RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 DDX50Q9BQ39 737 aaKnown RBP16.64■□□□□ 0.26
SLX4-202ENST00000466154 CDH9Q9ULB4 789 aa16.64■□□□□ 0.26
SLX4-202ENST00000466154 SLC45A1Q9Y2W3 748 aa16.64■□□□□ 0.26
SLX4-202ENST00000466154 TRPV2Q9Y5S1 764 aa16.64■□□□□ 0.26
SLX4-202ENST00000466154 ZSWIM8A7E2V4 1837 aa16.64■□□□□ 0.25
SLX4-202ENST00000466154 HAS3O00219 553 aa16.64■□□□□ 0.25
SLX4-202ENST00000466154 TUBP50607 506 aa16.64■□□□□ 0.25
SLX4-202ENST00000466154 ZRSR2Q15696 482 aaKnown RBP16.64■□□□□ 0.25
SLX4-202ENST00000466154 MORN1Q5T089 497 aa16.64■□□□□ 0.25
SLX4-202ENST00000466154 ESRP1Q6NXG1 681 aaKnown RBP16.64■□□□□ 0.25
SLX4-202ENST00000466154 MAB21L3Q8N8X9 362 aa16.64■□□□□ 0.25
SLX4-202ENST00000466154 OR52B2Q96RD2 323 aa16.64■□□□□ 0.25
SLX4-202ENST00000466154 HTTP42858 3142 aa16.64■□□□□ 0.25
SLX4-202ENST00000466154 CCL22O00626 93 aa16.64■□□□□ 0.25
SLX4-202ENST00000466154 IL1BP01584 269 aa16.64■□□□□ 0.25
SLX4-202ENST00000466154 ODC1P11926 461 aa16.64■□□□□ 0.25
SLX4-202ENST00000466154 SKIP12755 728 aa16.64■□□□□ 0.25
SLX4-202ENST00000466154 ARPP19P56211 112 aa16.64■□□□□ 0.25
SLX4-202ENST00000466154 MAXP61244 160 aa16.64■□□□□ 0.25
SLX4-202ENST00000466154 CDH17Q12864 832 aa16.64■□□□□ 0.25
SLX4-202ENST00000466154 HPS6Q86YV9 775 aa16.64■□□□□ 0.25
SLX4-202ENST00000466154 RAB3IL1Q8TBN0 382 aa16.64■□□□□ 0.25
SLX4-202ENST00000466154 TEKT5Q96M29 485 aa16.64■□□□□ 0.25
SLX4-202ENST00000466154 GATA5Q9BWX5 397 aaPredicted RBP16.64■□□□□ 0.25
SLX4-202ENST00000466154 BATF3Q9NR55 127 aa16.64■□□□□ 0.25
SLX4-202ENST00000466154 NDE1Q9NXR1 346 aa16.64■□□□□ 0.25
SLX4-202ENST00000466154 PLA2G4CQ9UP65 541 aa16.64■□□□□ 0.25
SLX4-202ENST00000466154 KLC1Q07866 573 aa16.63■□□□□ 0.25
SLX4-202ENST00000466154 NAPEPLDQ6IQ20 393 aa16.63■□□□□ 0.25
SLX4-202ENST00000466154 TAF2Q6P1X5 1199 aa16.63■□□□□ 0.25
SLX4-202ENST00000466154 ISLR2Q6UXK2 745 aa16.63■□□□□ 0.25
SLX4-202ENST00000466154 IZUMO2Q6UXV1 221 aa16.63■□□□□ 0.25
SLX4-202ENST00000466154 TMEM135Q86UB9 458 aa16.63■□□□□ 0.25
SLX4-202ENST00000466154 OR10T2Q8NGX3 314 aa16.63■□□□□ 0.25
SLX4-202ENST00000466154 SH3TC2Q8TF17 1288 aa16.63■□□□□ 0.25
SLX4-202ENST00000466154 ACE2Q9BYF1 805 aaPredicted RBP16.63■□□□□ 0.25
SLX4-202ENST00000466154 CYP4F12Q9HCS2 524 aa16.63■□□□□ 0.25
SLX4-202ENST00000466154 CASS4Q9NQ75 786 aa16.63■□□□□ 0.25
SLX4-202ENST00000466154 DPPA5A6NC42 116 aa16.63■□□□□ 0.25
SLX4-202ENST00000466154 TRIM13O60858 407 aa16.63■□□□□ 0.25
SLX4-202ENST00000466154 KLHL2O95198 593 aa16.63■□□□□ 0.25
SLX4-202ENST00000466154 F9P00740 461 aa16.63■□□□□ 0.25
SLX4-202ENST00000466154 HMBSP08397 361 aa16.63■□□□□ 0.25
SLX4-202ENST00000466154 ANPEPP15144 967 aa16.63■□□□□ 0.25
SLX4-202ENST00000466154 AP2B1P63010 937 aa16.63■□□□□ 0.25
SLX4-202ENST00000466154 CNGA3Q16281 694 aa16.63■□□□□ 0.25
SLX4-202ENST00000466154 CCDC153Q494R4 210 aa16.63■□□□□ 0.25
SLX4-202ENST00000466154 SMYD5Q6GMV2 418 aa16.63■□□□□ 0.25
SLX4-202ENST00000466154 OVOS1Q6IE37 1185 aa16.63■□□□□ 0.25
SLX4-202ENST00000466154 FRMD7Q6ZUT3 714 aa16.63■□□□□ 0.25
SLX4-202ENST00000466154 KBTBD2Q8IY47 623 aa16.63■□□□□ 0.25
SLX4-202ENST00000466154 TMEM86AQ8N2M4 240 aa16.63■□□□□ 0.25
SLX4-202ENST00000466154 UPF1Q92900 1129 aaKnown RBP eCLIP16.63■□□□□ 0.25
SLX4-202ENST00000466154 HDAC11Q96DB2 347 aa16.63■□□□□ 0.25
SLX4-202ENST00000466154 ELMO2Q96JJ3 720 aa16.63■□□□□ 0.25
SLX4-202ENST00000466154 NDNQ99608 321 aa16.63■□□□□ 0.25
SLX4-202ENST00000466154 CHST12Q9NRB3 414 aa16.63■□□□□ 0.25
SLX4-202ENST00000466154 RBM22Q9NW64 420 aaKnown RBP eCLIP16.63■□□□□ 0.25
SLX4-202ENST00000466154 STX18Q9P2W9 335 aaKnown RBP16.63■□□□□ 0.25
SLX4-202ENST00000466154 PADI3Q9ULW8 664 aa16.63■□□□□ 0.25
SLX4-202ENST00000466154 NCAM2O15394 837 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 MGEA5O60502 916 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 ZCCHC18P0CG32 403 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 GRIA4P48058 902 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 TUBB3Q13509 450 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 ITGA7Q13683 1181 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 FAM219BQ5XKK7 198 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 TMEM198Q66K66 360 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 RPS27LQ71UM5 84 aaKnown RBP16.62■□□□□ 0.25
SLX4-202ENST00000466154 NTAN1Q96AB6 310 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 FAM136AQ96C01 138 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 FCRL2Q96LA5 508 aaPredicted RBP16.62■□□□□ 0.25
SLX4-202ENST00000466154 ADAM2Q99965 735 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 IL22Q9GZX6 179 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 DMAP1Q9NPF5 467 aaPredicted RBP16.62■□□□□ 0.25
SLX4-202ENST00000466154 ANGPTL2Q9UKU9 493 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 PAGE1O75459 146 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 CCNG1P51959 295 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 GALNT2Q10471 571 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 SEMA3BQ13214 749 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 BLMHQ13867 455 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 PPM1LQ5SGD2 360 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 CYS1Q717R9 158 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 LIMS2Q7Z4I7 341 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 ZSCAN18Q8TBC5 510 aaPredicted RBP16.62■□□□□ 0.25
SLX4-202ENST00000466154 PABPC5Q96DU9 382 aaKnown RBP16.62■□□□□ 0.25
SLX4-202ENST00000466154 SLC9A7Q96T83 725 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 MMADHCQ9H3L0 296 aaPredicted RBP16.62■□□□□ 0.25
SLX4-202ENST00000466154 PRG3Q9Y2Y8 225 aaPredicted RBP16.62■□□□□ 0.25
SLX4-202ENST00000466154 HHLA1C9JL84 531 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 TIMM44O43615 452 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 ZBTB14O43829 449 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 MAGEC1O60732 1142 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 PIGNO95427 931 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 AHSGP02765 367 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 RGS2P41220 211 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 PLK1P53350 603 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 UPP1Q16831 310 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 SPATA2LQ8IUW3 424 aaPredicted RBP16.62■□□□□ 0.25
SLX4-202ENST00000466154 TBL1YQ9BQ87 522 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms