Q8IVU3 1022 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 FAM126BQ8IXS8 530 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 RBM12BQ8IXT5 1001 aaKnown RBP3.6□□□□□ -1.83
SORT1-202ENST00000466471 SRBD1Q8N5C6 995 aaKnown RBP3.6□□□□□ -1.83
SORT1-202ENST00000466471 VGLL2Q8N8G2 317 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 LRRC57Q8N9N7 239 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 CCDC63Q8NA47 563 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 CCDC197Q8NCU1 140 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 GPR156Q8NFN8 814 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 SPATA18Q8TC71 538 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 BRIX1Q8TDN6 353 aaKnown RBP3.6□□□□□ -1.83
SORT1-202ENST00000466471 AGAP11Q8TF27 550 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 NSMCE1Q8WV22 266 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 IPCEF1Q8WWN9 437 aaPredicted RBP3.6□□□□□ -1.83
SORT1-202ENST00000466471 CLEC4DQ8WXI8 215 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 LZICQ8WZA0 190 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 HOXB13Q92826 284 aaPredicted RBP3.6□□□□□ -1.83
SORT1-202ENST00000466471 AZIN2Q96A70 460 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 FAM136AQ96C01 138 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 SDCCAG3Q96C92 435 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 GRAMD1AQ96CP6 724 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 HVCN1Q96D96 273 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 LIN37Q96GY3 246 aaPredicted RBP3.6□□□□□ -1.83
SORT1-202ENST00000466471 PEX11GQ96HA9 241 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 EPSTI1Q96J88 318 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 CCDC42Q96M95 316 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 CCDC43Q96MW1 224 aaKnown RBP3.6□□□□□ -1.83
SORT1-202ENST00000466471 ZNF570Q96NI8 536 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 TRAPPC9Q96Q05 1148 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 XPO6Q96QU8 1125 aaKnown RBP3.6□□□□□ -1.83
SORT1-202ENST00000466471 JMJD8Q96S16 334 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 TUBGCP2Q9BSJ2 902 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 MMTAG2Q9BU76 263 aaKnown RBP3.6□□□□□ -1.83
SORT1-202ENST00000466471 SLC26A6Q9BXS9 759 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 KRTAP4-11Q9BYQ6 195 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 OSBPL6Q9BZF3 934 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.6□□□□□ -1.83
SORT1-202ENST00000466471 FAM192AQ9GZU8 254 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 MAGEH1Q9H213 219 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 EPB41L4BQ9H329 900 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 MTG2Q9H4K7 406 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 PLEKHA4Q9H4M7 779 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 RNF41Q9H4P4 317 aaPredicted RBP3.6□□□□□ -1.83
SORT1-202ENST00000466471 CNTD2Q9H8S5 307 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 TXNRD2Q9NNW7 524 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 SARS2Q9NP81 518 aaKnown RBP3.6□□□□□ -1.83
SORT1-202ENST00000466471 FAM114A2Q9NRY5 505 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 ATP8A2Q9NTI2 1148 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 AGPAT5Q9NUQ2 364 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 PNPOQ9NVS9 261 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.6□□□□□ -1.83
SORT1-202ENST00000466471 SIDT1Q9NXL6 827 aaKnown RBP3.6□□□□□ -1.83
SORT1-202ENST00000466471 RGL1Q9NZL6 768 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 FTSJ1Q9UET6 329 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 CNOT8Q9UFF9 292 aaKnown RBP3.6□□□□□ -1.83
SORT1-202ENST00000466471 EVLQ9UI08 416 aaPredicted RBP3.6□□□□□ -1.83
SORT1-202ENST00000466471 RWDD3Q9Y3V2 267 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 PCDHB1Q9Y5F3 818 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 ZHX2Q9Y6X8 837 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 R4GN57 208 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 UMODL1Q5DID0 1318 aa3.6□□□□□ -1.83
SORT1-202ENST00000466471 LRBAP50851 2863 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 PATJQ8NI35 1801 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 GOLGA6L10A6NI86 522 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 RRN3P2A6NIE6 340 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 SLC15A5A6NIM6 579 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 SIGLEC16A6NMB1 481 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 CCDC169A6NNP5 214 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 E7EVH7 732 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 F8VZ95 297 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 PSMA7O14818 248 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 NPC1O15118 1278 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 HOXC11O43248 304 aaPredicted RBP3.59□□□□□ -1.83
SORT1-202ENST00000466471 THAP12O43422 761 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 HNRNPCL1O60812 293 aaKnown RBP3.59□□□□□ -1.83
SORT1-202ENST00000466471 TBX10O75333 385 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 HEXIM1O94992 359 aaKnown RBP3.59□□□□□ -1.83
SORT1-202ENST00000466471 APOL3O95236 402 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 CD4P01730 458 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 ANXA1P04083 346 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 SERPING1P05155 500 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 ANXA2P07355 339 aaKnown RBP3.59□□□□□ -1.83
SORT1-202ENST00000466471 ITGA5P08648 1049 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 UQCRFS1P1P0C7P4 283 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 CALM1P0DP23 149 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 CALM2P0DP24 149 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 CALM3P0DP25 149 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 PDHBP11177 359 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 MYL4P12829 197 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 BRAFP15056 766 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 FGFR2P21802 821 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 CFPP27918 469 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 GUCY1A2P33402 732 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 KRT2P35908 639 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 PRKCIP41743 596 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms