RNA–Protein interactions for RNA: ENST00000465534.5

CD55-207, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 1,480 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-207ENST00000465534 COL12A1Q99715 3063 aa3.32□□□□□ -1.88
CD55-207ENST00000465534 COL6A6A6NMZ7 2263 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 hCG_2014768A0A024R1R8 64 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 CCL15-CCL14A0A0B4J2E2 113 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.31□□□□□ -1.88
CD55-207ENST00000465534 PABPN1LA6NDY0 278 aaKnown RBP3.31□□□□□ -1.88
CD55-207ENST00000465534 LRRC14BA6NHZ5 514 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 H3BQ06 376 aaPredicted RBP3.31□□□□□ -1.88
CD55-207ENST00000465534 BOLA2-SMG1P6H3BVE0 249 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 PDGFBP01127 241 aaPredicted RBP3.31□□□□□ -1.88
CD55-207ENST00000465534 PHKG2P15735 406 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 CD53P19397 219 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 PDE6CP51160 858 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 TBX4P57082 545 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 POSTNQ15063 836 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 CCDC6Q16204 474 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 CCL15Q16663 113 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 PTPROQ16827 1216 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 PARP10Q53GL7 1025 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 DGKKQ5KSL6 1271 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 THEMIS2Q5TEJ8 643 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 SFMBT2Q5VUG0 894 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 TTLL5Q6EMB2 1281 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 PSRC1Q6PGN9 363 aaPredicted RBP3.31□□□□□ -1.88
CD55-207ENST00000465534 LEKR1Q6ZMV7 388 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 DEF8Q6ZN54 512 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 LCA5Q86VQ0 697 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 NDUFAF2Q8N183 169 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 SIRT6Q8N6T7 355 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 CNTD1Q8N815 330 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 ZNF398Q8TD17 642 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 OSCP1Q8WVF1 389 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 MAP4K1Q92918 833 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 THOC1Q96FV9 657 aaKnown RBP3.31□□□□□ -1.88
CD55-207ENST00000465534 ZFYVE19Q96K21 471 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 RPS6KC1Q96S38 1066 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 BAG1Q99933 345 aaPredicted RBP3.31□□□□□ -1.88
CD55-207ENST00000465534 CRACR2AQ9BSW2 395 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 ALDH8A1Q9H2A2 487 aaPredicted RBP3.31□□□□□ -1.88
CD55-207ENST00000465534 DHX36Q9H2U1 1008 aaKnown RBP3.31□□□□□ -1.88
CD55-207ENST00000465534 MRPL46Q9H2W6 279 aaKnown RBP3.31□□□□□ -1.88
CD55-207ENST00000465534 MLXIPQ9HAP2 919 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 TBC1D7Q9P0N9 293 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 CLIP2Q9UDT6 1046 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 ZMAT5Q9UDW3 170 aaKnown RBP3.31□□□□□ -1.88
CD55-207ENST00000465534 TMCC3Q9ULS5 477 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 MAFFQ9ULX9 164 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 SHOC2Q9UQ13 582 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 N6AMT1Q9Y5N5 214 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 FRMPD3Q5JV73 1810 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 CACNA1DQ01668 2161 aa3.31□□□□□ -1.88
CD55-207ENST00000465534 KIAA1217Q5T5P2 1943 aa3.3□□□□□ -1.88
CD55-207ENST00000465534 NFAT5O94916 1531 aa3.3□□□□□ -1.88
CD55-207ENST00000465534 MYOM3Q5VTT5 1437 aa3.3□□□□□ -1.88
CD55-207ENST00000465534 ANKRD30AQ9BXX3 1397 aa3.3□□□□□ -1.88
CD55-207ENST00000465534 IBTKQ9P2D0 1353 aaPredicted RBP3.3□□□□□ -1.88
CD55-207ENST00000465534 MT-CO1P00395 513 aa3.3□□□□□ -1.88
CD55-207ENST00000465534 LDHCP07864 332 aa3.3□□□□□ -1.88
CD55-207ENST00000465534 MSNP26038 577 aaKnown RBP3.3□□□□□ -1.88
CD55-207ENST00000465534 CDC25AP30304 524 aa3.3□□□□□ -1.88
CD55-207ENST00000465534 CRKLP46109 303 aaKnown RBP3.3□□□□□ -1.88
CD55-207ENST00000465534 MASP1P48740 699 aa3.3□□□□□ -1.88
CD55-207ENST00000465534 RPS13P62277 151 aaKnown RBP3.3□□□□□ -1.88
CD55-207ENST00000465534 IGBP1P78318 339 aa3.3□□□□□ -1.88
CD55-207ENST00000465534 E2F1Q01094 437 aa3.3□□□□□ -1.88
CD55-207ENST00000465534 NSUN2Q08J23 767 aaKnown RBP eCLIP3.3□□□□□ -1.88
CD55-207ENST00000465534 PRPF4BQ13523 1007 aaKnown RBP3.3□□□□□ -1.88
CD55-207ENST00000465534 BECN1Q14457 450 aa3.3□□□□□ -1.88
CD55-207ENST00000465534 RBBP5Q15291 538 aaKnown RBP3.3□□□□□ -1.88
CD55-207ENST00000465534 ALDH1L2Q3SY69 923 aa3.3□□□□□ -1.88
CD55-207ENST00000465534 CCBE1Q6UXH8 406 aaPredicted RBP3.3□□□□□ -1.88
CD55-207ENST00000465534 PACS1Q6VY07 963 aa3.3□□□□□ -1.88
CD55-207ENST00000465534 CCDC80Q76M96 950 aa3.3□□□□□ -1.88
CD55-207ENST00000465534 BCDIN3DQ7Z5W3 292 aaKnown RBP3.3□□□□□ -1.88
CD55-207ENST00000465534 CAND1Q86VP6 1230 aaKnown RBP3.3□□□□□ -1.88
CD55-207ENST00000465534 SKAP1Q86WV1 359 aa3.3□□□□□ -1.88
CD55-207ENST00000465534 LRRC49Q8IUZ0 686 aa3.3□□□□□ -1.88
CD55-207ENST00000465534 CCDC105Q8IYK2 499 aa3.3□□□□□ -1.88
CD55-207ENST00000465534 PCSK9Q8NBP7 692 aaKnown RBP3.3□□□□□ -1.88
CD55-207ENST00000465534 CDK5RAP3Q96JB5 506 aa3.3□□□□□ -1.88
CD55-207ENST00000465534 MPP4Q96JB8 637 aa3.3□□□□□ -1.88
CD55-207ENST00000465534 MAP3K14Q99558 947 aa3.3□□□□□ -1.88
CD55-207ENST00000465534 RPAP3Q9H6T3 665 aaPredicted RBP3.3□□□□□ -1.88
CD55-207ENST00000465534 A1CFQ9NQ94 594 aaKnown RBP3.3□□□□□ -1.88
CD55-207ENST00000465534 TRMT13Q9NUP7 481 aaKnown RBP3.3□□□□□ -1.88
CD55-207ENST00000465534 DCAF16Q9NXF7 216 aa3.3□□□□□ -1.88
CD55-207ENST00000465534 ASIC5Q9NY37 505 aa3.3□□□□□ -1.88
CD55-207ENST00000465534 POLKQ9UBT6 870 aa3.3□□□□□ -1.88
CD55-207ENST00000465534 NARFQ9UHQ1 456 aa3.3□□□□□ -1.88
CD55-207ENST00000465534 GMEB2Q9UKD1 530 aa3.3□□□□□ -1.88
CD55-207ENST00000465534 AMFRQ9UKV5 643 aa3.3□□□□□ -1.88
CD55-207ENST00000465534 ASAP1Q9ULH1 1129 aa3.3□□□□□ -1.88
CD55-207ENST00000465534 SLC45A1Q9Y2W3 748 aa3.3□□□□□ -1.88
CD55-207ENST00000465534 IKBKGQ9Y6K9 419 aa3.3□□□□□ -1.88
CD55-207ENST00000465534 CHD7Q9P2D1 2997 aa3.3□□□□□ -1.88
CD55-207ENST00000465534 RLFQ13129 1914 aa3.3□□□□□ -1.88
CD55-207ENST00000465534 TRIM43BA6NCK2 446 aa3.29□□□□□ -1.88
CD55-207ENST00000465534 YDJCA8MPS7 323 aa3.29□□□□□ -1.88
CD55-207ENST00000465534 MYO1CO00159 1063 aa3.29□□□□□ -1.88
CD55-207ENST00000465534 CES2O00748 559 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms