RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 AP1G2O75843 785 aa14.23□□□□□ -0.13
HDAC6-215ENST00000465457 CYP17A1P05093 508 aa14.23□□□□□ -0.13
HDAC6-215ENST00000465457 ITGAVP06756 1048 aa14.23□□□□□ -0.13
HDAC6-215ENST00000465457 LCP1P13796 627 aa14.23□□□□□ -0.13
HDAC6-215ENST00000465457 ITIH2P19823 946 aa14.23□□□□□ -0.13
HDAC6-215ENST00000465457 ACAT1P24752 427 aaKnown RBP14.23□□□□□ -0.13
HDAC6-215ENST00000465457 MATKP42679 507 aa14.23□□□□□ -0.13
HDAC6-215ENST00000465457 AIF1P55008 147 aa14.23□□□□□ -0.13
HDAC6-215ENST00000465457 BYSLQ13895 437 aaKnown RBP14.23□□□□□ -0.13
HDAC6-215ENST00000465457 FAM171BQ6P995 826 aa14.23□□□□□ -0.13
HDAC6-215ENST00000465457 C4orf50Q6ZRC1 276 aa14.23□□□□□ -0.13
HDAC6-215ENST00000465457 ARFGAP1Q8N6T3 406 aa14.23□□□□□ -0.13
HDAC6-215ENST00000465457 FAM172AQ8WUF8 416 aa14.23□□□□□ -0.13
HDAC6-215ENST00000465457 IRGQQ8WZA9 623 aa14.23□□□□□ -0.13
HDAC6-215ENST00000465457 RAPGEF5Q92565 580 aa14.23□□□□□ -0.13
HDAC6-215ENST00000465457 ERLEC1Q96DZ1 483 aa14.23□□□□□ -0.13
HDAC6-215ENST00000465457 SNF8Q96H20 258 aa14.23□□□□□ -0.13
HDAC6-215ENST00000465457 CCDC114Q96M63 670 aa14.23□□□□□ -0.13
HDAC6-215ENST00000465457 B3GNT5Q9BYG0 378 aa14.23□□□□□ -0.13
HDAC6-215ENST00000465457 FOXP3Q9BZS1 431 aa14.23□□□□□ -0.13
HDAC6-215ENST00000465457 DPH5Q9H2P9 285 aa14.23□□□□□ -0.13
HDAC6-215ENST00000465457 CSNK1G1Q9HCP0 422 aa14.23□□□□□ -0.13
HDAC6-215ENST00000465457 CD93Q9NPY3 652 aa14.23□□□□□ -0.13
HDAC6-215ENST00000465457 ZMYM5Q9UJ78 669 aa14.23□□□□□ -0.13
HDAC6-215ENST00000465457 TMEM131Q92545 1883 aa14.23□□□□□ -0.13
HDAC6-215ENST00000465457 KNL1Q8NG31 2342 aa14.23□□□□□ -0.13
HDAC6-215ENST00000465457 APOC4-APOC2K7ER74 178 aa14.22□□□□□ -0.13
HDAC6-215ENST00000465457 ZNF189O75820 626 aaPredicted RBP14.22□□□□□ -0.13
HDAC6-215ENST00000465457 ENDOD1O94919 500 aa14.22□□□□□ -0.13
HDAC6-215ENST00000465457 APOC2P02655 101 aa14.22□□□□□ -0.13
HDAC6-215ENST00000465457 SERPINF2P08697 491 aa14.22□□□□□ -0.13
HDAC6-215ENST00000465457 TCF4P15884 667 aa14.22□□□□□ -0.13
HDAC6-215ENST00000465457 IL1R2P27930 398 aa14.22□□□□□ -0.13
HDAC6-215ENST00000465457 YWHAZP63104 245 aaKnown RBP14.22□□□□□ -0.13
HDAC6-215ENST00000465457 RPL6Q02878 288 aaKnown RBP14.22□□□□□ -0.13
HDAC6-215ENST00000465457 KDSRQ06136 332 aa14.22□□□□□ -0.13
HDAC6-215ENST00000465457 ADIGQ0VDE8 80 aa14.22□□□□□ -0.13
HDAC6-215ENST00000465457 KRT81Q14533 505 aa14.22□□□□□ -0.13
HDAC6-215ENST00000465457 SLMAPQ14BN4 828 aa14.22□□□□□ -0.13
HDAC6-215ENST00000465457 DUOXA1Q1HG43 343 aa14.22□□□□□ -0.13
HDAC6-215ENST00000465457 SLC25A52Q3SY17 297 aa14.22□□□□□ -0.13
HDAC6-215ENST00000465457 RAB41Q5JT25 222 aa14.22□□□□□ -0.13
HDAC6-215ENST00000465457 LRIG3Q6UXM1 1119 aa14.22□□□□□ -0.13
HDAC6-215ENST00000465457 PAQR9Q6ZVX9 377 aa14.22□□□□□ -0.13
HDAC6-215ENST00000465457 SLC41A1Q8IVJ1 513 aa14.22□□□□□ -0.13
HDAC6-215ENST00000465457 PCED1BQ96HM7 432 aa14.22□□□□□ -0.13
HDAC6-215ENST00000465457 ZNF670Q9BS34 389 aa14.22□□□□□ -0.13
HDAC6-215ENST00000465457 MAK16Q9BXY0 300 aaKnown RBP14.22□□□□□ -0.13
HDAC6-215ENST00000465457 DMAP1Q9NPF5 467 aaPredicted RBP14.22□□□□□ -0.13
HDAC6-215ENST00000465457 SCUBE2Q9NQ36 999 aa14.22□□□□□ -0.13
HDAC6-215ENST00000465457 ZDHHC18Q9NUE0 388 aa14.22□□□□□ -0.13
HDAC6-215ENST00000465457 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.22□□□□□ -0.13
HDAC6-215ENST00000465457 KLHL11Q9NVR0 708 aa14.22□□□□□ -0.13
HDAC6-215ENST00000465457 GRHL1Q9NZI5 618 aa14.22□□□□□ -0.13
HDAC6-215ENST00000465457 RCOR3Q9P2K3 495 aaPredicted RBP14.22□□□□□ -0.13
HDAC6-215ENST00000465457 ASIC3Q9UHC3 531 aa14.22□□□□□ -0.13
HDAC6-215ENST00000465457 PCSK1NQ9UHG2 260 aa14.22□□□□□ -0.13
HDAC6-215ENST00000465457 MYO18BQ8IUG5 2567 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 TRAV19A0A0A6YYK7 116 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 ARHGAP33O14559 1287 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 ATP2C2O75185 946 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 PPFIA2O75334 1257 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 GABBR2O75899 941 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 ALDH1A2O94788 518 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 ZFXP17010 805 aaPredicted RBP14.21□□□□□ -0.13
HDAC6-215ENST00000465457 CYP2F1P24903 491 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 NOS2P35228 1153 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 KIR2DL1P43626 348 aaPredicted RBP14.21□□□□□ -0.13
HDAC6-215ENST00000465457 CDH6P55285 790 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 SMTNL2Q2TAL5 461 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 ATP13A4Q4VNC1 1196 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 KAZNQ674X7 775 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 TXNRD3NBQ6F5E7 133 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 TRNP1Q6NT89 227 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 BEND5Q7L4P6 421 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 GSTA5Q7RTV2 222 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 TMC3Q7Z5M5 1100 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 CROCCP2Q86T23 111 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 NAXDQ8IW45 347 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 DCP1BQ8IZD4 617 aaKnown RBP14.21□□□□□ -0.13
HDAC6-215ENST00000465457 PGBD3Q8N328 593 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.21□□□□□ -0.13
HDAC6-215ENST00000465457 C2orf15Q8WU43 125 aaKnown RBP14.21□□□□□ -0.13
HDAC6-215ENST00000465457 ART4Q93070 314 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 MYLPFQ96A32 169 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 EXOC4Q96A65 974 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 PIWIL1Q96J94 861 aaKnown RBP14.21□□□□□ -0.13
HDAC6-215ENST00000465457 CFAP57Q96MR6 1250 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 SLC2A13Q96QE2 648 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 PKMYT1Q99640 499 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 HERPUD2Q9BSE4 406 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 TRIM31Q9BZY9 425 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 POPDC2Q9HBU9 364 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 DNAAF2Q9NVR5 837 aaKnown RBP14.21□□□□□ -0.13
HDAC6-215ENST00000465457 R3HDM2Q9Y2K5 976 aaKnown RBP14.21□□□□□ -0.13
HDAC6-215ENST00000465457 SNX24Q9Y343 169 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 PCDHB5Q9Y5E4 795 aa14.21□□□□□ -0.13
HDAC6-215ENST00000465457 HECTD1Q9ULT8 2610 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 GOLGA8KD6RF30 607 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 SMAPO00193 183 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms